RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 EVA1BQ9NVM1 165 aa21.72■■□□□ 1.07
NPAS3-206ENST00000548645 CUEDC1Q9NWM3 386 aaPredicted RBP21.72■■□□□ 1.07
NPAS3-206ENST00000548645 ZNF224Q9NZL3 707 aa21.72■■□□□ 1.07
NPAS3-206ENST00000548645 RTCAO00442 366 aaKnown RBP21.72■■□□□ 1.07
NPAS3-206ENST00000548645 EIF4EP06730 217 aaKnown RBP21.72■■□□□ 1.07
NPAS3-206ENST00000548645 BUD31P41223 144 aaPredicted RBP21.72■■□□□ 1.07
NPAS3-206ENST00000548645 FRKP42685 505 aaPredicted RBP21.72■■□□□ 1.07
NPAS3-206ENST00000548645 TMEM65Q6PI78 240 aa21.72■■□□□ 1.07
NPAS3-206ENST00000548645 CFAP206Q8IYR0 622 aa21.72■■□□□ 1.07
NPAS3-206ENST00000548645 CMTM8Q8IZV2 173 aa21.72■■□□□ 1.07
NPAS3-206ENST00000548645 OR5D16Q8NGK9 328 aa21.72■■□□□ 1.07
NPAS3-206ENST00000548645 BBS10Q8TAM1 723 aa21.72■■□□□ 1.07
NPAS3-206ENST00000548645 LMLNQ96KR4 655 aa21.72■■□□□ 1.07
NPAS3-206ENST00000548645 A0A1B0GVI7 797 aa21.71■■□□□ 1.07
NPAS3-206ENST00000548645 RPS10-NUDT3A0A1W2PQS6 291 aa21.71■■□□□ 1.07
NPAS3-206ENST00000548645 GRM6O15303 877 aa21.71■■□□□ 1.07
NPAS3-206ENST00000548645 HOXA2O43364 376 aa21.71■■□□□ 1.07
NPAS3-206ENST00000548645 TCRBP04435 133 aa21.71■■□□□ 1.07
NPAS3-206ENST00000548645 CKMP06732 381 aa21.71■■□□□ 1.07
NPAS3-206ENST00000548645 RNF144AP50876 292 aaPredicted RBP21.71■■□□□ 1.07
NPAS3-206ENST00000548645 EXOSC2Q13868 293 aaKnown RBP21.71■■□□□ 1.07
NPAS3-206ENST00000548645 GPR135Q8IZ08 494 aa21.71■■□□□ 1.07
NPAS3-206ENST00000548645 SETD7Q8WTS6 366 aaKnown RBP21.71■■□□□ 1.07
NPAS3-206ENST00000548645 PCDH10Q9P2E7 1040 aa21.71■■□□□ 1.07
NPAS3-206ENST00000548645 RNF13O43567 381 aa21.71■■□□□ 1.07
NPAS3-206ENST00000548645 PI15O43692 258 aa21.71■■□□□ 1.07
NPAS3-206ENST00000548645 CXCL3P19876 107 aa21.71■■□□□ 1.07
NPAS3-206ENST00000548645 RAB14P61106 215 aa21.71■■□□□ 1.07
NPAS3-206ENST00000548645 HSD17B12Q53GQ0 312 aa21.71■■□□□ 1.07
NPAS3-206ENST00000548645 ZNF689Q96CS4 500 aaPredicted RBP21.71■■□□□ 1.07
NPAS3-206ENST00000548645 CAMK1GQ96NX5 476 aa21.71■■□□□ 1.07
NPAS3-206ENST00000548645 NFATC1O95644 943 aa21.7■■□□□ 1.06
NPAS3-206ENST00000548645 EPPINO95925 133 aa21.7■■□□□ 1.06
NPAS3-206ENST00000548645 CH25HO95992 272 aa21.7■■□□□ 1.06
NPAS3-206ENST00000548645 PEPDP12955 493 aa21.7■■□□□ 1.06
NPAS3-206ENST00000548645 NPR2P20594 1047 aa21.7■■□□□ 1.06
NPAS3-206ENST00000548645 RECQLP46063 649 aaPredicted RBP21.7■■□□□ 1.06
NPAS3-206ENST00000548645 ZNF81P51508 661 aa21.7■■□□□ 1.06
NPAS3-206ENST00000548645 EPHB3P54753 998 aa21.7■■□□□ 1.06
NPAS3-206ENST00000548645 BDH1Q02338 343 aa21.7■■□□□ 1.06
NPAS3-206ENST00000548645 KHDRBS2Q5VWX1 349 aaKnown RBP21.7■■□□□ 1.06
NPAS3-206ENST00000548645 PYHIN1Q6K0P9 492 aa21.7■■□□□ 1.06
NPAS3-206ENST00000548645 RRM2BQ7LG56 351 aa21.7■■□□□ 1.06
NPAS3-206ENST00000548645 C16orf62Q7Z3J2 963 aa21.7■■□□□ 1.06
NPAS3-206ENST00000548645 DTX3Q8N9I9 347 aa21.7■■□□□ 1.06
NPAS3-206ENST00000548645 OR6C4Q8NGE1 309 aa21.7■■□□□ 1.06
NPAS3-206ENST00000548645 CNIH4Q9P003 139 aa21.7■■□□□ 1.06
NPAS3-206ENST00000548645 PLXNA2O75051 1894 aa21.7■■□□□ 1.06
NPAS3-206ENST00000548645 CKAP5Q14008 2032 aa21.7■■□□□ 1.06
NPAS3-206ENST00000548645 KIF26AQ9ULI4 1882 aaPredicted RBP21.7■■□□□ 1.06
NPAS3-206ENST00000548645 TAS2R41P59536 307 aa21.7■■□□□ 1.06
NPAS3-206ENST00000548645 RAB8AP61006 207 aa21.7■■□□□ 1.06
NPAS3-206ENST00000548645 IL20RBQ6UXL0 311 aa21.7■■□□□ 1.06
NPAS3-206ENST00000548645 OSTF1Q92882 214 aa21.7■■□□□ 1.06
NPAS3-206ENST00000548645 BCL2L10Q9HD36 194 aa21.7■■□□□ 1.06
NPAS3-206ENST00000548645 COPZ2Q9P299 210 aa21.7■■□□□ 1.06
NPAS3-206ENST00000548645 TNFRSF10DQ9UBN6 386 aa21.7■■□□□ 1.06
NPAS3-206ENST00000548645 DVL2O14641 736 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 BET1O15155 118 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 SURF4O15260 269 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 CTRB1P17538 263 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 HTR1FP30939 366 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 SOX9P48436 509 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 LGALSLQ3ZCW2 172 aaPredicted RBP21.69■■□□□ 1.06
NPAS3-206ENST00000548645 PRAMEF14Q5SWL7 426 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 PRAMEF13Q5VWM6 474 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 CTRB2Q6GPI1 263 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 SMARCD3Q6STE5 483 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 GALNT11Q8NCW6 608 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 VN1R3Q9BXE9 311 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 ACSS1Q9NUB1 689 aaPredicted RBP21.69■■□□□ 1.06
NPAS3-206ENST00000548645 MED17Q9NVC6 651 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 COQ3Q9NZJ6 369 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 MARK1Q9P0L2 795 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 H2AFY2Q9P0M6 372 aaPredicted RBP21.69■■□□□ 1.06
NPAS3-206ENST00000548645 ALDH1A1P00352 501 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 BSGP35613 385 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 MLLT1Q03111 559 aaPredicted RBP21.69■■□□□ 1.06
NPAS3-206ENST00000548645 SLC30A6Q6NXT4 461 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 OLIG3Q7RTU3 272 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 HMGN2P46Q86SG4 172 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 OR8K5Q8NH50 307 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 NXPE2Q96DL1 559 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 RADILQ96JH8 1075 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 F2RL3Q96RI0 385 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 UCKL1Q9NWZ5 548 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 PLXND1Q9Y4D7 1925 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 CASC3O15234 703 aaKnown RBP21.69■■□□□ 1.06
NPAS3-206ENST00000548645 DNASE1P24855 282 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 TRIM23P36406 574 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 SRP9P49458 86 aaKnown RBP21.69■■□□□ 1.06
NPAS3-206ENST00000548645 CLCNKAP51800 687 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 OR2A12Q8NGT7 310 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 HSD17B8Q92506 261 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 FAM46AQ96IP4 442 aaKnown RBP21.69■■□□□ 1.06
NPAS3-206ENST00000548645 ZSWIM3Q96MP5 696 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 JAM3Q9BX67 310 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 ERVMER34-1Q9H9K5 563 aa21.69■■□□□ 1.06
NPAS3-206ENST00000548645 LOC105369274A0A096LPK9 316 aa21.68■■□□□ 1.06
NPAS3-206ENST00000548645 WASH3PC4AMC7 463 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms