RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 IGHV4-39P01824 125 aa13.19□□□□□ -0.3
RTN3-214ENST00000545432 CTAGE8P0CG41 777 aa13.19□□□□□ -0.3
RTN3-214ENST00000545432 CSNK2A2P19784 350 aaPredicted RBP13.19□□□□□ -0.3
RTN3-214ENST00000545432 CLDN20P56880 219 aa13.19□□□□□ -0.3
RTN3-214ENST00000545432 PDIA2Q13087 525 aaKnown RBP13.19□□□□□ -0.3
RTN3-214ENST00000545432 GANABQ14697 944 aaKnown RBP13.19□□□□□ -0.3
RTN3-214ENST00000545432 CPSF6Q16630 551 aaKnown RBP eCLIP13.19□□□□□ -0.3
RTN3-214ENST00000545432 TMEM44Q2T9K0 475 aa13.19□□□□□ -0.3
RTN3-214ENST00000545432 C6orf52Q5T4I8 152 aa13.19□□□□□ -0.3
RTN3-214ENST00000545432 C10orf62Q5T681 223 aaPredicted RBP13.19□□□□□ -0.3
RTN3-214ENST00000545432 CTAGE4Q8IX94 777 aa13.19□□□□□ -0.3
RTN3-214ENST00000545432 UBQLNLQ8IYU4 475 aa13.19□□□□□ -0.3
RTN3-214ENST00000545432 METTL4Q8N3J2 472 aa13.19□□□□□ -0.3
RTN3-214ENST00000545432 OR2M3Q8NG83 312 aa13.19□□□□□ -0.3
RTN3-214ENST00000545432 RAB3IL1Q8TBN0 382 aa13.19□□□□□ -0.3
RTN3-214ENST00000545432 TM4SF18Q96CE8 201 aa13.19□□□□□ -0.3
RTN3-214ENST00000545432 GMPPAQ96IJ6 420 aaPredicted RBP13.19□□□□□ -0.3
RTN3-214ENST00000545432 VSTM2LQ96N03 204 aa13.19□□□□□ -0.3
RTN3-214ENST00000545432 OSBPL9Q96SU4 736 aa13.19□□□□□ -0.3
RTN3-214ENST00000545432 ADOQ96SZ5 270 aa13.19□□□□□ -0.3
RTN3-214ENST00000545432 BRINP2Q9C0B6 783 aa13.19□□□□□ -0.3
RTN3-214ENST00000545432 LRTM1Q9HBL6 345 aa13.19□□□□□ -0.3
RTN3-214ENST00000545432 ZBTB26Q9HCK0 441 aa13.19□□□□□ -0.3
RTN3-214ENST00000545432 RNF11Q9Y3C5 154 aa13.19□□□□□ -0.3
RTN3-214ENST00000545432 ALPK2Q86TB3 2170 aa13.19□□□□□ -0.3
RTN3-214ENST00000545432 OR2M5A3KFT3 312 aa13.18□□□□□ -0.3
RTN3-214ENST00000545432 C17orf51A8MQB3 221 aa13.18□□□□□ -0.3
RTN3-214ENST00000545432 FADS1O60427 444 aa13.18□□□□□ -0.3
RTN3-214ENST00000545432 ALDOAP04075 364 aaKnown RBP13.18□□□□□ -0.3
RTN3-214ENST00000545432 KLK1P06870 262 aa13.18□□□□□ -0.3
RTN3-214ENST00000545432 FCGR2AP12318 317 aa13.18□□□□□ -0.3
RTN3-214ENST00000545432 FEN1P39748 380 aaKnown RBP13.18□□□□□ -0.3
RTN3-214ENST00000545432 GP5P40197 560 aa13.18□□□□□ -0.3
RTN3-214ENST00000545432 NCMAPQ5T1S8 102 aa13.18□□□□□ -0.3
RTN3-214ENST00000545432 BEND4Q6ZU67 534 aa13.18□□□□□ -0.3
RTN3-214ENST00000545432 ADCY4Q8NFM4 1077 aa13.18□□□□□ -0.3
RTN3-214ENST00000545432 OR10H5Q8NGA6 315 aa13.18□□□□□ -0.3
RTN3-214ENST00000545432 SMAP2Q8WU79 429 aaPredicted RBP13.18□□□□□ -0.3
RTN3-214ENST00000545432 FBXW5Q969U6 566 aa13.18□□□□□ -0.3
RTN3-214ENST00000545432 CNRIP1Q96F85 164 aaPredicted RBP13.18□□□□□ -0.3
RTN3-214ENST00000545432 ACTR6Q9GZN1 396 aa13.18□□□□□ -0.3
RTN3-214ENST00000545432 DSN1Q9H410 356 aa13.18□□□□□ -0.3
RTN3-214ENST00000545432 LIPT1Q9Y234 373 aa13.18□□□□□ -0.3
RTN3-214ENST00000545432 SVEP1Q4LDE5 3571 aa13.17□□□□□ -0.3
RTN3-214ENST00000545432 FAM159BA6NKW6 160 aa13.17□□□□□ -0.3
RTN3-214ENST00000545432 SUPT3HB4E1H0 165 aa13.17□□□□□ -0.3
RTN3-214ENST00000545432 GUCY1B2O75343 617 aa13.17□□□□□ -0.3
RTN3-214ENST00000545432 SUPT3HO75486 399 aa13.17□□□□□ -0.3
RTN3-214ENST00000545432 CD8AP01732 235 aa13.17□□□□□ -0.3
RTN3-214ENST00000545432 PCSK2P16519 638 aa13.17□□□□□ -0.3
RTN3-214ENST00000545432 HK1P19367 917 aa13.17□□□□□ -0.3
RTN3-214ENST00000545432 RPS3AP61247 264 aaKnown RBP13.17□□□□□ -0.3
RTN3-214ENST00000545432 ZNF844Q08AG5 666 aa13.17□□□□□ -0.3
RTN3-214ENST00000545432 SLMAPQ14BN4 828 aa13.17□□□□□ -0.3
RTN3-214ENST00000545432 EXOC3L2Q2M3D2 409 aa13.17□□□□□ -0.3
RTN3-214ENST00000545432 PGGHGQ32M88 737 aa13.17□□□□□ -0.3
RTN3-214ENST00000545432 ZNF628Q5EBL2 1059 aa13.17□□□□□ -0.3
RTN3-214ENST00000545432 NPSR1Q6W5P4 371 aa13.17□□□□□ -0.3
RTN3-214ENST00000545432 PAGE2Q7Z2X7 111 aa13.17□□□□□ -0.3
RTN3-214ENST00000545432 GGNQ86UU5 652 aa13.17□□□□□ -0.3
RTN3-214ENST00000545432 DTX2Q86UW9 622 aa13.17□□□□□ -0.3
RTN3-214ENST00000545432 EXOC3L1Q86VI1 746 aa13.17□□□□□ -0.3
RTN3-214ENST00000545432 GAS2L3Q86XJ1 694 aa13.17□□□□□ -0.3
RTN3-214ENST00000545432 OR4K17Q8NGC6 315 aa13.17□□□□□ -0.3
RTN3-214ENST00000545432 EXT2Q93063 718 aa13.17□□□□□ -0.3
RTN3-214ENST00000545432 GFM2Q969S9 779 aaKnown RBP13.17□□□□□ -0.3
RTN3-214ENST00000545432 NTMT1Q9BV86 223 aa13.17□□□□□ -0.3
RTN3-214ENST00000545432 IPPKQ9H8X2 491 aa13.17□□□□□ -0.3
RTN3-214ENST00000545432 PRM3Q9NNZ6 103 aa13.17□□□□□ -0.3
RTN3-214ENST00000545432 FANCFQ9NPI8 374 aa13.17□□□□□ -0.3
RTN3-214ENST00000545432 GLRX2Q9NS18 164 aa13.17□□□□□ -0.3
RTN3-214ENST00000545432 EMC9Q9Y3B6 208 aa13.17□□□□□ -0.3
RTN3-214ENST00000545432 MAGED1Q9Y5V3 778 aaPredicted RBP13.17□□□□□ -0.3
RTN3-214ENST00000545432 AP4B1Q9Y6B7 739 aa13.17□□□□□ -0.3
RTN3-214ENST00000545432 GPRIN2O60269 458 aa13.16□□□□□ -0.3
RTN3-214ENST00000545432 ADAM11O75078 769 aa13.16□□□□□ -0.3
RTN3-214ENST00000545432 NDUFS7O75251 213 aa13.16□□□□□ -0.3
RTN3-214ENST00000545432 CLDN9O95484 217 aa13.16□□□□□ -0.3
RTN3-214ENST00000545432 LTA4HP09960 611 aaKnown RBP13.16□□□□□ -0.3
RTN3-214ENST00000545432 CRABP2P29373 138 aa13.16□□□□□ -0.3
RTN3-214ENST00000545432 DEKP35659 375 aaKnown RBP13.16□□□□□ -0.3
RTN3-214ENST00000545432 CDKN1AP38936 164 aa13.16□□□□□ -0.3
RTN3-214ENST00000545432 SLC6A8P48029 635 aa13.16□□□□□ -0.3
RTN3-214ENST00000545432 ALDH18A1P54886 795 aaKnown RBP13.16□□□□□ -0.3
RTN3-214ENST00000545432 TRA2BP62995 288 aaKnown RBP13.16□□□□□ -0.3
RTN3-214ENST00000545432 MRPS22P82650 360 aaKnown RBP13.16□□□□□ -0.3
RTN3-214ENST00000545432 VLDLRP98155 873 aa13.16□□□□□ -0.3
RTN3-214ENST00000545432 LOXL1Q08397 574 aaPredicted RBP13.16□□□□□ -0.3
RTN3-214ENST00000545432 GTF2H2Q13888 395 aa13.16□□□□□ -0.3
RTN3-214ENST00000545432 LTB4RQ15722 352 aa13.16□□□□□ -0.3
RTN3-214ENST00000545432 ZNF672Q499Z4 452 aaPredicted RBP13.16□□□□□ -0.3
RTN3-214ENST00000545432 CCNYL2Q5T2Q4 361 aa13.16□□□□□ -0.3
RTN3-214ENST00000545432 FRG2Q64ET8 278 aa13.16□□□□□ -0.3
RTN3-214ENST00000545432 GTF2H2CQ6P1K8 395 aa13.16□□□□□ -0.3
RTN3-214ENST00000545432 SEZ6L2Q6UXD5 910 aa13.16□□□□□ -0.3
RTN3-214ENST00000545432 LARP4Q71RC2 724 aaKnown RBP eCLIP13.16□□□□□ -0.3
RTN3-214ENST00000545432 GOLGA7Q7Z5G4 137 aa13.16□□□□□ -0.3
RTN3-214ENST00000545432 MYLK4Q86YV6 388 aaPredicted RBP13.16□□□□□ -0.3
RTN3-214ENST00000545432 WFDC8Q8IUA0 241 aa13.16□□□□□ -0.3
RTN3-214ENST00000545432 CDKL2Q92772 493 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms