RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 CPSF2Q9P2I0 782 aaKnown RBP8.17□□□□□ -1.1
SYNE2-209ENST00000553308 PROCRQ9UNN8 238 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 ACOT9Q9Y305 439 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 USF3Q68DE3 2245 aa8.17□□□□□ -1.1
SYNE2-209ENST00000553308 ATRQ13535 2644 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 H3BML4 177 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 ABCB7O75027 752 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 TNFRSF21O75509 655 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 AQP8O94778 261 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 CTAGE8P0CG41 777 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 CT45A8P0DMV1 189 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 CT45A9P0DMV2 189 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 CR1P17927 2039 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 HK1P19367 917 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 KRT20P35900 424 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 ALDH9A1P49189 494 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 CCNG1P51959 295 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 CLDN20P56880 219 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 GALNT1Q10472 559 aaPredicted RBP8.16□□□□□ -1.1
SYNE2-209ENST00000553308 TRAF3Q13114 568 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 STX5Q13190 355 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 EFR3AQ14156 821 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 CLEC12BQ2HXU8 276 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 CT45A2Q5DJT8 189 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 ZNF628Q5EBL2 1059 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 SGO1Q5FBB7 561 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 C10orf62Q5T681 223 aaPredicted RBP8.16□□□□□ -1.1
SYNE2-209ENST00000553308 TTC19Q6DKK2 380 aaPredicted RBP8.16□□□□□ -1.1
SYNE2-209ENST00000553308 SH2D5Q6ZV89 423 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 CYS1Q717R9 158 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 FAM214BQ7L5A3 538 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 WFDC8Q8IUA0 241 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 CREG2Q8IUH2 290 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 CTAGE4Q8IX94 777 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 ZNF611Q8N823 705 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 GBP7Q8N8V2 638 aaPredicted RBP8.16□□□□□ -1.1
SYNE2-209ENST00000553308 FADS6Q8N9I5 356 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 OR2M3Q8NG83 312 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 OR4N2Q8NGD1 307 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 KAT2AQ92830 837 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 ATP6V1E2Q96A05 226 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 EFHD2Q96C19 240 aaPredicted RBP8.16□□□□□ -1.1
SYNE2-209ENST00000553308 TM4SF18Q96CE8 201 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 PLPPR2Q96GM1 343 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 NSUN5Q96P11 429 aaKnown RBP8.16□□□□□ -1.1
SYNE2-209ENST00000553308 DPH5Q9H2P9 285 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 FARSBQ9NSD9 589 aaKnown RBP8.16□□□□□ -1.1
SYNE2-209ENST00000553308 AHSPQ9NZD4 102 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 SLC12A4Q9UP95 1085 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 LAMP3Q9UQV4 416 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 ZNF337Q9Y3M9 751 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 ZNF175Q9Y473 711 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 STAB1Q9NY15 2570 aa8.16□□□□□ -1.1
SYNE2-209ENST00000553308 SONP18583 2426 aaKnown RBP8.15□□□□□ -1.1
SYNE2-209ENST00000553308 OR2M5A3KFT3 312 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 EIF3HO15372 352 aaKnown RBP eCLIP8.15□□□□□ -1.1
SYNE2-209ENST00000553308 TMCC2O75069 709 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 GUCY1B2O75343 617 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 C2P06681 752 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 PPP3CBP16298 524 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 EVI2BP34910 448 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 SLC6A8P48029 635 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 PNLIPRP2P54317 469 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 EEFSECP57772 596 aaKnown RBP8.15□□□□□ -1.1
SYNE2-209ENST00000553308 RPS4XP62701 263 aaKnown RBP8.15□□□□□ -1.1
SYNE2-209ENST00000553308 IFT88Q13099 833 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 FGFBP1Q14512 234 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 ACAP2Q15057 778 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 FAM83EQ2M2I3 478 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 PODNL1Q6PEZ8 512 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 STAC2Q6ZMT1 411 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 RPS27LQ71UM5 84 aaKnown RBP8.15□□□□□ -1.1
SYNE2-209ENST00000553308 SLC44A2Q8IWA5 706 aaPredicted RBP8.15□□□□□ -1.1
SYNE2-209ENST00000553308 METTL25Q8N6Q8 603 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 PTGR2Q8N8N7 351 aaPredicted RBP8.15□□□□□ -1.1
SYNE2-209ENST00000553308 OR9A2Q8NGT5 310 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 RAB3IL1Q8TBN0 382 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 ZNF675Q8TD23 568 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 TRPC4APQ8TEL6 797 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 FBF1Q8TES7 1133 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 AKAP1Q92667 903 aaKnown RBP eCLIP8.15□□□□□ -1.1
SYNE2-209ENST00000553308 PHF21BQ96EK2 531 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 VSTM2LQ96N03 204 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 GPR78Q96P69 363 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 TMEM204Q9BSN7 226 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 REG4Q9BYZ8 158 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 RTN4RQ9BZR6 473 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 FOLH1BQ9HBA9 442 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 ZBTB26Q9HCK0 441 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 PFDN4Q9NQP4 134 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 YAE1D1Q9NRH1 226 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 FLRT3Q9NZU0 649 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 MED11Q9P086 117 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 UTS2RQ9UKP6 389 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 CLEC4AQ9UMR7 237 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 TNPO3Q9Y5L0 923 aaKnown RBP8.15□□□□□ -1.1
SYNE2-209ENST00000553308 ZNF780BQ9Y6R6 833 aa8.15□□□□□ -1.1
SYNE2-209ENST00000553308 ROS1P08922 2347 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 UQCRHLA0A096LP55 91 aa8.14□□□□□ -1.11
SYNE2-209ENST00000553308 A0A096LPK6 155 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms