RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 ZNF75DP51815 510 aa13.68□□□□□ -0.22
CACNB3-220ENST00000551716 MGAT5Q09328 741 aa13.68□□□□□ -0.22
CACNB3-220ENST00000551716 MGAT2Q10469 447 aa13.68□□□□□ -0.22
CACNB3-220ENST00000551716 MSS51Q4VC12 460 aa13.68□□□□□ -0.22
CACNB3-220ENST00000551716 UBAP2Q5T6F2 1119 aaKnown RBP13.68□□□□□ -0.22
CACNB3-220ENST00000551716 AGAP6Q5VW22 663 aa13.68□□□□□ -0.22
CACNB3-220ENST00000551716 LIPJQ5W064 366 aa13.68□□□□□ -0.22
CACNB3-220ENST00000551716 GTF2IRD2BQ6EKJ0 949 aa13.68□□□□□ -0.22
CACNB3-220ENST00000551716 BHLHB9Q6PI77 547 aa13.68□□□□□ -0.22
CACNB3-220ENST00000551716 GTF2IRD2Q86UP8 949 aa13.68□□□□□ -0.22
CACNB3-220ENST00000551716 DTX2Q86UW9 622 aa13.68□□□□□ -0.22
CACNB3-220ENST00000551716 LRRC39Q96DD0 335 aa13.68□□□□□ -0.22
CACNB3-220ENST00000551716 NAP1L3Q99457 506 aaPredicted RBP13.68□□□□□ -0.22
CACNB3-220ENST00000551716 RHOJQ9H4E5 214 aa13.68□□□□□ -0.22
CACNB3-220ENST00000551716 PLAC1Q9HBJ0 212 aa13.68□□□□□ -0.22
CACNB3-220ENST00000551716 CISD1Q9NZ45 108 aaKnown RBP13.68□□□□□ -0.22
CACNB3-220ENST00000551716 PPP4R1LQ9P1A2 415 aa13.68□□□□□ -0.22
CACNB3-220ENST00000551716 ZNF639Q9UID6 485 aa13.68□□□□□ -0.22
CACNB3-220ENST00000551716 PSME2Q9UL46 239 aa13.68□□□□□ -0.22
CACNB3-220ENST00000551716 PSAT1Q9Y617 370 aa13.68□□□□□ -0.22
CACNB3-220ENST00000551716 H0YC42 278 aa13.67□□□□□ -0.22
CACNB3-220ENST00000551716 H0YIV9 168 aa13.67□□□□□ -0.22
CACNB3-220ENST00000551716 FOXE1O00358 373 aaPredicted RBP13.67□□□□□ -0.22
CACNB3-220ENST00000551716 AQP8O94778 261 aa13.67□□□□□ -0.22
CACNB3-220ENST00000551716 CD8AP01732 235 aa13.67□□□□□ -0.22
CACNB3-220ENST00000551716 CD1DP15813 335 aa13.67□□□□□ -0.22
CACNB3-220ENST00000551716 IL12BP29460 328 aa13.67□□□□□ -0.22
CACNB3-220ENST00000551716 CXCR5P32302 372 aa13.67□□□□□ -0.22
CACNB3-220ENST00000551716 GZMKP49863 264 aa13.67□□□□□ -0.22
CACNB3-220ENST00000551716 PNLIPRP2P54317 469 aa13.67□□□□□ -0.22
CACNB3-220ENST00000551716 TPD52P55327 224 aaPredicted RBP13.67□□□□□ -0.22
CACNB3-220ENST00000551716 CLDN20P56880 219 aa13.67□□□□□ -0.22
CACNB3-220ENST00000551716 OR4D1Q15615 310 aa13.67□□□□□ -0.22
CACNB3-220ENST00000551716 CTU2Q2VPK5 515 aaKnown RBP13.67□□□□□ -0.22
CACNB3-220ENST00000551716 STEAP4Q687X5 459 aa13.67□□□□□ -0.22
CACNB3-220ENST00000551716 C12orf54Q6X4T0 127 aa13.67□□□□□ -0.22
CACNB3-220ENST00000551716 MYLK4Q86YV6 388 aaPredicted RBP13.67□□□□□ -0.22
CACNB3-220ENST00000551716 RNF175Q8N4F7 328 aa13.67□□□□□ -0.22
CACNB3-220ENST00000551716 SPATA6LQ8N4H0 392 aa13.67□□□□□ -0.22
CACNB3-220ENST00000551716 FADS6Q8N9I5 356 aa13.67□□□□□ -0.22
CACNB3-220ENST00000551716 STAG3L4Q8TBR4 150 aa13.67□□□□□ -0.22
CACNB3-220ENST00000551716 PROX1Q92786 737 aa13.67□□□□□ -0.22
CACNB3-220ENST00000551716 S100PBPQ96BU1 408 aa13.67□□□□□ -0.22
CACNB3-220ENST00000551716 DSN1Q9H410 356 aa13.67□□□□□ -0.22
CACNB3-220ENST00000551716 AHSPQ9NZD4 102 aa13.67□□□□□ -0.22
CACNB3-220ENST00000551716 MAT2BQ9NZL9 334 aa13.67□□□□□ -0.22
CACNB3-220ENST00000551716 KCNS2Q9ULS6 477 aa13.67□□□□□ -0.22
CACNB3-220ENST00000551716 B3GALT5Q9Y2C3 310 aa13.67□□□□□ -0.22
CACNB3-220ENST00000551716 PLLPQ9Y342 182 aa13.67□□□□□ -0.22
CACNB3-220ENST00000551716 OR2M5A3KFT3 312 aa13.66□□□□□ -0.22
CACNB3-220ENST00000551716 H3BML4 177 aa13.66□□□□□ -0.22
CACNB3-220ENST00000551716 UGDHO60701 494 aa13.66□□□□□ -0.22
CACNB3-220ENST00000551716 SEMA3DO95025 777 aa13.66□□□□□ -0.22
CACNB3-220ENST00000551716 ELK3P41970 407 aa13.66□□□□□ -0.22
CACNB3-220ENST00000551716 GAS1P54826 345 aa13.66□□□□□ -0.22
CACNB3-220ENST00000551716 EXOSC7Q15024 291 aaKnown RBP13.66□□□□□ -0.22
CACNB3-220ENST00000551716 PPP1R7Q15435 360 aa13.66□□□□□ -0.22
CACNB3-220ENST00000551716 FAM166AQ6J272 317 aa13.66□□□□□ -0.22
CACNB3-220ENST00000551716 FAM111BQ6SJ93 734 aa13.66□□□□□ -0.22
CACNB3-220ENST00000551716 LARP4Q71RC2 724 aaKnown RBP eCLIP13.66□□□□□ -0.22
CACNB3-220ENST00000551716 SSX8Q7RTT4 187 aa13.66□□□□□ -0.22
CACNB3-220ENST00000551716 TRIM58Q8NG06 486 aa13.66□□□□□ -0.22
CACNB3-220ENST00000551716 OR52R1Q8NGF1 315 aa13.66□□□□□ -0.22
CACNB3-220ENST00000551716 RNF138Q8WVD3 245 aa13.66□□□□□ -0.22
CACNB3-220ENST00000551716 SERPINI1Q99574 410 aa13.66□□□□□ -0.22
CACNB3-220ENST00000551716 TRIM2Q9C040 744 aa13.66□□□□□ -0.22
CACNB3-220ENST00000551716 NUDT4Q9NZJ9 180 aa13.66□□□□□ -0.22
CACNB3-220ENST00000551716 ADAM29Q9UKF5 820 aa13.66□□□□□ -0.22
CACNB3-220ENST00000551716 MCTS1Q9ULC4 181 aaKnown RBP13.66□□□□□ -0.22
CACNB3-220ENST00000551716 ANGPTL3Q9Y5C1 460 aa13.66□□□□□ -0.22
CACNB3-220ENST00000551716 C1orf226A1L170 272 aa13.65□□□□□ -0.22
CACNB3-220ENST00000551716 DNALI1O14645 258 aaPredicted RBP13.65□□□□□ -0.22
CACNB3-220ENST00000551716 TSPAN2O60636 221 aa13.65□□□□□ -0.22
CACNB3-220ENST00000551716 SIX3O95343 332 aaPredicted RBP13.65□□□□□ -0.22
CACNB3-220ENST00000551716 WISP3O95389 354 aaPredicted RBP13.65□□□□□ -0.22
CACNB3-220ENST00000551716 CBX7O95931 251 aa13.65□□□□□ -0.22
CACNB3-220ENST00000551716 USF1P22415 310 aaPredicted RBP13.65□□□□□ -0.22
CACNB3-220ENST00000551716 IL32P24001 234 aa13.65□□□□□ -0.22
CACNB3-220ENST00000551716 EMDP50402 254 aa13.65□□□□□ -0.22
CACNB3-220ENST00000551716 SRSF2Q01130 221 aaKnown RBP13.65□□□□□ -0.22
CACNB3-220ENST00000551716 ZNF844Q08AG5 666 aa13.65□□□□□ -0.22
CACNB3-220ENST00000551716 RAB35Q15286 201 aa13.65□□□□□ -0.22
CACNB3-220ENST00000551716 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.65□□□□□ -0.22
CACNB3-220ENST00000551716 FAM120AOSQ5T036 256 aa13.65□□□□□ -0.22
CACNB3-220ENST00000551716 PPP4R4Q6NUP7 873 aa13.65□□□□□ -0.22
CACNB3-220ENST00000551716 PAGE2Q7Z2X7 111 aa13.65□□□□□ -0.22
CACNB3-220ENST00000551716 MEX3DQ86XN8 651 aaKnown RBP13.65□□□□□ -0.22
CACNB3-220ENST00000551716 RFLNBQ8N5W9 214 aa13.65□□□□□ -0.22
CACNB3-220ENST00000551716 ARIH2OSQ8N7S6 290 aa13.65□□□□□ -0.22
CACNB3-220ENST00000551716 OR2M3Q8NG83 312 aa13.65□□□□□ -0.22
CACNB3-220ENST00000551716 OR52B6Q8NGF0 335 aa13.65□□□□□ -0.22
CACNB3-220ENST00000551716 PIWIL2Q8TC59 973 aaKnown RBP13.65□□□□□ -0.22
CACNB3-220ENST00000551716 TRPC4APQ8TEL6 797 aa13.65□□□□□ -0.22
CACNB3-220ENST00000551716 UBTD2Q8WUN7 234 aa13.65□□□□□ -0.22
CACNB3-220ENST00000551716 NEUROG1Q92886 237 aa13.65□□□□□ -0.22
CACNB3-220ENST00000551716 ERP27Q96DN0 273 aa13.65□□□□□ -0.22
CACNB3-220ENST00000551716 RADILQ96JH8 1075 aa13.65□□□□□ -0.22
CACNB3-220ENST00000551716 BTBD9Q96Q07 612 aa13.65□□□□□ -0.22
CACNB3-220ENST00000551716 DDX47Q9H0S4 455 aaKnown RBP13.65□□□□□ -0.22
CACNB3-220ENST00000551716 SAYSD1Q9NPB0 183 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms