RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 PSPHP78330 225 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 LRRC74AQ0VAA2 488 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 VPS26BQ4G0F5 336 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 CYP27C1Q4G0S4 372 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 SAXO2Q658L1 398 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 CDC73Q6P1J9 531 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 ZCCHC12Q6PEW1 402 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 SLC2A7Q6PXP3 512 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 FAM180AQ6UWF9 173 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 DNAJC14Q6Y2X3 702 aaPredicted RBP13.86□□□□□ -0.19
CD9-210ENST00000543916 GK5Q6ZS86 529 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 NUP54Q7Z3B4 507 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 BCORP1Q8N888 145 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 CDS1Q92903 461 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 EFHD2Q96C19 240 aaPredicted RBP13.86□□□□□ -0.19
CD9-210ENST00000543916 SPDL1Q96EA4 605 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 RMND5BQ96G75 393 aaPredicted RBP13.86□□□□□ -0.19
CD9-210ENST00000543916 SLC35G5Q96KT7 338 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 COL21A1Q96P44 957 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 NODALQ96S42 347 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 ADOQ96SZ5 270 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 BARD1Q99728 777 aaKnown RBP13.86□□□□□ -0.19
CD9-210ENST00000543916 SLC35A5Q9BS91 424 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 ACTRT3Q9BYD9 372 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 FAM107BQ9H098 131 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 TMEM45AQ9NWC5 275 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 CNIH4Q9P003 139 aa13.86□□□□□ -0.19
CD9-210ENST00000543916 PRRC2CQ9Y520 2896 aaKnown RBP13.85□□□□□ -0.19
CD9-210ENST00000543916 SHANK1Q9Y566 2161 aa13.85□□□□□ -0.19
CD9-210ENST00000543916 GMNCA6NCL1 334 aa13.85□□□□□ -0.19
CD9-210ENST00000543916 KLRC4-KLRK1H3BQV0 150 aa13.85□□□□□ -0.19
CD9-210ENST00000543916 RFXANKO14593 260 aa13.85□□□□□ -0.19
CD9-210ENST00000543916 KRT20P35900 424 aa13.85□□□□□ -0.19
CD9-210ENST00000543916 PNLIPRP2P54317 469 aa13.85□□□□□ -0.19
CD9-210ENST00000543916 CASP9P55211 416 aa13.85□□□□□ -0.19
CD9-210ENST00000543916 MRPS22P82650 360 aaKnown RBP13.85□□□□□ -0.19
CD9-210ENST00000543916 GTDC1Q4AE62 458 aa13.85□□□□□ -0.19
CD9-210ENST00000543916 RNFT1Q5M7Z0 435 aa13.85□□□□□ -0.19
CD9-210ENST00000543916 ZNF324BQ6AW86 544 aaPredicted RBP13.85□□□□□ -0.19
CD9-210ENST00000543916 BHLHB9Q6PI77 547 aa13.85□□□□□ -0.19
CD9-210ENST00000543916 ZNF621Q6ZSS3 439 aa13.85□□□□□ -0.19
CD9-210ENST00000543916 SPATA21Q7Z572 469 aa13.85□□□□□ -0.19
CD9-210ENST00000543916 GALNT10Q86SR1 603 aa13.85□□□□□ -0.19
CD9-210ENST00000543916 ZNF605Q86T29 641 aa13.85□□□□□ -0.19
CD9-210ENST00000543916 FAM98AQ8NCA5 519 aaKnown RBP13.85□□□□□ -0.19
CD9-210ENST00000543916 OR5D16Q8NGK9 328 aa13.85□□□□□ -0.19
CD9-210ENST00000543916 GTF2H4Q92759 462 aa13.85□□□□□ -0.19
CD9-210ENST00000543916 DIO2Q92813 273 aa13.85□□□□□ -0.19
CD9-210ENST00000543916 NEURL3Q96EH8 262 aa13.85□□□□□ -0.19
CD9-210ENST00000543916 ITCHQ96J02 903 aa13.85□□□□□ -0.19
CD9-210ENST00000543916 OR7D2Q96RA2 312 aa13.85□□□□□ -0.19
CD9-210ENST00000543916 SECISBP2Q96T21 854 aaKnown RBP13.85□□□□□ -0.19
CD9-210ENST00000543916 STACQ99469 402 aa13.85□□□□□ -0.19
CD9-210ENST00000543916 ELAC2Q9BQ52 826 aaKnown RBP13.85□□□□□ -0.19
CD9-210ENST00000543916 FAM173AQ9BQD7 235 aa13.85□□□□□ -0.19
CD9-210ENST00000543916 PIGUQ9H490 435 aa13.85□□□□□ -0.19
CD9-210ENST00000543916 RABEP2Q9H5N1 569 aa13.85□□□□□ -0.19
CD9-210ENST00000543916 RMND5AQ9H871 391 aa13.85□□□□□ -0.19
CD9-210ENST00000543916 DUSP22Q9NRW4 184 aa13.85□□□□□ -0.19
CD9-210ENST00000543916 TUBA8Q9NY65 449 aaPredicted RBP13.85□□□□□ -0.19
CD9-210ENST00000543916 VPS4AQ9UN37 437 aa13.85□□□□□ -0.19
CD9-210ENST00000543916 FAF1Q9UNN5 650 aaPredicted RBP13.85□□□□□ -0.19
CD9-210ENST00000543916 KCNE3Q9Y6H6 103 aa13.85□□□□□ -0.19
CD9-210ENST00000543916 NCKAP5O14513 1909 aa13.85□□□□□ -0.19
CD9-210ENST00000543916 CNTRLQ7Z7A1 2325 aa13.84□□□□□ -0.19
CD9-210ENST00000543916 ABCB7O75027 752 aa13.84□□□□□ -0.19
CD9-210ENST00000543916 WISP2O76076 250 aa13.84□□□□□ -0.19
CD9-210ENST00000543916 KCNK2O95069 426 aa13.84□□□□□ -0.19
CD9-210ENST00000543916 KCNH1O95259 989 aa13.84□□□□□ -0.19
CD9-210ENST00000543916 IL33O95760 270 aa13.84□□□□□ -0.19
CD9-210ENST00000543916 CYP4B1P13584 511 aa13.84□□□□□ -0.19
CD9-210ENST00000543916 HOXB9P17482 250 aaPredicted RBP13.84□□□□□ -0.19
CD9-210ENST00000543916 MATN1P21941 496 aa13.84□□□□□ -0.19
CD9-210ENST00000543916 MST1P26927 711 aa13.84□□□□□ -0.19
CD9-210ENST00000543916 PTPN6P29350 595 aa13.84□□□□□ -0.19
CD9-210ENST00000543916 CHI3L1P36222 383 aaPredicted RBP13.84□□□□□ -0.19
CD9-210ENST00000543916 PTGDSP41222 190 aa13.84□□□□□ -0.19
CD9-210ENST00000543916 CASP3P42574 277 aa13.84□□□□□ -0.19
CD9-210ENST00000543916 RFX3P48380 749 aa13.84□□□□□ -0.19
CD9-210ENST00000543916 FOXO1Q12778 655 aa13.84□□□□□ -0.19
CD9-210ENST00000543916 EFR3AQ14156 821 aa13.84□□□□□ -0.19
CD9-210ENST00000543916 UBAP2LQ14157 1087 aaKnown RBP13.84□□□□□ -0.19
CD9-210ENST00000543916 IGFBP7Q16270 282 aa13.84□□□□□ -0.19
CD9-210ENST00000543916 DECR1Q16698 335 aa13.84□□□□□ -0.19
CD9-210ENST00000543916 C6orf10Q5SRN2 563 aa13.84□□□□□ -0.19
CD9-210ENST00000543916 CCNJQ5T5M9 372 aa13.84□□□□□ -0.19
CD9-210ENST00000543916 FIGNL1Q6PIW4 674 aa13.84□□□□□ -0.19
CD9-210ENST00000543916 ZAR1Q86SH2 424 aa13.84□□□□□ -0.19
CD9-210ENST00000543916 COX18Q8N8Q8 333 aa13.84□□□□□ -0.19
CD9-210ENST00000543916 ZFP62Q8NB50 900 aaPredicted RBP13.84□□□□□ -0.19
CD9-210ENST00000543916 DNAJB8Q8NHS0 232 aa13.84□□□□□ -0.19
CD9-210ENST00000543916 FAM110BQ8TC76 370 aa13.84□□□□□ -0.19
CD9-210ENST00000543916 ADAMTS15Q8TE58 950 aa13.84□□□□□ -0.19
CD9-210ENST00000543916 FAR1Q8WVX9 515 aa13.84□□□□□ -0.19
CD9-210ENST00000543916 MIB2Q96AX9 1013 aa13.84□□□□□ -0.19
CD9-210ENST00000543916 NTNG2Q96CW9 530 aa13.84□□□□□ -0.19
CD9-210ENST00000543916 ANGPTL4Q9BY76 406 aa13.84□□□□□ -0.19
CD9-210ENST00000543916 PAIP1Q9H074 479 aaKnown RBP13.84□□□□□ -0.19
CD9-210ENST00000543916 SAR1AQ9NR31 198 aa13.84□□□□□ -0.19
CD9-210ENST00000543916 GIN1Q9NXP7 522 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms