RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 SHC2P98077 582 aa11.86□□□□□ -0.51
COL4A6-209ENST00000545689 LRRC69Q6ZNQ3 347 aa11.86□□□□□ -0.51
COL4A6-209ENST00000545689 ZER1Q7Z7L7 766 aa11.86□□□□□ -0.51
COL4A6-209ENST00000545689 SLC35F2Q8IXU6 374 aa11.86□□□□□ -0.51
COL4A6-209ENST00000545689 OR9Q2Q8NGE9 314 aa11.86□□□□□ -0.51
COL4A6-209ENST00000545689 OR8S1Q8NH09 359 aa11.86□□□□□ -0.51
COL4A6-209ENST00000545689 GTF2H4Q92759 462 aa11.86□□□□□ -0.51
COL4A6-209ENST00000545689 RBCK1Q9BYM8 510 aa11.86□□□□□ -0.51
COL4A6-209ENST00000545689 DEFB126Q9BYW3 111 aa11.86□□□□□ -0.51
COL4A6-209ENST00000545689 ACTL7AQ9Y615 435 aa11.86□□□□□ -0.51
COL4A6-209ENST00000545689 GABRR3A8MPY1 467 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 E2F3O00716 465 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 PRDX3P30048 256 aaKnown RBP11.85□□□□□ -0.51
COL4A6-209ENST00000545689 ACVR1BP36896 505 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 ZSCAN4Q8NAM6 433 aaPredicted RBP11.85□□□□□ -0.51
COL4A6-209ENST00000545689 ASB15Q8WXK1 588 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 ACSS1Q9NUB1 689 aaPredicted RBP11.85□□□□□ -0.51
COL4A6-209ENST00000545689 NOX1Q9Y5S8 564 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 FUOMA2VDF0 154 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 AGAP5A6NIR3 686 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 VSTM2BA6NLU5 285 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 CCR7P32248 378 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 PLP2Q04941 152 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 TDGQ13569 410 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 RPS26P11Q5JNZ5 115 aaPredicted RBP11.85□□□□□ -0.51
COL4A6-209ENST00000545689 ZNF767PQ75MW2 155 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 MS4A4AQ96JQ5 239 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 MGAT4CQ9UBM8 478 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 GMEB2Q9UKD1 530 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 SCO2O43819 266 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 PRLP01236 227 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 ALDOCP09972 364 aaKnown RBP11.85□□□□□ -0.51
COL4A6-209ENST00000545689 CRHBPP24387 322 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 LEG1Q6P5S2 330 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 FIGNL1Q6PIW4 674 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 TTTY10Q9BZA0 68 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 SLA2Q9H6Q3 261 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 ALKBH4Q9NXW9 302 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 PRSS21Q9Y6M0 314 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 USP54Q70EL1 1684 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 PRAF2O60831 178 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 TIMP2P16035 220 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 GJA5P36382 358 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 OPRL1P41146 370 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 WDR5P61964 334 aaKnown RBP11.85□□□□□ -0.51
COL4A6-209ENST00000545689 MRPL49Q13405 166 aaKnown RBP11.85□□□□□ -0.51
COL4A6-209ENST00000545689 LIPIQ6XZB0 460 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 GATSQ8NAP1 163 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 OR5AK2Q8NH90 309 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 TMIGD2Q96BF3 282 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 CPPED1Q9BRF8 314 aaPredicted RBP11.85□□□□□ -0.51
COL4A6-209ENST00000545689 HDHD5Q9BXW7 423 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 SLC7A7Q9UM01 511 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 A0A0J9YY10 115 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 C17orf113A0A1B0GUU1 675 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 SMAD6O43541 496 aaKnown RBP11.85□□□□□ -0.51
COL4A6-209ENST00000545689 MAGEA12P43365 314 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 SIM1P81133 766 aaPredicted RBP11.85□□□□□ -0.51
COL4A6-209ENST00000545689 RHEBQ15382 184 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 ZDHHC1Q8WTX9 485 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 HOXB13Q92826 284 aaPredicted RBP11.85□□□□□ -0.51
COL4A6-209ENST00000545689 TGM7Q96PF1 710 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 TMEM246Q9BRR3 403 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 ALG8Q9BVK2 526 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 NUBP2Q9Y5Y2 271 aa11.85□□□□□ -0.51
COL4A6-209ENST00000545689 KIAA0355O15063 1070 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 TRAPPC6AO75865 159 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 LCKP06239 509 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 MMP2P08253 660 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 CD3GP09693 182 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 UBL4AP11441 157 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 PITPNBP48739 271 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 HNRNPKP61978 463 aaKnown RBP eCLIP11.84□□□□□ -0.51
COL4A6-209ENST00000545689 LSMEM2Q8N112 164 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 SAMD8Q96LT4 415 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 APOOQ9BUR5 198 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 B4GALT7Q9UBV7 327 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 A0A1W2PQL4 384 aaPredicted RBP11.84□□□□□ -0.51
COL4A6-209ENST00000545689 A6NIZ1 184 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 LYRM1O43325 122 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 C1orf105O95561 183 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 ADH7P40394 386 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 RAP1BP61224 184 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 RAP1AP62834 184 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 HHEXQ03014 270 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 CBFBQ13951 182 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 SF3A2Q15428 464 aaKnown RBP11.84□□□□□ -0.51
COL4A6-209ENST00000545689 OR8K3Q8NH51 312 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 SEMA4FO95754 770 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 GALNT10Q86SR1 603 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 OR8J2Q8NGG1 315 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 CASTOR1Q8WTX7 329 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 CACNG6Q9BXT2 260 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 SLC5A7Q9GZV3 580 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 SRA1Q9HD15 236 aaKnown RBP11.84□□□□□ -0.51
COL4A6-209ENST00000545689 N4BP2Q86UW6 1770 aaPredicted RBP11.84□□□□□ -0.51
COL4A6-209ENST00000545689 NKX3-2P78367 333 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 BCL2L15Q5TBC7 163 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 B3GNT8Q7Z7M8 397 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 WDR20Q8TBZ3 569 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms