RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 SLC51BQ86UW2 128 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 SPEM1Q8N4L4 309 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 TMEM178AQ8NBL3 297 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 ADAMTS19Q8TE59 1207 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 GTF2H4Q92759 462 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 VWCEQ96DN2 955 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 ENY2Q9NPA8 101 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 IL17CQ9P0M4 197 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 LIPT1Q9Y234 373 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 DNAH12Q6ZR08 3092 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 LOC285095A0A1B0GVY8 99 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 A0A1W2PRQ8 180 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 EFCAB9A8MZ26 197 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 LOC110117498-PIK3R3F6TDL0 507 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 H3BML4 177 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 PDCD5O14737 125 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 B4GAT1O43505 415 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 CH25HO95992 272 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 IL3P08700 152 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 ZNF806P0C7X5 589 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 HOXB9P17482 250 aaPredicted RBP8.14□□□□□ -1.11
CLIP1-218ENST00000545889 EVI2BP34910 448 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 TAP2Q03519 686 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 NPRL3Q12980 569 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 DSG2Q14126 1118 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 KLHL22Q53GT1 634 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 KCTD11Q693B1 232 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 GPR153Q6NV75 609 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 ULK3Q6PHR2 472 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 FIGNL1Q6PIW4 674 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 NXPE4Q6UWF7 544 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 GPR26Q8NDV2 337 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 LRRC58Q96CX6 371 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 PHOX2BQ99453 314 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 NARFLQ9H6Q4 476 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 OLAHQ9NV23 265 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 OR6C2Q9NZP2 312 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 HS3ST2Q9Y278 367 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 B3GNT3Q9Y2A9 372 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 GGT3PA6NGU5 568 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 ZNF670-ZNF695F2Z2N8 137 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 EI24O14681 340 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 RDH16O75452 317 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 AK1P00568 194 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 NCK1P16333 377 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 ZNF16P17020 682 aaPredicted RBP8.14□□□□□ -1.11
CLIP1-218ENST00000545889 MAGEA6P43360 314 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 MAZP56270 477 aaKnown RBP8.14□□□□□ -1.11
CLIP1-218ENST00000545889 RAB2AP61019 212 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 TRAP1Q12931 704 aaKnown RBP8.14□□□□□ -1.11
CLIP1-218ENST00000545889 GRIK2Q13002 908 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 ADAM15Q13444 863 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 PRICKLE2Q7Z3G6 844 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 HSD11B1LQ7Z5J1 315 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 TEX26Q8N6G2 289 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 ROPN1LQ96C74 230 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 PLA2G2FQ9BZM2 168 aa8.14□□□□□ -1.11
CLIP1-218ENST00000545889 SPTAN1Q13813 2472 aaKnown RBP8.13□□□□□ -1.11
CLIP1-218ENST00000545889 RAB19A4D1S5 217 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 C17orf105B2RV13 164 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 ITGA10O75578 1167 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 S100A9P06702 114 aaKnown RBP8.13□□□□□ -1.11
CLIP1-218ENST00000545889 GPIP06744 558 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 POU3F2P20265 443 aaPredicted RBP8.13□□□□□ -1.11
CLIP1-218ENST00000545889 ARNTP27540 789 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 ELK4P28324 431 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 FMO3P31513 532 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 CASP3P42574 277 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 DOC2AQ14183 400 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 REEP3Q6NUK4 255 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 PNCKQ6P2M8 343 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 KCTD18Q6PI47 426 aaPredicted RBP8.13□□□□□ -1.11
CLIP1-218ENST00000545889 IL20RBQ6UXL0 311 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 AHSA2Q719I0 299 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 C6orf120Q7Z4R8 191 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 GPALPP1Q8IXQ4 340 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 LILRA2Q8N149 483 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 LINC00471Q8N535 108 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 OR5AR1Q8NGP9 310 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 NFKBIDQ8NI38 313 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 OR5P2Q8WZ92 322 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 UCN3Q969E3 161 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 PLSCR3Q9NRY6 295 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 FETUBQ9UGM5 382 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 MGAT4AQ9UM21 535 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 PLOD3O60568 738 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 PRAMEF2O60811 474 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 ANGPTL1O95841 491 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 PGRP06401 933 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 SPARCP09486 303 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 PVRP15151 417 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 TIMP2P16035 220 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 PTNP21246 168 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 GLP1RP43220 463 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 TMBIM6P55061 237 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 CDKN2DP55273 166 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 MS4A2Q01362 244 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 TFF2Q03403 129 aa8.13□□□□□ -1.11
CLIP1-218ENST00000545889 EEF1A2Q05639 463 aaKnown RBP8.13□□□□□ -1.11
CLIP1-218ENST00000545889 ODF4Q2M2E3 257 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms