RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 HOXA6P31267 233 aa17.84■□□□□ 0.45
BRF1-215ENST00000549655 MAP3K8P41279 467 aa17.84■□□□□ 0.45
BRF1-215ENST00000549655 AVPR1BP47901 424 aa17.84■□□□□ 0.45
BRF1-215ENST00000549655 UGT2B15P54855 530 aa17.84■□□□□ 0.45
BRF1-215ENST00000549655 MAP4K2Q12851 820 aa17.84■□□□□ 0.45
BRF1-215ENST00000549655 TARDBPQ13148 414 aaKnown RBP eCLIP17.84■□□□□ 0.45
BRF1-215ENST00000549655 GPR68Q15743 365 aa17.84■□□□□ 0.45
BRF1-215ENST00000549655 TMEM236Q5W0B7 351 aa17.84■□□□□ 0.45
BRF1-215ENST00000549655 P3H2Q8IVL5 708 aa17.84■□□□□ 0.45
BRF1-215ENST00000549655 DEPDC4Q8N2C3 294 aa17.84■□□□□ 0.45
BRF1-215ENST00000549655 Q8N9G6 341 aaPredicted RBP17.84■□□□□ 0.45
BRF1-215ENST00000549655 OR52R1Q8NGF1 315 aa17.84■□□□□ 0.45
BRF1-215ENST00000549655 ADAMTS18Q8TE60 1221 aa17.84■□□□□ 0.45
BRF1-215ENST00000549655 ELF4Q99607 663 aaPredicted RBP17.84■□□□□ 0.45
BRF1-215ENST00000549655 DGCR6LQ9BY27 220 aa17.84■□□□□ 0.45
BRF1-215ENST00000549655 LHPPQ9H008 270 aa17.84■□□□□ 0.45
BRF1-215ENST00000549655 PRTFDC1Q9NRG1 225 aa17.84■□□□□ 0.45
BRF1-215ENST00000549655 SATB2Q9UPW6 733 aa17.84■□□□□ 0.45
BRF1-215ENST00000549655 ASXL3Q9C0F0 2248 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 CCDC163A0A0D9SF12 145 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 BLACEA4D250 179 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 AGAP5A6NIR3 686 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 ZAR1LA6NP61 321 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 ZNF701M0R085 212 aaPredicted RBP17.83■□□□□ 0.44
BRF1-215ENST00000549655 CLDN4O14493 209 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 STX11O75558 287 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 SEC14L2O76054 403 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 PDGFBP01127 241 aaPredicted RBP17.83■□□□□ 0.44
BRF1-215ENST00000549655 OSMP13725 252 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 PCMT1P22061 227 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 POU1F1P28069 291 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 PCSK6P29122 969 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 GABRA3P34903 492 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 SEPHS1P49903 392 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 TAS2R41P59536 307 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 CSNK2BP67870 215 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 BTG2P78543 158 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 BNC1Q01954 994 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 CFHR1Q03591 330 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 LSAMPQ13449 338 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 GRM7Q14831 915 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 LARS2Q15031 903 aaKnown RBP17.83■□□□□ 0.44
BRF1-215ENST00000549655 SHBQ15464 509 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 GTF2IRD2BQ6EKJ0 949 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 GTF2IRD2Q86UP8 949 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 PLXDC1Q8IUK5 500 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 CCDC103Q8IW40 242 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 GALNT12Q8IXK2 581 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 ALDH16A1Q8IZ83 802 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 GALNT15Q8N3T1 639 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 MAFAQ8NHW3 353 aaPredicted RBP17.83■□□□□ 0.44
BRF1-215ENST00000549655 RIT1Q92963 219 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 RBM18Q96H35 190 aaKnown RBP17.83■□□□□ 0.44
BRF1-215ENST00000549655 MPP4Q96JB8 637 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 CNDP2Q96KP4 475 aaKnown RBP17.83■□□□□ 0.44
BRF1-215ENST00000549655 ALOXE3Q9BYJ1 711 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 IMPAD1Q9NX62 359 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 ZNF226Q9NYT6 803 aa17.83■□□□□ 0.44
BRF1-215ENST00000549655 TMEM184BQ9Y519 407 aaPredicted RBP17.83■□□□□ 0.44
BRF1-215ENST00000549655 CLDN24A6NM45 220 aa17.82■□□□□ 0.44
BRF1-215ENST00000549655 DUX1O43812 170 aa17.82■□□□□ 0.44
BRF1-215ENST00000549655 COQ9O75208 318 aa17.82■□□□□ 0.44
BRF1-215ENST00000549655 S1PR1P21453 382 aa17.82■□□□□ 0.44
BRF1-215ENST00000549655 DCKP27707 260 aa17.82■□□□□ 0.44
BRF1-215ENST00000549655 GPR3P46089 330 aa17.82■□□□□ 0.44
BRF1-215ENST00000549655 ARRB1P49407 418 aaPredicted RBP17.82■□□□□ 0.44
BRF1-215ENST00000549655 ZNF155Q12901 538 aaPredicted RBP17.82■□□□□ 0.44
BRF1-215ENST00000549655 DUSP8Q13202 625 aa17.82■□□□□ 0.44
BRF1-215ENST00000549655 ZNF619Q8N2I2 560 aa17.82■□□□□ 0.44
BRF1-215ENST00000549655 OR4K5Q8NGD3 323 aa17.82■□□□□ 0.44
BRF1-215ENST00000549655 FBXO34Q9NWN3 711 aa17.82■□□□□ 0.44
BRF1-215ENST00000549655 COL6A3P12111 3177 aa17.82■□□□□ 0.44
BRF1-215ENST00000549655 ARID1BQ8NFD5 2236 aaPredicted RBP17.82■□□□□ 0.44
BRF1-215ENST00000549655 CACNA1EQ15878 2313 aa17.82■□□□□ 0.44
BRF1-215ENST00000549655 CENPVL1A0A0U1RR11 272 aa17.82■□□□□ 0.44
BRF1-215ENST00000549655 OR2W5A6NFC9 320 aa17.82■□□□□ 0.44
BRF1-215ENST00000549655 CPSF4LA6NMK7 179 aaKnown RBP17.82■□□□□ 0.44
BRF1-215ENST00000549655 CCNYL3P0C7X3 344 aa17.82■□□□□ 0.44
BRF1-215ENST00000549655 GABRB1P18505 474 aa17.82■□□□□ 0.44
BRF1-215ENST00000549655 RGS8P57771 180 aaPredicted RBP17.82■□□□□ 0.44
BRF1-215ENST00000549655 HSD11B2P80365 405 aa17.82■□□□□ 0.44
BRF1-215ENST00000549655 IGLV3-21P80748 117 aaPredicted RBP17.82■□□□□ 0.44
BRF1-215ENST00000549655 HOXC5Q00444 222 aa17.82■□□□□ 0.44
BRF1-215ENST00000549655 EMX1Q04741 257 aaPredicted RBP17.82■□□□□ 0.44
BRF1-215ENST00000549655 TUBA3CQ13748 450 aa17.82■□□□□ 0.44
BRF1-215ENST00000549655 SNAP47Q5SQN1 464 aa17.82■□□□□ 0.44
BRF1-215ENST00000549655 CWF19L1Q69YN2 538 aaKnown RBP17.82■□□□□ 0.44
BRF1-215ENST00000549655 ZNF836Q6ZNA1 936 aa17.82■□□□□ 0.44
BRF1-215ENST00000549655 LINC00471Q8N535 108 aa17.82■□□□□ 0.44
BRF1-215ENST00000549655 MORN4Q8NDC4 146 aa17.82■□□□□ 0.44
BRF1-215ENST00000549655 OR51Q1Q8NH59 317 aa17.82■□□□□ 0.44
BRF1-215ENST00000549655 ZNF420Q8TAQ5 688 aaPredicted RBP17.82■□□□□ 0.44
BRF1-215ENST00000549655 NR4A3Q92570 626 aa17.82■□□□□ 0.44
BRF1-215ENST00000549655 MUL1Q969V5 352 aa17.82■□□□□ 0.44
BRF1-215ENST00000549655 C12orf43Q96C57 262 aaKnown RBP17.82■□□□□ 0.44
BRF1-215ENST00000549655 SAP130Q9H0E3 1048 aa17.82■□□□□ 0.44
BRF1-215ENST00000549655 POLR2J3Q9H1A7 115 aaKnown RBP17.82■□□□□ 0.44
BRF1-215ENST00000549655 LIN28AQ9H9Z2 209 aaKnown RBP17.82■□□□□ 0.44
BRF1-215ENST00000549655 CAPN10Q9HC96 672 aa17.82■□□□□ 0.44
BRF1-215ENST00000549655 CCNB1IP1Q9NPC3 277 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms