RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 RPS4XP62701 263 aaKnown RBP3.49□□□□□ -1.85
SNHG1-222ENST00000545308 IRX3P78415 501 aaPredicted RBP3.49□□□□□ -1.85
SNHG1-222ENST00000545308 NAAAQ02083 359 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 POU3F1Q03052 451 aaPredicted RBP3.49□□□□□ -1.85
SNHG1-222ENST00000545308 NME3Q13232 169 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 GCKRQ14397 625 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 P2RY14Q15391 338 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 USH1GQ495M9 461 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 TMEM41BQ5BJD5 291 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 NEPROQ6NW34 567 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 RGS9BPQ6ZS82 235 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 CATSPERDQ86XM0 798 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 OR4N5Q8IXE1 308 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 FADS6Q8N9I5 356 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 OR5M9Q8NGP3 310 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 RPLP0P6Q8NHW5 317 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 GOLGA5Q8TBA6 731 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 ATP8B4Q8TF62 1192 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 BADQ92934 168 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 PLEKHF1Q96S99 279 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 DCTN5Q9BTE1 182 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 FUCA2Q9BTY2 467 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 NDUFAF3Q9BU61 184 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 MRPL13Q9BYD1 178 aaKnown RBP3.49□□□□□ -1.85
SNHG1-222ENST00000545308 NT5C3AQ9H0P0 336 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 FAM124BQ9H5Z6 455 aaPredicted RBP3.49□□□□□ -1.85
SNHG1-222ENST00000545308 CALHM2Q9HA72 323 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 SLC25A19Q9HC21 320 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 BCAP29Q9UHQ4 241 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 KCNG2Q9UJ96 466 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 ZNF175Q9Y473 711 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 KIF3AQ9Y496 699 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 MYH2Q9UKX2 1941 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 MROH7Q68CQ1 1323 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 MUC3AQ02505 3323 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 A0A087WW49 117 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 OR5H15A6NDH6 313 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 IFITM10A6NMD0 228 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 C15orf61A6NNL5 157 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 PMS2P5A8MQ11 134 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 H0YCG3 227 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 BLOC1S5-TXNDC5H3BN57 136 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 HMBSP08397 361 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 THRBP10828 461 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 EPB41P11171 864 aaKnown RBP3.48□□□□□ -1.85
SNHG1-222ENST00000545308 PRG2P13727 222 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 GP9P14770 177 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 MYOGP15173 224 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 DRD5P21918 477 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 HNRNPA2B1P22626 353 aaKnown RBP3.48□□□□□ -1.85
SNHG1-222ENST00000545308 PTPN6P29350 595 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 TRIM23P36406 574 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 PTGFRP43088 359 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 SNTB2Q13425 540 aaKnown RBP3.48□□□□□ -1.85
SNHG1-222ENST00000545308 CCDC6Q16204 474 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 ZNF699Q32M78 642 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 MAJINQ3KP22 176 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 ANKRD55Q3KP44 614 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 NADK2Q4G0N4 442 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 ARHGAP17Q68EM7 881 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 ZNF730Q6ZMV8 503 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 TMEM110Q86TL2 294 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 GCNT2Q8N0V5 402 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 FAM133AQ8N9E0 248 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 OR5T2Q8NGG2 359 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 MAPK15Q8TD08 544 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 SLC5A11Q8WWX8 675 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 PNPLA2Q96AD5 504 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 NAP1L5Q96NT1 182 aaPredicted RBP3.48□□□□□ -1.85
SNHG1-222ENST00000545308 UPF3BQ9BZI7 483 aaKnown RBP3.48□□□□□ -1.85
SNHG1-222ENST00000545308 TMEM117Q9H0C3 514 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 STARD5Q9NSY2 213 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 RABL2BQ9UNT1 228 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 SLC6A5Q9Y345 797 aa3.48□□□□□ -1.85
SNHG1-222ENST00000545308 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.48□□□□□ -1.85
SNHG1-222ENST00000545308 MROH5Q6ZUA9 1318 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 FRMPD3Q5JV73 1810 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 GPR89AB7ZAQ6 455 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 E2F3O00716 465 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 SDHDO14521 159 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 RIPK2O43353 540 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 PCDH7O60245 1069 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 SPAG6O75602 509 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 STK17BO94768 372 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 OR4F21O95013 312 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 MBD3O95983 291 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 GOT2P00505 430 aaKnown RBP3.47□□□□□ -1.85
SNHG1-222ENST00000545308 RPLP0P05388 317 aaKnown RBP3.47□□□□□ -1.85
SNHG1-222ENST00000545308 FCER2P06734 321 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 FHP07954 510 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 PATE4P0C8F1 98 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 GPR89BP0CG08 455 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 CLUP10909 449 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 CEBPBP17676 345 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 PSMA5P28066 241 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 GPR183P32249 361 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 OPRL1P41146 370 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 SLC1A6P48664 564 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 SGSHP51688 502 aa3.47□□□□□ -1.85
SNHG1-222ENST00000545308 METAP1P53582 386 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms