RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 HYAL4Q2M3T9 481 aa16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 SLC9B1Q4ZJI4 515 aa16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 ANXA8L1Q5VT79 327 aa16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 C1QL3Q5VWW1 255 aa16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 SLC30A6Q6NXT4 461 aa16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 ARHGAP11AQ6P4F7 1023 aa16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 BHLHB9Q6PI77 547 aa16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 OR4N2Q8NGD1 307 aa16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 OR8J2Q8NGG1 315 aa16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 FBXO30Q8TB52 745 aa16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 SFXN5Q8TD22 340 aa16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 NUDT8Q8WV74 236 aa16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 CKAP2Q8WWK9 683 aa16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 TESCQ96BS2 214 aa16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 MOAP1Q96BY2 351 aa16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 MAELQ96JY0 434 aaKnown RBP16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 NODALQ96S42 347 aa16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 LDAHQ9H6V9 325 aa16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 EXO5Q9H790 373 aa16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 ZNF703Q9H7S9 590 aaPredicted RBP16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 ZDHHC11Q9H8X9 412 aa16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 PROK2Q9HC23 129 aa16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 SIRT3Q9NTG7 399 aaPredicted RBP16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 NTMQ9P121 344 aa16.94■□□□□ 0.3
PRPF40B-216ENST00000552301 LRRC3CA6NJW4 275 aa16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 RNASET2O00584 256 aaKnown RBP16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 LRRTM2O43300 516 aa16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 TSPAN2O60636 221 aa16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 SEMA7AO75326 666 aa16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 TRIM3O75382 744 aaPredicted RBP16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 WISP2O76076 250 aa16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 PDE9AO76083 593 aa16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 KRT16P08779 473 aa16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 ALOX5P09917 674 aa16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 GDF1P27539 372 aa16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 SNTA1Q13424 505 aa16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 GAB1Q13480 694 aa16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 LASP1Q14847 261 aaKnown RBP16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 SLC10A1Q14973 349 aa16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 FAM174BQ3ZCQ3 159 aa16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 DESI1Q6ICB0 168 aa16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 MFSD12Q6NUT3 480 aa16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 TMEM81Q6P7N7 255 aa16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 ZCCHC12Q6PEW1 402 aa16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 ANGPTL8Q6UXH0 198 aa16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 MAVSQ7Z434 540 aa16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 SPPL2CQ8IUH8 684 aa16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 ARFGAP2Q8N6H7 521 aa16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 OR4A15Q8NGL6 344 aa16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 RMND5BQ96G75 393 aaPredicted RBP16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 TMEM41AQ96HV5 264 aa16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 SUCOQ9UBS9 1254 aaKnown RBP16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 ERRFI1Q9UJM3 462 aaPredicted RBP16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 FAF1Q9UNN5 650 aaPredicted RBP16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 NUP214P35658 2090 aaPredicted RBP16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 DIDO1Q9BTC0 2240 aaKnown RBP16.93■□□□□ 0.3
PRPF40B-216ENST00000552301 DNAJC13O75165 2243 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 ZNF407Q9C0G0 2248 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 A0A1B0GTH9 108 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 CLEC18AA5D8T8 446 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 PRRG2O14669 202 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 GNB5O14775 395 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 ANKRD28O15084 1053 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 UBDO15205 165 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 TGDSO95455 350 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 ELAVL4P26378 380 aaKnown RBP16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 PTGS2P35354 604 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 UFM1P61960 85 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 HBA1P69905 142 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 GTF3C1Q12789 2109 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 TOMM20Q15388 145 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 GSTA3Q16772 222 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 SPANXN4Q5MJ08 99 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 CLEC18BQ6UXF7 455 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 FJX1Q86VR8 437 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 COX18Q8N8Q8 333 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 CLEC18CQ8NCF0 446 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 OR1J4Q8NGS1 313 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 PSMA8Q8TAA3 256 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 SSC4DQ8WTU2 575 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 DTNBP1Q96EV8 351 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 GIMAP5Q96F15 307 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 MARK4Q96L34 752 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 OR52B2Q96RD2 323 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 YIPF4Q9BSR8 244 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 CXorf36Q9H7Y0 433 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 TCF7L2Q9NQB0 619 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 FAM120CQ9NX05 1096 aaKnown RBP16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 QPCTLQ9NXS2 382 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 GPR45Q9Y5Y3 372 aa16.92■□□□□ 0.3
PRPF40B-216ENST00000552301 DOPEY2Q9Y3R5 2298 aa16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 PRSS51A0A1B0GVH4 220 aa16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 ZNF195O14628 629 aa16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 ICOSLGO75144 302 aa16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 TRAPPC6AO75865 159 aa16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 NKX2-2O95096 273 aa16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 CPSF4O95639 269 aaKnown RBP16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 IL33O95760 270 aa16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 HMGN2P05204 90 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms