RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 GPRIN2O60269 458 aa11.43□□□□□ -0.58
SCAF11-208ENST00000546534 ADAM11O75078 769 aa11.43□□□□□ -0.58
SCAF11-208ENST00000546534 NDUFS7O75251 213 aa11.43□□□□□ -0.58
SCAF11-208ENST00000546534 AQP8O94778 261 aa11.43□□□□□ -0.58
SCAF11-208ENST00000546534 ATP1B1P05026 303 aa11.43□□□□□ -0.58
SCAF11-208ENST00000546534 KLK1P06870 262 aa11.43□□□□□ -0.58
SCAF11-208ENST00000546534 THBS1P07996 1170 aa11.43□□□□□ -0.58
SCAF11-208ENST00000546534 DANCRP0C864 163 aa11.43□□□□□ -0.58
SCAF11-208ENST00000546534 PIK3CGP48736 1102 aa11.43□□□□□ -0.58
SCAF11-208ENST00000546534 EMDP50402 254 aa11.43□□□□□ -0.58
SCAF11-208ENST00000546534 GAS1P54826 345 aa11.43□□□□□ -0.58
SCAF11-208ENST00000546534 DSCR4P56555 118 aaPredicted RBP11.43□□□□□ -0.58
SCAF11-208ENST00000546534 CLDN20P56880 219 aa11.43□□□□□ -0.58
SCAF11-208ENST00000546534 EEFSECP57772 596 aaKnown RBP11.43□□□□□ -0.58
SCAF11-208ENST00000546534 GPX6P59796 221 aa11.43□□□□□ -0.58
SCAF11-208ENST00000546534 DUSP2Q05923 314 aa11.43□□□□□ -0.58
SCAF11-208ENST00000546534 ILF2Q12905 390 aaKnown RBP11.43□□□□□ -0.58
SCAF11-208ENST00000546534 PDIA2Q13087 525 aaKnown RBP11.43□□□□□ -0.58
SCAF11-208ENST00000546534 ZKSCAN8Q15776 578 aaPredicted RBP11.43□□□□□ -0.58
SCAF11-208ENST00000546534 RAET1LQ5VY80 246 aa11.43□□□□□ -0.58
SCAF11-208ENST00000546534 ADAM5Q6NVV9 412 aa11.43□□□□□ -0.58
SCAF11-208ENST00000546534 DNM1P46Q6ZS02 220 aa11.43□□□□□ -0.58
SCAF11-208ENST00000546534 GBP7Q8N8V2 638 aaPredicted RBP11.43□□□□□ -0.58
SCAF11-208ENST00000546534 OR4K17Q8NGC6 315 aa11.43□□□□□ -0.58
SCAF11-208ENST00000546534 WDR20Q8TBZ3 569 aa11.43□□□□□ -0.58
SCAF11-208ENST00000546534 ACTRT1Q8TDG2 376 aa11.43□□□□□ -0.58
SCAF11-208ENST00000546534 GTPBP3Q969Y2 492 aaKnown RBP11.43□□□□□ -0.58
SCAF11-208ENST00000546534 SLC35A4Q96G79 324 aa11.43□□□□□ -0.58
SCAF11-208ENST00000546534 GPR22Q99680 433 aa11.43□□□□□ -0.58
SCAF11-208ENST00000546534 ACTR6Q9GZN1 396 aa11.43□□□□□ -0.58
SCAF11-208ENST00000546534 LIPT1Q9Y234 373 aa11.43□□□□□ -0.58
SCAF11-208ENST00000546534 GPR55Q9Y2T6 319 aaPredicted RBP11.43□□□□□ -0.58
SCAF11-208ENST00000546534 RNF11Q9Y3C5 154 aa11.43□□□□□ -0.58
SCAF11-208ENST00000546534 JRKLQ9Y4A0 524 aa11.43□□□□□ -0.58
SCAF11-208ENST00000546534 ANGPTL3Q9Y5C1 460 aa11.43□□□□□ -0.58
SCAF11-208ENST00000546534 GOLGA6L10A6NI86 522 aa11.42□□□□□ -0.58
SCAF11-208ENST00000546534 TSPAN2O60636 221 aa11.42□□□□□ -0.58
SCAF11-208ENST00000546534 KERAO60938 352 aa11.42□□□□□ -0.58
SCAF11-208ENST00000546534 NME6O75414 186 aaPredicted RBP11.42□□□□□ -0.58
SCAF11-208ENST00000546534 ERAL1O75616 437 aaKnown RBP11.42□□□□□ -0.58
SCAF11-208ENST00000546534 IGHV4-39P01824 125 aa11.42□□□□□ -0.58
SCAF11-208ENST00000546534 MTHFD2P13995 350 aa11.42□□□□□ -0.58
SCAF11-208ENST00000546534 PCSK2P16519 638 aa11.42□□□□□ -0.58
SCAF11-208ENST00000546534 HK1P19367 917 aa11.42□□□□□ -0.58
SCAF11-208ENST00000546534 DEKP35659 375 aaKnown RBP11.42□□□□□ -0.58
SCAF11-208ENST00000546534 RAB10P61026 200 aa11.42□□□□□ -0.58
SCAF11-208ENST00000546534 LTB4RQ15722 352 aa11.42□□□□□ -0.58
SCAF11-208ENST00000546534 C6orf52Q5T4I8 152 aa11.42□□□□□ -0.58
SCAF11-208ENST00000546534 ALKBH2Q6NS38 261 aa11.42□□□□□ -0.58
SCAF11-208ENST00000546534 SLC48A1Q6P1K1 146 aa11.42□□□□□ -0.58
SCAF11-208ENST00000546534 FADS6Q8N9I5 356 aa11.42□□□□□ -0.58
SCAF11-208ENST00000546534 OR5M1Q8NGP8 315 aa11.42□□□□□ -0.58
SCAF11-208ENST00000546534 RNF138Q8WVD3 245 aa11.42□□□□□ -0.58
SCAF11-208ENST00000546534 FBXW5Q969U6 566 aa11.42□□□□□ -0.58
SCAF11-208ENST00000546534 LRRC1Q9BTT6 524 aa11.42□□□□□ -0.58
SCAF11-208ENST00000546534 C19orf24Q9BVV8 132 aa11.42□□□□□ -0.58
SCAF11-208ENST00000546534 DSN1Q9H410 356 aa11.42□□□□□ -0.58
SCAF11-208ENST00000546534 ANKRA2Q9H9E1 313 aa11.42□□□□□ -0.58
SCAF11-208ENST00000546534 PRODH2Q9UF12 536 aa11.42□□□□□ -0.58
SCAF11-208ENST00000546534 CDC42EP3Q9UKI2 254 aa11.42□□□□□ -0.58
SCAF11-208ENST00000546534 CLEC4AQ9UMR7 237 aa11.42□□□□□ -0.58
SCAF11-208ENST00000546534 PCDHA9Q9Y5H5 950 aa11.42□□□□□ -0.58
SCAF11-208ENST00000546534 MAGED1Q9Y5V3 778 aaPredicted RBP11.42□□□□□ -0.58
SCAF11-208ENST00000546534 UQCRHLA0A096LP55 91 aa11.41□□□□□ -0.58
SCAF11-208ENST00000546534 OR2M5A3KFT3 312 aa11.41□□□□□ -0.58
SCAF11-208ENST00000546534 H3BML4 177 aa11.41□□□□□ -0.58
SCAF11-208ENST00000546534 SEMA3DO95025 777 aa11.41□□□□□ -0.58
SCAF11-208ENST00000546534 CT45A8P0DMV1 189 aa11.41□□□□□ -0.58
SCAF11-208ENST00000546534 CT45A9P0DMV2 189 aa11.41□□□□□ -0.58
SCAF11-208ENST00000546534 CSNK2A2P19784 350 aaPredicted RBP11.41□□□□□ -0.58
SCAF11-208ENST00000546534 SLC6A8P48029 635 aa11.41□□□□□ -0.58
SCAF11-208ENST00000546534 CORO7P57737 925 aa11.41□□□□□ -0.58
SCAF11-208ENST00000546534 MRPS35P82673 323 aaKnown RBP11.41□□□□□ -0.58
SCAF11-208ENST00000546534 ZNF844Q08AG5 666 aa11.41□□□□□ -0.58
SCAF11-208ENST00000546534 EFR3AQ14156 821 aa11.41□□□□□ -0.58
SCAF11-208ENST00000546534 SLMAPQ14BN4 828 aa11.41□□□□□ -0.58
SCAF11-208ENST00000546534 CT45A2Q5DJT8 189 aa11.41□□□□□ -0.58
SCAF11-208ENST00000546534 CCNYL2Q5T2Q4 361 aa11.41□□□□□ -0.58
SCAF11-208ENST00000546534 FAM180BQ6P0A1 224 aa11.41□□□□□ -0.58
SCAF11-208ENST00000546534 LARP4Q71RC2 724 aaKnown RBP eCLIP11.41□□□□□ -0.58
SCAF11-208ENST00000546534 L3MBTL4Q8NA19 623 aa11.41□□□□□ -0.58
SCAF11-208ENST00000546534 OR2M3Q8NG83 312 aa11.41□□□□□ -0.58
SCAF11-208ENST00000546534 OR6K3Q8NGY3 331 aa11.41□□□□□ -0.58
SCAF11-208ENST00000546534 SMAP2Q8WU79 429 aaPredicted RBP11.41□□□□□ -0.58
SCAF11-208ENST00000546534 NEUROG1Q92886 237 aa11.41□□□□□ -0.58
SCAF11-208ENST00000546534 BTBD9Q96Q07 612 aa11.41□□□□□ -0.58
SCAF11-208ENST00000546534 OSBPL9Q96SU4 736 aa11.41□□□□□ -0.58
SCAF11-208ENST00000546534 SERPINI1Q99574 410 aa11.41□□□□□ -0.58
SCAF11-208ENST00000546534 RBBP8Q99708 897 aa11.41□□□□□ -0.58
SCAF11-208ENST00000546534 MRPL1Q9BYD6 325 aaKnown RBP11.41□□□□□ -0.58
SCAF11-208ENST00000546534 AMBRA1Q9C0C7 1298 aa11.41□□□□□ -0.58
SCAF11-208ENST00000546534 STMN4Q9H169 189 aaPredicted RBP11.41□□□□□ -0.58
SCAF11-208ENST00000546534 NMRAL1Q9HBL8 299 aa11.41□□□□□ -0.58
SCAF11-208ENST00000546534 PPP4R1LQ9P1A2 415 aa11.41□□□□□ -0.58
SCAF11-208ENST00000546534 GDF2Q9UK05 429 aaPredicted RBP11.41□□□□□ -0.58
SCAF11-208ENST00000546534 EMC9Q9Y3B6 208 aa11.41□□□□□ -0.58
SCAF11-208ENST00000546534 RNF115Q9Y4L5 304 aa11.41□□□□□ -0.58
SCAF11-208ENST00000546534 A0A096LNT2 108 aa11.4□□□□□ -0.58
SCAF11-208ENST00000546534 C1orf226A1L170 272 aa11.4□□□□□ -0.58
SCAF11-208ENST00000546534 E7ESA3 106 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms