RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 DUSP5Q16690 384 aa12.6□□□□□ -0.39
TROAP-213ENST00000550709 DECR1Q16698 335 aa12.6□□□□□ -0.39
TROAP-213ENST00000550709 GSTA3Q16772 222 aa12.6□□□□□ -0.39
TROAP-213ENST00000550709 VPS26BQ4G0F5 336 aa12.6□□□□□ -0.39
TROAP-213ENST00000550709 PDCD4Q53EL6 469 aaKnown RBP12.6□□□□□ -0.39
TROAP-213ENST00000550709 PAOXQ6QHF9 649 aa12.6□□□□□ -0.39
TROAP-213ENST00000550709 SLC22A16Q86VW1 577 aa12.6□□□□□ -0.39
TROAP-213ENST00000550709 MIER2Q8N344 545 aa12.6□□□□□ -0.39
TROAP-213ENST00000550709 TMEM251Q8N6I4 163 aa12.6□□□□□ -0.39
TROAP-213ENST00000550709 CDRT4Q8N9R6 151 aa12.6□□□□□ -0.39
TROAP-213ENST00000550709 VPS37AQ8NEZ2 397 aa12.6□□□□□ -0.39
TROAP-213ENST00000550709 OR56A1Q8NGH5 318 aa12.6□□□□□ -0.39
TROAP-213ENST00000550709 OR52N2Q8NGI0 321 aa12.6□□□□□ -0.39
TROAP-213ENST00000550709 OR9I1Q8NGQ6 314 aa12.6□□□□□ -0.39
TROAP-213ENST00000550709 PSMA8Q8TAA3 256 aa12.6□□□□□ -0.39
TROAP-213ENST00000550709 TMCO6Q96DC7 493 aa12.6□□□□□ -0.39
TROAP-213ENST00000550709 OR52E6Q96RD3 313 aa12.6□□□□□ -0.39
TROAP-213ENST00000550709 SECISBP2Q96T21 854 aaKnown RBP12.6□□□□□ -0.39
TROAP-213ENST00000550709 IL1RL2Q9HB29 575 aa12.6□□□□□ -0.39
TROAP-213ENST00000550709 GALNT9Q9HCQ5 603 aa12.6□□□□□ -0.39
TROAP-213ENST00000550709 NEUROD4Q9HD90 331 aa12.6□□□□□ -0.39
TROAP-213ENST00000550709 ZFP64Q9NPA5 681 aa12.6□□□□□ -0.39
TROAP-213ENST00000550709 KLRF1Q9NZS2 232 aa12.6□□□□□ -0.39
TROAP-213ENST00000550709 BOKQ9UMX3 212 aaPredicted RBP12.6□□□□□ -0.39
TROAP-213ENST00000550709 FAF1Q9UNN5 650 aaPredicted RBP12.6□□□□□ -0.39
TROAP-213ENST00000550709 CROCCQ5TZA2 2017 aa12.6□□□□□ -0.39
TROAP-213ENST00000550709 A0A0G2JND7 137 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 ANKRD33BA6NCL7 494 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 LRRC3CA6NJW4 275 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 ACOT7O00154 380 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 GNB5O14775 395 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 SCN2BO60939 215 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 ABCB7O75027 752 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 ICOSLGO75144 302 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 GLSO94925 669 aaPredicted RBP12.59□□□□□ -0.39
TROAP-213ENST00000550709 ZIC2O95409 532 aaPredicted RBP12.59□□□□□ -0.39
TROAP-213ENST00000550709 PGRP06401 933 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 CELA3AP09093 270 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 RFPL3SP0C7P2 107 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 CYP4B1P13584 511 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 MAGEA5P43359 124 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 PRIM2P49643 509 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 CASP9P55211 416 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 STX1BP61266 288 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 RPS26P62854 115 aaKnown RBP12.59□□□□□ -0.39
TROAP-213ENST00000550709 MRPS22P82650 360 aaKnown RBP12.59□□□□□ -0.39
TROAP-213ENST00000550709 EFR3AQ14156 821 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 DPY19L1Q2PZI1 675 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 KRTCAP3Q53RY4 240 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 CMPK2Q5EBM0 449 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 TBCELQ5QJ74 424 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 PACS2Q86VP3 889 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 COX18Q8N8Q8 333 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 SFXN5Q8TD22 340 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 SLC35A4Q96G79 324 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 ZNF597Q96LX8 424 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 INPP5KQ9BT40 448 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 CCDC28BQ9BUN5 200 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 OSBPL11Q9BXB4 747 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 ANGPTL4Q9BY76 406 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 SDR39U1Q9NRG7 319 aaPredicted RBP12.59□□□□□ -0.39
TROAP-213ENST00000550709 FGFR1OP2Q9NVK5 253 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 FAM120CQ9NX05 1096 aaKnown RBP12.59□□□□□ -0.39
TROAP-213ENST00000550709 FLRT3Q9NZU0 649 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 ZIM2Q9NZV7 527 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 SH3BGRL2Q9UJC5 107 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 MYO18BQ8IUG5 2567 aa12.59□□□□□ -0.39
TROAP-213ENST00000550709 RELNP78509 3460 aa12.58□□□□□ -0.39
TROAP-213ENST00000550709 RNF103-CHMP3A0A140T963 221 aa12.58□□□□□ -0.4
TROAP-213ENST00000550709 TTC36A6NLP5 189 aa12.58□□□□□ -0.4
TROAP-213ENST00000550709 SCO2O43819 266 aa12.58□□□□□ -0.4
TROAP-213ENST00000550709 TRIM3O75382 744 aaPredicted RBP12.58□□□□□ -0.4
TROAP-213ENST00000550709 NKX2-2O95096 273 aa12.58□□□□□ -0.4
TROAP-213ENST00000550709 SNX4O95219 450 aa12.58□□□□□ -0.4
TROAP-213ENST00000550709 KCNH1O95259 989 aa12.58□□□□□ -0.4
TROAP-213ENST00000550709 IL33O95760 270 aa12.58□□□□□ -0.4
TROAP-213ENST00000550709 IGKV1D-16P01601 117 aa12.58□□□□□ -0.4
TROAP-213ENST00000550709 NCF2P19878 526 aaPredicted RBP12.58□□□□□ -0.4
TROAP-213ENST00000550709 POLR2JP52435 117 aaKnown RBP12.58□□□□□ -0.4
TROAP-213ENST00000550709 PNLIPRP2P54317 469 aa12.58□□□□□ -0.4
TROAP-213ENST00000550709 PSPHP78330 225 aa12.58□□□□□ -0.4
TROAP-213ENST00000550709 SLC10A1Q14973 349 aa12.58□□□□□ -0.4
TROAP-213ENST00000550709 CCNJQ5T5M9 372 aa12.58□□□□□ -0.4
TROAP-213ENST00000550709 FIGNL1Q6PIW4 674 aa12.58□□□□□ -0.4
TROAP-213ENST00000550709 ANGPTL8Q6UXH0 198 aa12.58□□□□□ -0.4
TROAP-213ENST00000550709 C6orf120Q7Z4R8 191 aa12.58□□□□□ -0.4
TROAP-213ENST00000550709 GHDCQ8N2G8 530 aa12.58□□□□□ -0.4
TROAP-213ENST00000550709 GLB1L3Q8NCI6 653 aaPredicted RBP12.58□□□□□ -0.4
TROAP-213ENST00000550709 CDS1Q92903 461 aa12.58□□□□□ -0.4
TROAP-213ENST00000550709 GNRHR2Q96P88 292 aa12.58□□□□□ -0.4
TROAP-213ENST00000550709 ACTRT3Q9BYD9 372 aa12.58□□□□□ -0.4
TROAP-213ENST00000550709 GPATCH2Q9NW75 528 aa12.58□□□□□ -0.4
TROAP-213ENST00000550709 MRTO4Q9UKD2 239 aaKnown RBP12.58□□□□□ -0.4
TROAP-213ENST00000550709 SHANK1Q9Y566 2161 aa12.58□□□□□ -0.4
TROAP-213ENST00000550709 KCNE3Q9Y6H6 103 aa12.58□□□□□ -0.4
TROAP-213ENST00000550709 TRGV8A0A0C4DH27 118 aa12.57□□□□□ -0.4
TROAP-213ENST00000550709 A0A1B0GTH9 108 aa12.57□□□□□ -0.4
TROAP-213ENST00000550709 CCDC154A6NI56 674 aa12.57□□□□□ -0.4
TROAP-213ENST00000550709 TRAPPC6AO75865 159 aa12.57□□□□□ -0.4
TROAP-213ENST00000550709 UTS2O95399 124 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms