RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 RCN3Q96D15 328 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 SLC35A4Q96G79 324 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 C5orf34Q96MH7 638 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 SERHL2Q9H4I8 314 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 DUSP22Q9NRW4 184 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 SLC25A37Q9NYZ2 338 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 MAP10Q9P2G4 905 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 TRAV17A0A0B4J275 112 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 TP53I11O14683 189 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 AIM2O14862 343 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 SLC25A12O75746 678 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 UNC5CO95185 931 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 AGR2O95994 175 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 OR12D1P0DN82 309 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 CD46P15529 392 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 NAGAP17050 411 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 HOXB9P17482 250 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 PPIBP23284 216 aaKnown RBP13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 PRDX6P30041 224 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 PIGAP37287 484 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 MAN2A2P49641 1150 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 PSMD4P55036 377 aaKnown RBP13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 MRPS22P82650 360 aaKnown RBP13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 NTRK2Q16620 822 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 TRMT5Q32P41 509 aaKnown RBP13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 ZNF791Q3KP31 576 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 ATAD3BQ5T9A4 648 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 BCORP1Q8N888 145 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 OR10G3Q8NGC4 313 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 MIPOL1Q8TD10 442 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 XAGE5Q8WWM1 108 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 SGCZQ96LD1 299 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 ADOQ96SZ5 270 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 CGREF1Q99674 301 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 BTBD2Q9BX70 525 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 RAD21L1Q9H4I0 556 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 TRIM45Q9H8W5 580 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 EXD2Q9NVH0 621 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 GID8Q9NWU2 228 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 GIN1Q9NXP7 522 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 KCNE3Q9Y6H6 103 aa13.34□□□□□ -0.27
TNFRSF1A-216ENST00000543995 DSPP15924 2871 aaKnown RBP13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 EVPLLA8MZ36 301 aa13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 ATXN7O15265 892 aaPredicted RBP13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 ASNA1O43681 348 aa13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 NEURL1O76050 574 aa13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 KCNK2O95069 426 aa13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 RPP38P78345 283 aaKnown RBP13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 CAPRIN1Q14444 709 aaKnown RBP13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 ZNF169Q14929 603 aaPredicted RBP13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 NADK2Q4G0N4 442 aa13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 ZNF766Q5HY98 468 aa13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 COX20Q5RI15 118 aa13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 EXOSC6Q5RKV6 272 aaKnown RBP13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 CCNJQ5T5M9 372 aa13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 FIGNL1Q6PIW4 674 aa13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 C16orf62Q7Z3J2 963 aa13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 GALNT10Q86SR1 603 aa13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 PTRH1Q86Y79 214 aaKnown RBP13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 MSRB3Q8IXL7 192 aa13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 FITM2Q8N6M3 262 aa13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 TEX19Q8NA77 164 aa13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 PSD4Q8NDX1 1056 aa13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 MDS2Q8NDY4 140 aa13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 OR52N2Q8NGI0 321 aa13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 DIO2Q92813 273 aa13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 RAB8BQ92930 207 aa13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 LRRC58Q96CX6 371 aa13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 COL21A1Q96P44 957 aa13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 THUMPD3Q9BV44 507 aaKnown RBP13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 EFCAB1Q9HAE3 211 aa13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 TIMMDC1Q9NPL8 285 aa13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 KLHL1Q9NR64 748 aa13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 CORO2BQ9UQ03 480 aa13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 B3GNT3Q9Y2A9 372 aa13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 EML6Q6ZMW3 1958 aa13.33□□□□□ -0.28
TNFRSF1A-216ENST00000543995 TRBV5-3A0A0A0MS03 114 aa13.32□□□□□ -0.28
TNFRSF1A-216ENST00000543995 OR6C70A6NIJ9 312 aa13.32□□□□□ -0.28
TNFRSF1A-216ENST00000543995 HS6ST1O60243 411 aa13.32□□□□□ -0.28
TNFRSF1A-216ENST00000543995 TSPAN2O60636 221 aa13.32□□□□□ -0.28
TNFRSF1A-216ENST00000543995 ABCB7O75027 752 aa13.32□□□□□ -0.28
TNFRSF1A-216ENST00000543995 UGT2B11O75310 529 aa13.32□□□□□ -0.28
TNFRSF1A-216ENST00000543995 NPPAP01160 153 aa13.32□□□□□ -0.28
TNFRSF1A-216ENST00000543995 P04436 131 aa13.32□□□□□ -0.28
TNFRSF1A-216ENST00000543995 SP1P08047 785 aa13.32□□□□□ -0.28
TNFRSF1A-216ENST00000543995 ATP6V1C1P21283 382 aa13.32□□□□□ -0.28
TNFRSF1A-216ENST00000543995 NUDT2P50583 147 aa13.32□□□□□ -0.28
TNFRSF1A-216ENST00000543995 PNLIPRP2P54317 469 aa13.32□□□□□ -0.28
TNFRSF1A-216ENST00000543995 TXNL4AP83876 142 aaKnown RBP13.32□□□□□ -0.28
TNFRSF1A-216ENST00000543995 ART3Q13508 389 aa13.32□□□□□ -0.28
TNFRSF1A-216ENST00000543995 EFR3AQ14156 821 aa13.32□□□□□ -0.28
TNFRSF1A-216ENST00000543995 RGNQ15493 299 aa13.32□□□□□ -0.28
TNFRSF1A-216ENST00000543995 RUNDC3AQ59EK9 446 aa13.32□□□□□ -0.28
TNFRSF1A-216ENST00000543995 DCST2Q5T1A1 773 aa13.32□□□□□ -0.28
TNFRSF1A-216ENST00000543995 SLC22A10Q63ZE4 541 aa13.32□□□□□ -0.28
TNFRSF1A-216ENST00000543995 SLC25A25Q6KCM7 469 aa13.32□□□□□ -0.28
TNFRSF1A-216ENST00000543995 Q6ZS92 163 aa13.32□□□□□ -0.28
TNFRSF1A-216ENST00000543995 NUP54Q7Z3B4 507 aa13.32□□□□□ -0.28
TNFRSF1A-216ENST00000543995 MDGA2Q7Z553 956 aa13.32□□□□□ -0.28
TNFRSF1A-216ENST00000543995 ZNF227Q86WZ6 799 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms