RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 OR7G1Q8NGA0 311 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 OR52N2Q8NGI0 321 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 FAM57AQ8TBR7 257 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 METTL6Q8TCB7 284 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 PAQR8Q8TEZ7 354 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 CHTF18Q8WVB6 975 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 UCN3Q969E3 161 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 KLHL29Q96CT2 875 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 C11orf24Q96F05 449 aaPredicted RBP7.06□□□□□ -1.28
SNHG1-223ENST00000545440 VKORC1Q9BQB6 163 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 SHCBP1LQ9BZQ2 653 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 IFT22Q9H7X7 185 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 ANKZF1Q9H8Y5 726 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 IL1RL2Q9HB29 575 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 SIRT5Q9NXA8 310 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 MKS1Q9NXB0 559 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 CNIH4Q9P003 139 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 MID2Q9UJV3 735 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 CES1P1Q9UKY3 287 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 PSME2Q9UL46 239 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 GRID1Q9ULK0 1009 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 BOKQ9UMX3 212 aaPredicted RBP7.06□□□□□ -1.28
SNHG1-223ENST00000545440 CHCHD2Q9Y6H1 151 aaPredicted RBP7.06□□□□□ -1.28
SNHG1-223ENST00000545440 NOTCH2Q04721 2471 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 KIAA1549Q9HCM3 1950 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 A0A1B0GTH9 108 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 GNG14A0A1W2PPG7 69 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 SMIM23A6NLE4 172 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 FAM166BA8MTA8 275 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 CAPN14A8MX76 684 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 COPEO14579 308 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 HNRNPRO43390 633 aaKnown RBP7.05□□□□□ -1.28
SNHG1-223ENST00000545440 PCDH7O60245 1069 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 CDC40O60508 579 aaKnown RBP eCLIP7.05□□□□□ -1.285e-11■□□□□ 11.3
SNHG1-223ENST00000545440 PLIN3O60664 434 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 IGHG3P01860 377 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 TPOP07202 933 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 NUDT17P0C025 328 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 CT62P0C5K7 136 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 KRT4P19013 534 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 NT5EP21589 574 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 GPX3P22352 226 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 DEKP35659 375 aaKnown RBP7.05□□□□□ -1.28
SNHG1-223ENST00000545440 DNASE1L1P49184 302 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 HTR6P50406 440 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 NRG3P56975 720 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 PPIAP62937 165 aaKnown RBP7.05□□□□□ -1.28
SNHG1-223ENST00000545440 KCNJ2P63252 427 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 ZNF630Q2M218 657 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-223ENST00000545440 PRICKLE4Q2TBC4 344 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 LIPMQ5VYY2 423 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 FAM219BQ5XKK7 198 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 DOLPP1Q86YN1 238 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 SAMD14Q8IZD0 417 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-223ENST00000545440 MMP21Q8N119 569 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 LRRC25Q8N386 305 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-223ENST00000545440 TMEM251Q8N6I4 163 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 CCNYL1Q8N7R7 359 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 OR10G3Q8NGC4 313 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 ZNF675Q8TD23 568 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 ADIPOR1Q96A54 375 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 TM4SF18Q96CE8 201 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 CTHRC1Q96CG8 243 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 ERP27Q96DN0 273 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 CNRIP1Q96F85 164 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-223ENST00000545440 APOPT1Q96IL0 206 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 KCNA7Q96RP8 456 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 DMRTA2Q96SC8 542 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 SECISBP2Q96T21 854 aaKnown RBP7.05□□□□□ -1.28
SNHG1-223ENST00000545440 OR10A5Q9H207 317 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 TP63Q9H3D4 680 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-223ENST00000545440 ZNF703Q9H7S9 590 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-223ENST00000545440 MID1IP1Q9NPA3 183 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 OXSMQ9NWU1 459 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 TUBA8Q9NY65 449 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-223ENST00000545440 MAT2BQ9NZL9 334 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 EHD3Q9NZN3 535 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 UTS2RQ9UKP6 389 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 CFL2Q9Y281 166 aa7.05□□□□□ -1.28
SNHG1-223ENST00000545440 A0A1B0GVC2 190 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 LRRC3CA6NJW4 275 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 NUDT19A8MXV4 375 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 G3V3Y1 287 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 UBFD1O14562 309 aaKnown RBP7.04□□□□□ -1.28
SNHG1-223ENST00000545440 ADAM10O14672 748 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 TP53I11O14683 189 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 BCKDKO14874 412 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 ACOX3O15254 700 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 CRCPO75575 148 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 ERAL1O75616 437 aaKnown RBP7.04□□□□□ -1.28
SNHG1-223ENST00000545440 RSL1D1O76021 490 aaKnown RBP7.04□□□□□ -1.28
SNHG1-223ENST00000545440 IL3P08700 152 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 CHN1P15882 459 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 S1PR1P21453 382 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 ABCD3P28288 659 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 PIGAP37287 484 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 MAGEA5P43359 124 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 ALDH9A1P49189 494 aa7.04□□□□□ -1.28
SNHG1-223ENST00000545440 NR0B1P51843 470 aaKnown RBP7.04□□□□□ -1.28
SNHG1-223ENST00000545440 FOXA1P55317 472 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms