RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 TMEM265A0A087WTH1 108 aa11.15□□□□□ -0.63
CCDC38-202ENST00000546386 PNMA8CA0A1B0GUJ8 204 aa11.15□□□□□ -0.63
CCDC38-202ENST00000546386 IFNA14P01570 189 aa11.15□□□□□ -0.63
CCDC38-202ENST00000546386 FASLGP48023 281 aa11.15□□□□□ -0.63
CCDC38-202ENST00000546386 TAS2R41P59536 307 aa11.15□□□□□ -0.63
CCDC38-202ENST00000546386 FAM53BQ14153 422 aa11.15□□□□□ -0.63
CCDC38-202ENST00000546386 PRICKLE4Q2TBC4 344 aa11.15□□□□□ -0.63
CCDC38-202ENST00000546386 PERM1Q5SV97 790 aa11.15□□□□□ -0.63
CCDC38-202ENST00000546386 CWF19L1Q69YN2 538 aaKnown RBP11.15□□□□□ -0.63
CCDC38-202ENST00000546386 PIWIL3Q7Z3Z3 882 aaKnown RBP11.15□□□□□ -0.63
CCDC38-202ENST00000546386 KRT73Q86Y46 540 aa11.15□□□□□ -0.63
CCDC38-202ENST00000546386 SPARTQ8N0X7 666 aa11.15□□□□□ -0.63
CCDC38-202ENST00000546386 EID2Q8N6I1 236 aa11.15□□□□□ -0.63
CCDC38-202ENST00000546386 CADM4Q8NFZ8 388 aa11.15□□□□□ -0.63
CCDC38-202ENST00000546386 TMEM255BQ8WV15 326 aa11.15□□□□□ -0.63
CCDC38-202ENST00000546386 RIT1Q92963 219 aa11.15□□□□□ -0.63
CCDC38-202ENST00000546386 EFHD2Q96C19 240 aaPredicted RBP11.15□□□□□ -0.63
CCDC38-202ENST00000546386 REPIN1Q9BWE0 567 aaKnown RBP11.15□□□□□ -0.63
CCDC38-202ENST00000546386 OR8D2Q9GZM6 311 aa11.15□□□□□ -0.63
CCDC38-202ENST00000546386 PDE7BQ9NP56 450 aa11.15□□□□□ -0.63
CCDC38-202ENST00000546386 NECTIN3Q9NQS3 549 aa11.15□□□□□ -0.63
CCDC38-202ENST00000546386 LYARQ9NX58 379 aaKnown RBP11.15□□□□□ -0.63
CCDC38-202ENST00000546386 BOLA1Q9Y3E2 137 aa11.15□□□□□ -0.63
CCDC38-202ENST00000546386 GPC6Q9Y625 555 aaPredicted RBP11.15□□□□□ -0.63
CCDC38-202ENST00000546386 IGHV1OR21-1A0A087WYE8 117 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 H0YAE9 185 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 FAM20BO75063 409 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 UGT2B17O75795 530 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 TIAF1O95411 115 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 THY1P04216 161 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 LCKP06239 509 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 CHMP24386 653 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 CD1CP29017 333 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 ZNF628Q5EBL2 1059 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 DCST1Q5T197 706 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 ATAD3BQ5T9A4 648 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 LYSMD4Q5XG99 296 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 FCRLBQ6BAA4 426 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 XAF1Q6GPH4 301 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 FAHD1Q6P587 224 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 FRRS1Q6ZNA5 592 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 CCDC80Q76M96 950 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 GPR141Q7Z602 305 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 DNAJC22Q8N4W6 341 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 SLC38A9Q8NBW4 561 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 OR1L3Q8NH93 324 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 PSMA8Q8TAA3 256 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 CCDC74AQ96AQ1 378 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 FAM46AQ96IP4 442 aaKnown RBP11.14□□□□□ -0.63
CCDC38-202ENST00000546386 KLHDC3Q9BQ90 382 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 PLA2G12AQ9BZM1 189 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 ZNF556Q9HAH1 456 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 NLGN3Q9NZ94 848 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 DNAJC27Q9NZQ0 273 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 FLRT3Q9NZU0 649 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 PHF11Q9UIL8 331 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 A0A087WXM4 84 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 ATE1O95260 518 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 IGKV1D-16P01601 117 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 ALPPP05187 535 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 H1F0P07305 194 aaKnown RBP11.14□□□□□ -0.63
CCDC38-202ENST00000546386 HSMCR30P0CW71 290 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 RHCEP18577 417 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 HLA-BQ31612 363 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 FAM214AQ32MH5 1076 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 PUS10Q3MIT2 529 aaKnown RBP11.14□□□□□ -0.63
CCDC38-202ENST00000546386 SOWAHCQ53LP3 525 aaPredicted RBP11.14□□□□□ -0.63
CCDC38-202ENST00000546386 COLEC12Q5KU26 742 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 TYW3Q6IPR3 259 aaKnown RBP11.14□□□□□ -0.63
CCDC38-202ENST00000546386 SHFQ7M4L6 423 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 ZER1Q7Z7L7 766 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 VWA5B2Q8N398 1253 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 OR56A1Q8NGH5 318 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 OR5M3Q8NGP4 307 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 CLDN23Q96B33 292 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 DGCR14Q96DF8 476 aaKnown RBP11.14□□□□□ -0.63
CCDC38-202ENST00000546386 MSANTD3Q96H12 275 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 SDF2Q99470 211 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 ELF4Q99607 663 aaPredicted RBP11.14□□□□□ -0.63
CCDC38-202ENST00000546386 EPYCQ99645 322 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 RBM38Q9H0Z9 239 aaKnown RBP11.14□□□□□ -0.63
CCDC38-202ENST00000546386 APMAPQ9HDC9 416 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 MAN2C1Q9NTJ4 1040 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 USE1Q9NZ43 259 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 SLC13A4Q9UKG4 626 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 FAM186AA6NE01 2351 aa11.14□□□□□ -0.63
CCDC38-202ENST00000546386 A0A1W2PPW3 197 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 SIGLEC6O43699 453 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 CBX7O95931 251 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 MMP11P24347 488 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 RGS8P57771 180 aaPredicted RBP11.13□□□□□ -0.63
CCDC38-202ENST00000546386 KCNC4Q03721 635 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 EMX1Q04741 257 aaPredicted RBP11.13□□□□□ -0.63
CCDC38-202ENST00000546386 GXYLT1Q4G148 440 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 ZNF574Q6ZN55 896 aaPredicted RBP11.13□□□□□ -0.63
CCDC38-202ENST00000546386 PRICKLE2Q7Z3G6 844 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 OR2L13Q8N349 312 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 OR4K5Q8NGD3 323 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 GAL3ST4Q96RP7 486 aa11.13□□□□□ -0.63
CCDC38-202ENST00000546386 GAREM1Q9H706 876 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms