RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 GIMAP4Q9NUV9 329 aa12.11□□□□□ -0.47
CPSF6-204ENST00000547486 OXSMQ9NWU1 459 aa12.11□□□□□ -0.47
CPSF6-204ENST00000547486 TAS2R9Q9NYW1 312 aa12.11□□□□□ -0.47
CPSF6-204ENST00000547486 PTGDR2Q9Y5Y4 395 aa12.11□□□□□ -0.47
CPSF6-204ENST00000547486 MED12Q93074 2177 aa12.11□□□□□ -0.47
CPSF6-204ENST00000547486 A0A087WV62 115 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 SMIM23A6NLE4 172 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 A6NNC1 897 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 CLCA1A8K7I4 914 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 H0Y3Z8 333 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 FADS1O60427 444 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 RCBTB2O95199 551 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 PSMG1O95456 288 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 IL18BPO95998 194 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 TMIGD3P0DMS9 266 aaPredicted RBP12.1□□□□□ -0.47
CPSF6-204ENST00000547486 CPA3P15088 417 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 TACR1P25103 407 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 IL12BP29460 328 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 CRHR1P34998 444 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 OPRM1P35372 400 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 GSTM5P46439 218 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 CCT5P48643 541 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 DGKQP52824 942 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 CLDN18P56856 261 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 B3GALT5-AS1P59052 145 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 GAB1Q13480 694 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 EFR3AQ14156 821 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 RCAN2Q14206 197 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 DAZAP2Q15038 168 aaPredicted RBP12.1□□□□□ -0.47
CPSF6-204ENST00000547486 FLYWCH1Q4VC44 716 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 CLEC6AQ6EIG7 209 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 NOXRED1Q6NXP6 359 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 ENPP6Q6UWR7 440 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 IFNEQ86WN2 208 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 CDC20BQ86Y33 519 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 FAM222BQ8WU58 562 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 ELP4Q96EB1 424 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 AMDHD1Q96NU7 426 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 UCN2Q96RP3 112 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 STMN4Q9H169 189 aaPredicted RBP12.1□□□□□ -0.47
CPSF6-204ENST00000547486 MYNNQ9NPC7 610 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 CCM2LQ9NUG4 571 aaPredicted RBP12.1□□□□□ -0.47
CPSF6-204ENST00000547486 SENP1Q9P0U3 644 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 FOXD3Q9UJU5 478 aaPredicted RBP12.1□□□□□ -0.47
CPSF6-204ENST00000547486 GRID1Q9ULK0 1009 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 C19orf53Q9UNZ5 99 aaPredicted RBP12.1□□□□□ -0.47
CPSF6-204ENST00000547486 RPH3AQ9Y2J0 694 aaPredicted RBP12.1□□□□□ -0.47
CPSF6-204ENST00000547486 MRPS18CQ9Y3D5 142 aaKnown RBP12.1□□□□□ -0.47
CPSF6-204ENST00000547486 OR10H1Q9Y4A9 318 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 EXPH5Q8NEV8 1989 aa12.1□□□□□ -0.47
CPSF6-204ENST00000547486 ARHGAP21Q5T5U3 1957 aa12.09□□□□□ -0.47
CPSF6-204ENST00000547486 TUBAL3A6NHL2 446 aa12.09□□□□□ -0.47
CPSF6-204ENST00000547486 EEF1E1-BLOC1S5C9J1V9 151 aa12.09□□□□□ -0.47
CPSF6-204ENST00000547486 PLOD2O00469 737 aa12.09□□□□□ -0.47
CPSF6-204ENST00000547486 EEF1E1O43324 174 aaKnown RBP12.09□□□□□ -0.47
CPSF6-204ENST00000547486 ZNF708P17019 499 aa12.09□□□□□ -0.47
CPSF6-204ENST00000547486 DPP4P27487 766 aa12.09□□□□□ -0.47
CPSF6-204ENST00000547486 GCKP35557 465 aa12.09□□□□□ -0.47
CPSF6-204ENST00000547486 KRT20P35900 424 aa12.09□□□□□ -0.47
CPSF6-204ENST00000547486 PEX19P40855 299 aa12.09□□□□□ -0.47
CPSF6-204ENST00000547486 CLDN15P56746 228 aa12.09□□□□□ -0.47
CPSF6-204ENST00000547486 ZNF155Q12901 538 aaPredicted RBP12.09□□□□□ -0.47
CPSF6-204ENST00000547486 IMPG1Q17R60 797 aa12.09□□□□□ -0.47
CPSF6-204ENST00000547486 CCDC153Q494R4 210 aa12.09□□□□□ -0.47
CPSF6-204ENST00000547486 CFAP157Q5JU67 520 aa12.09□□□□□ -0.47
CPSF6-204ENST00000547486 SH2D4BQ5SQS7 431 aa12.09□□□□□ -0.47
CPSF6-204ENST00000547486 AAGABQ6PD74 315 aa12.09□□□□□ -0.47
CPSF6-204ENST00000547486 TDRPQ86YL5 185 aa12.09□□□□□ -0.47
CPSF6-204ENST00000547486 OR2L13Q8N349 312 aa12.09□□□□□ -0.47
CPSF6-204ENST00000547486 EIF1ADQ8N9N8 165 aaKnown RBP12.09□□□□□ -0.47
CPSF6-204ENST00000547486 OR2M3Q8NG83 312 aa12.09□□□□□ -0.47
CPSF6-204ENST00000547486 FAM76AQ8TAV0 307 aa12.09□□□□□ -0.47
CPSF6-204ENST00000547486 EPS8L3Q8TE67 593 aaKnown RBP12.09□□□□□ -0.47
CPSF6-204ENST00000547486 UBLCP1Q8WVY7 318 aaPredicted RBP12.09□□□□□ -0.47
CPSF6-204ENST00000547486 WNT2BQ93097 391 aa12.09□□□□□ -0.47
CPSF6-204ENST00000547486 INTS12Q96CB8 462 aaKnown RBP12.09□□□□□ -0.47
CPSF6-204ENST00000547486 LRRC46Q96FV0 321 aa12.09□□□□□ -0.47
CPSF6-204ENST00000547486 SFXN2Q96NB2 322 aa12.09□□□□□ -0.47
CPSF6-204ENST00000547486 DSN1Q9H410 356 aa12.09□□□□□ -0.47
CPSF6-204ENST00000547486 MIEF1Q9NQG6 463 aa12.09□□□□□ -0.47
CPSF6-204ENST00000547486 CLCF1Q9UBD9 225 aa12.09□□□□□ -0.47
CPSF6-204ENST00000547486 ST6GALNAC2Q9UJ37 374 aa12.09□□□□□ -0.47
CPSF6-204ENST00000547486 WBP11Q9Y2W2 641 aaKnown RBP12.09□□□□□ -0.47
CPSF6-204ENST00000547486 ANKRD17O75179 2603 aaKnown RBP12.09□□□□□ -0.47
CPSF6-204ENST00000547486 SCO2O43819 266 aa12.08□□□□□ -0.48
CPSF6-204ENST00000547486 COQ9O75208 318 aa12.08□□□□□ -0.48
CPSF6-204ENST00000547486 SEC22BO75396 215 aa12.08□□□□□ -0.48
CPSF6-204ENST00000547486 CRCPO75575 148 aa12.08□□□□□ -0.48
CPSF6-204ENST00000547486 RSL1D1O76021 490 aaKnown RBP12.08□□□□□ -0.48
CPSF6-204ENST00000547486 TGM6O95932 706 aa12.08□□□□□ -0.48
CPSF6-204ENST00000547486 UROSP10746 265 aa12.08□□□□□ -0.48
CPSF6-204ENST00000547486 EPXP11678 715 aa12.08□□□□□ -0.48
CPSF6-204ENST00000547486 CD1EP15812 388 aa12.08□□□□□ -0.48
CPSF6-204ENST00000547486 KRT4P19013 534 aa12.08□□□□□ -0.48
CPSF6-204ENST00000547486 CHMP24386 653 aa12.08□□□□□ -0.48
CPSF6-204ENST00000547486 EVI2BP34910 448 aa12.08□□□□□ -0.48
CPSF6-204ENST00000547486 PSPHP78330 225 aa12.08□□□□□ -0.48
CPSF6-204ENST00000547486 CYP27C1Q4G0S4 372 aa12.08□□□□□ -0.48
CPSF6-204ENST00000547486 ANKRD26P1Q6NSI1 321 aa12.08□□□□□ -0.48
CPSF6-204ENST00000547486 Q6ZSR9 355 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms