RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 TAS2R9Q9NYW1 312 aa12.28□□□□□ -0.44
TROAP-211ENST00000549891 SENP1Q9P0U3 644 aa12.28□□□□□ -0.44
TROAP-211ENST00000549891 PPP4R1LQ9P1A2 415 aa12.28□□□□□ -0.44
TROAP-211ENST00000549891 TRPS1Q9UHF7 1281 aa12.28□□□□□ -0.44
TROAP-211ENST00000549891 MCM8Q9UJA3 840 aa12.28□□□□□ -0.44
TROAP-211ENST00000549891 LINC01387J3KSC0 135 aa12.27□□□□□ -0.45
TROAP-211ENST00000549891 ZIC3O60481 467 aa12.27□□□□□ -0.45
TROAP-211ENST00000549891 LY6G6DO95868 133 aa12.27□□□□□ -0.45
TROAP-211ENST00000549891 KRT6AP02538 564 aa12.27□□□□□ -0.45
TROAP-211ENST00000549891 KRT6BP04259 564 aa12.27□□□□□ -0.45
TROAP-211ENST00000549891 RPS17P08708 135 aaKnown RBP12.27□□□□□ -0.45
TROAP-211ENST00000549891 CT45A8P0DMV1 189 aa12.27□□□□□ -0.45
TROAP-211ENST00000549891 CT45A9P0DMV2 189 aa12.27□□□□□ -0.45
TROAP-211ENST00000549891 POU2F1P14859 743 aa12.27□□□□□ -0.45
TROAP-211ENST00000549891 CRYGSP22914 178 aa12.27□□□□□ -0.45
TROAP-211ENST00000549891 UGT2B10P36537 528 aa12.27□□□□□ -0.45
TROAP-211ENST00000549891 MAGEA12P43365 314 aa12.27□□□□□ -0.45
TROAP-211ENST00000549891 KCNJ5P48544 419 aa12.27□□□□□ -0.45
TROAP-211ENST00000549891 KRT6CP48668 564 aa12.27□□□□□ -0.45
TROAP-211ENST00000549891 SERPINB9P50453 376 aa12.27□□□□□ -0.45
TROAP-211ENST00000549891 CSTF3Q12996 717 aaKnown RBP12.27□□□□□ -0.45
TROAP-211ENST00000549891 GANABQ14697 944 aaKnown RBP12.27□□□□□ -0.45
TROAP-211ENST00000549891 HEPACAMQ14CZ8 416 aa12.27□□□□□ -0.45
TROAP-211ENST00000549891 ACKR1Q16570 336 aa12.27□□□□□ -0.45
TROAP-211ENST00000549891 CT45A2Q5DJT8 189 aa12.27□□□□□ -0.45
TROAP-211ENST00000549891 FAM180BQ6P0A1 224 aa12.27□□□□□ -0.45
TROAP-211ENST00000549891 LETMD1Q6P1Q0 360 aa12.27□□□□□ -0.45
TROAP-211ENST00000549891 C20orf204Q6ZNR8 217 aa12.27□□□□□ -0.45
TROAP-211ENST00000549891 UBQLNLQ8IYU4 475 aa12.27□□□□□ -0.45
TROAP-211ENST00000549891 ZNF483Q8TF39 744 aaPredicted RBP12.27□□□□□ -0.45
TROAP-211ENST00000549891 ZNF845Q96IR2 970 aaPredicted RBP12.27□□□□□ -0.45
TROAP-211ENST00000549891 Q96MF0 132 aa12.27□□□□□ -0.45
TROAP-211ENST00000549891 C1QTNF3Q9BXJ4 246 aa12.27□□□□□ -0.45
TROAP-211ENST00000549891 MRPL46Q9H2W6 279 aaKnown RBP12.27□□□□□ -0.45
TROAP-211ENST00000549891 UBTD1Q9HAC8 227 aa12.27□□□□□ -0.45
TROAP-211ENST00000549891 OR10H1Q9Y4A9 318 aa12.27□□□□□ -0.45
TROAP-211ENST00000549891 RAI1Q7Z5J4 1906 aaPredicted RBP12.27□□□□□ -0.45
TROAP-211ENST00000549891 FN1P02751 2386 aaKnown RBP12.26□□□□□ -0.45
TROAP-211ENST00000549891 GNG14A0A1W2PPG7 69 aa12.26□□□□□ -0.45
TROAP-211ENST00000549891 DEFB108AA8MXU0 73 aa12.26□□□□□ -0.45
TROAP-211ENST00000549891 C16orf97H3BN30 126 aa12.26□□□□□ -0.45
TROAP-211ENST00000549891 H7C1Q1 480 aa12.26□□□□□ -0.45
TROAP-211ENST00000549891 EMC8O43402 210 aa12.26□□□□□ -0.45
TROAP-211ENST00000549891 PLOD3O60568 738 aa12.26□□□□□ -0.45
TROAP-211ENST00000549891 TNFRSF21O75509 655 aa12.26□□□□□ -0.45
TROAP-211ENST00000549891 TCEA1P23193 301 aaKnown RBP12.26□□□□□ -0.45
TROAP-211ENST00000549891 CASQ1P31415 396 aa12.26□□□□□ -0.45
TROAP-211ENST00000549891 MPIP34949 423 aa12.26□□□□□ -0.45
TROAP-211ENST00000549891 GSTM5P46439 218 aa12.26□□□□□ -0.45
TROAP-211ENST00000549891 CDH13P55290 713 aa12.26□□□□□ -0.45
TROAP-211ENST00000549891 CORO7P57737 925 aa12.26□□□□□ -0.45
TROAP-211ENST00000549891 RASA2Q15283 850 aa12.26□□□□□ -0.45
TROAP-211ENST00000549891 RAET1LQ5VY80 246 aa12.26□□□□□ -0.45
TROAP-211ENST00000549891 VWA1Q6PCB0 445 aa12.26□□□□□ -0.45
TROAP-211ENST00000549891 YTHDF3Q7Z739 585 aaKnown RBP12.26□□□□□ -0.45
TROAP-211ENST00000549891 SLC44A2Q8IWA5 706 aaPredicted RBP12.26□□□□□ -0.45
TROAP-211ENST00000549891 OR9A2Q8NGT5 310 aa12.26□□□□□ -0.45
TROAP-211ENST00000549891 RNF138Q8WVD3 245 aa12.26□□□□□ -0.45
TROAP-211ENST00000549891 ANP32BQ92688 251 aaKnown RBP12.26□□□□□ -0.45
TROAP-211ENST00000549891 KAT2AQ92830 837 aa12.26□□□□□ -0.45
TROAP-211ENST00000549891 CAVIN3Q969G5 261 aa12.26□□□□□ -0.45
TROAP-211ENST00000549891 EXOSC8Q96B26 276 aaKnown RBP12.26□□□□□ -0.45
TROAP-211ENST00000549891 EFHD2Q96C19 240 aaPredicted RBP12.26□□□□□ -0.45
TROAP-211ENST00000549891 MTBPQ96DY7 904 aa12.26□□□□□ -0.45
TROAP-211ENST00000549891 VSTM2LQ96N03 204 aa12.26□□□□□ -0.45
TROAP-211ENST00000549891 PTGES2Q9H7Z7 377 aa12.26□□□□□ -0.45
TROAP-211ENST00000549891 FOLH1BQ9HBA9 442 aa12.26□□□□□ -0.45
TROAP-211ENST00000549891 HEY2Q9UBP5 337 aa12.26□□□□□ -0.45
TROAP-211ENST00000549891 PCNX3Q9H6A9 2034 aa12.26□□□□□ -0.45
TROAP-211ENST00000549891 PCDH7O60245 1069 aa12.25□□□□□ -0.45
TROAP-211ENST00000549891 COQ9O75208 318 aa12.25□□□□□ -0.45
TROAP-211ENST00000549891 ULK1O75385 1050 aa12.25□□□□□ -0.45
TROAP-211ENST00000549891 OR4F21O95013 312 aa12.25□□□□□ -0.45
TROAP-211ENST00000549891 IL3P08700 152 aa12.25□□□□□ -0.45
TROAP-211ENST00000549891 CD8BP10966 210 aa12.25□□□□□ -0.45
TROAP-211ENST00000549891 HK1P19367 917 aa12.25□□□□□ -0.45
TROAP-211ENST00000549891 EVI2BP34910 448 aa12.25□□□□□ -0.45
TROAP-211ENST00000549891 KIR2DL2P43627 348 aaPredicted RBP12.25□□□□□ -0.45
TROAP-211ENST00000549891 CLK3P49761 638 aaKnown RBP12.25□□□□□ -0.45
TROAP-211ENST00000549891 GAS1P54826 345 aa12.25□□□□□ -0.45
TROAP-211ENST00000549891 B3GALT5-AS1P59052 145 aa12.25□□□□□ -0.45
TROAP-211ENST00000549891 RPS3AP61247 264 aaKnown RBP12.25□□□□□ -0.45
TROAP-211ENST00000549891 SIRPAP78324 504 aa12.25□□□□□ -0.45
TROAP-211ENST00000549891 OCRLQ01968 901 aa12.25□□□□□ -0.45
TROAP-211ENST00000549891 SPIN4Q56A73 249 aa12.25□□□□□ -0.45
TROAP-211ENST00000549891 C8orf74Q6P047 294 aa12.25□□□□□ -0.45
TROAP-211ENST00000549891 ZNF474Q6S9Z5 364 aaPredicted RBP12.25□□□□□ -0.45
TROAP-211ENST00000549891 NPSR1Q6W5P4 371 aa12.25□□□□□ -0.45
TROAP-211ENST00000549891 RPS27LQ71UM5 84 aaKnown RBP12.25□□□□□ -0.45
TROAP-211ENST00000549891 BTLAQ7Z6A9 289 aa12.25□□□□□ -0.45
TROAP-211ENST00000549891 RELL1Q8IUW5 271 aa12.25□□□□□ -0.45
TROAP-211ENST00000549891 FAM9CQ8IZT9 166 aa12.25□□□□□ -0.45
TROAP-211ENST00000549891 FADS6Q8N9I5 356 aa12.25□□□□□ -0.45
TROAP-211ENST00000549891 GFM2Q969S9 779 aaKnown RBP12.25□□□□□ -0.45
TROAP-211ENST00000549891 PERPQ96FX8 193 aa12.25□□□□□ -0.45
TROAP-211ENST00000549891 HBEGFQ99075 208 aa12.25□□□□□ -0.45
TROAP-211ENST00000549891 PIGQQ9BRB3 760 aa12.25□□□□□ -0.45
TROAP-211ENST00000549891 PINK1Q9BXM7 581 aa12.25□□□□□ -0.45
TROAP-211ENST00000549891 TSPYL1Q9H0U9 437 aa12.25□□□□□ -0.45
TROAP-211ENST00000549891 OPN3Q9H1Y3 402 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms