RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 EXO1Q9UQ84 846 aaKnown RBP10.81□□□□□ -0.68
HDAC4-216ENST00000544989 RAP2CQ9Y3L5 183 aa10.81□□□□□ -0.68
HDAC4-216ENST00000544989 NINQ8N4C6 2090 aa10.81□□□□□ -0.68
HDAC4-216ENST00000544989 MTORP42345 2549 aa10.81□□□□□ -0.68
HDAC4-216ENST00000544989 NCOA6Q14686 2063 aaPredicted RBP10.8□□□□□ -0.68
HDAC4-216ENST00000544989 F8P00451 2351 aa10.8□□□□□ -0.68
HDAC4-216ENST00000544989 EML6Q6ZMW3 1958 aa10.8□□□□□ -0.68
HDAC4-216ENST00000544989 SNPHO15079 494 aa10.8□□□□□ -0.68
HDAC4-216ENST00000544989 SCAMP2O15127 329 aaKnown RBP10.8□□□□□ -0.68
HDAC4-216ENST00000544989 AKAP10O43572 662 aa10.8□□□□□ -0.68
HDAC4-216ENST00000544989 TSPAN2O60636 221 aa10.8□□□□□ -0.68
HDAC4-216ENST00000544989 ICOSLGO75144 302 aa10.8□□□□□ -0.68
HDAC4-216ENST00000544989 PEX11AO75192 247 aa10.8□□□□□ -0.68
HDAC4-216ENST00000544989 UGT2B11O75310 529 aa10.8□□□□□ -0.68
HDAC4-216ENST00000544989 TRAPPC6AO75865 159 aa10.8□□□□□ -0.68
HDAC4-216ENST00000544989 KCNH1O95259 989 aa10.8□□□□□ -0.68
HDAC4-216ENST00000544989 RFPL3SP0C7P2 107 aa10.8□□□□□ -0.68
HDAC4-216ENST00000544989 CHRNB4P30926 498 aa10.8□□□□□ -0.68
HDAC4-216ENST00000544989 RPL14P50914 215 aaKnown RBP10.8□□□□□ -0.68
HDAC4-216ENST00000544989 CORO7P57737 925 aa10.8□□□□□ -0.68
HDAC4-216ENST00000544989 PRR5P85299 388 aa10.8□□□□□ -0.68
HDAC4-216ENST00000544989 HSPB3Q12988 150 aa10.8□□□□□ -0.68
HDAC4-216ENST00000544989 NHSL2Q5HYW2 709 aa10.8□□□□□ -0.68
HDAC4-216ENST00000544989 C6orf136Q5SQH8 315 aa10.8□□□□□ -0.68
HDAC4-216ENST00000544989 HHATQ5VTY9 493 aa10.8□□□□□ -0.68
HDAC4-216ENST00000544989 SP5Q6BEB4 398 aaPredicted RBP10.8□□□□□ -0.68
HDAC4-216ENST00000544989 ANGPTL8Q6UXH0 198 aa10.8□□□□□ -0.68
HDAC4-216ENST00000544989 B3GNT6Q6ZMB0 384 aa10.8□□□□□ -0.68
HDAC4-216ENST00000544989 CDRT4Q8N9R6 151 aa10.8□□□□□ -0.68
HDAC4-216ENST00000544989 AGR3Q8TD06 166 aa10.8□□□□□ -0.68
HDAC4-216ENST00000544989 GFM2Q969S9 779 aaKnown RBP10.8□□□□□ -0.68
HDAC4-216ENST00000544989 TUBGCP3Q96CW5 907 aa10.8□□□□□ -0.68
HDAC4-216ENST00000544989 ADOQ96SZ5 270 aa10.8□□□□□ -0.68
HDAC4-216ENST00000544989 LMF2Q9BU23 707 aaKnown RBP10.8□□□□□ -0.68
HDAC4-216ENST00000544989 SDHAF3Q9NRP4 125 aa10.8□□□□□ -0.68
HDAC4-216ENST00000544989 ASIC5Q9NY37 505 aa10.8□□□□□ -0.68
HDAC4-216ENST00000544989 NOP53Q9NZM5 478 aaKnown RBP10.8□□□□□ -0.68
HDAC4-216ENST00000544989 NTMQ9P121 344 aa10.8□□□□□ -0.68
HDAC4-216ENST00000544989 CBLCQ9ULV8 474 aa10.8□□□□□ -0.68
HDAC4-216ENST00000544989 LIPGQ9Y5X9 500 aa10.8□□□□□ -0.68
HDAC4-216ENST00000544989 HIVEP1P15822 2718 aa10.8□□□□□ -0.68
HDAC4-216ENST00000544989 C15orf38-AP3S2A0A0A6YYH1 394 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 WDR91A4D1P6 747 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 AHRRA9YTQ3 701 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 SKAP2O75563 359 aaPredicted RBP10.79□□□□□ -0.68
HDAC4-216ENST00000544989 LRATO95237 230 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 ACTL6AO96019 429 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 KRT16P08779 473 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 CELA3AP09093 270 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 PTPN6P29350 595 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 LCN1P31025 176 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 SLC1A6P48664 564 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 C21orf58P58505 322 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 PSG6Q00889 435 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 EMX2Q04743 252 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 STX3Q13277 289 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 TOMM20Q15388 145 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 LSM12Q3MHD2 195 aaKnown RBP10.79□□□□□ -0.68
HDAC4-216ENST00000544989 EMC4Q5J8M3 183 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 CPTPQ5TA50 214 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 BICRALQ6AI39 1079 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 ZNF585AQ6P3V2 769 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 NPSR1Q6W5P4 371 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 C3P1Q6ZMU1 363 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 PLCZ1Q86YW0 608 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 TRIM42Q8IWZ5 723 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 SIMC1Q8NDZ2 872 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 OR5M9Q8NGP3 310 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 RAB3IL1Q8TBN0 382 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 MOAP1Q96BY2 351 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 SDCCAG3Q96C92 435 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 GNRHR2Q96P88 292 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 MS4A4EQ96PG1 132 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 NODALQ96S42 347 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 ANKRA2Q9H9E1 313 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 NEUROD4Q9HD90 331 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 PNPLA3Q9NST1 481 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 NKIRAS1Q9NYS0 192 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 BAIAP2L1Q9UHR4 511 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 HAO1Q9UJM8 370 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 MRPS18CQ9Y3D5 142 aaKnown RBP10.79□□□□□ -0.68
HDAC4-216ENST00000544989 WIF1Q9Y5W5 379 aa10.79□□□□□ -0.68
HDAC4-216ENST00000544989 EXPH5Q8NEV8 1989 aa10.78□□□□□ -0.68
HDAC4-216ENST00000544989 GNB5O14775 395 aa10.78□□□□□ -0.68
HDAC4-216ENST00000544989 EMC8O43402 210 aa10.78□□□□□ -0.68
HDAC4-216ENST00000544989 IL33O95760 270 aa10.78□□□□□ -0.68
HDAC4-216ENST00000544989 COX6B1P14854 86 aa10.78□□□□□ -0.68
HDAC4-216ENST00000544989 ARRB2P32121 409 aa10.78□□□□□ -0.68
HDAC4-216ENST00000544989 EVI2BP34910 448 aa10.78□□□□□ -0.68
HDAC4-216ENST00000544989 PMPCAQ10713 525 aa10.78□□□□□ -0.68
HDAC4-216ENST00000544989 GANABQ14697 944 aaKnown RBP10.78□□□□□ -0.68
HDAC4-216ENST00000544989 PRSS53Q2L4Q9 553 aa10.78□□□□□ -0.68
HDAC4-216ENST00000544989 BEND6Q5SZJ8 279 aaPredicted RBP10.78□□□□□ -0.68
HDAC4-216ENST00000544989 C1orf185Q5T7R7 199 aa10.78□□□□□ -0.68
HDAC4-216ENST00000544989 FNDC7Q5VTL7 733 aa10.78□□□□□ -0.68
HDAC4-216ENST00000544989 IL23RQ5VWK5 629 aa10.78□□□□□ -0.68
HDAC4-216ENST00000544989 ATG16L1Q676U5 607 aa10.78□□□□□ -0.68
HDAC4-216ENST00000544989 AAGABQ6PD74 315 aa10.78□□□□□ -0.68
HDAC4-216ENST00000544989 BHLHB9Q6PI77 547 aa10.78□□□□□ -0.68
HDAC4-216ENST00000544989 ENPP6Q6UWR7 440 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms