RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 ARAFP10398 606 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 ZNF8P17098 575 aaPredicted RBP11.94□□□□□ -0.5
SMG8-202ENST00000543872 C4BPBP20851 252 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 ATP5A1P25705 553 aaKnown RBP11.94□□□□□ -0.5
SMG8-202ENST00000543872 CDH11P55287 796 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 ERVK-25P63136 954 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 OC90Q02509 493 aaPredicted RBP11.94□□□□□ -0.5
SMG8-202ENST00000543872 RAB40BQ12829 278 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 MMP21Q8N119 569 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 OR4K5Q8NGD3 323 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 TRMT10AQ8TBZ6 339 aaKnown RBP11.94□□□□□ -0.5
SMG8-202ENST00000543872 ASZ1Q8WWH4 475 aa11.94□□□□□ -0.5
SMG8-202ENST00000543872 SEPT5Q99719 369 aaPredicted RBP11.94□□□□□ -0.5
SMG8-202ENST00000543872 EXOSC1Q9Y3B2 195 aaKnown RBP11.94□□□□□ -0.5
SMG8-202ENST00000543872 A0A1W2PRB8 838 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 K7ERQ8 282 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 ARPC5O15511 151 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 PRODHO43272 600 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 FZD7O75084 574 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 SOX30O94993 753 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 SLC6A11P48066 632 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 EEF1A2Q05639 463 aaKnown RBP11.93□□□□□ -0.5
SMG8-202ENST00000543872 SP140Q13342 867 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 NUMA1Q14980 2115 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 METTL11BQ5VVY1 283 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 RNLSQ5VYX0 342 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 SLC25A25Q6KCM7 469 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 ZNF613Q6PF04 617 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 RFLNAQ6ZTI6 216 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 OVCH2Q7RTZ1 564 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 OAFQ86UD1 273 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 GPC2Q8N158 579 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 CNOT9Q92600 299 aaKnown RBP11.93□□□□□ -0.5
SMG8-202ENST00000543872 FNDC11Q9BVV2 318 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 GSDMCQ9BYG8 508 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 REEP4Q9H6H4 257 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 TRBV23-1A0A0A0MS06 115 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 G3V3Q6 166 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 WDPCPO95876 746 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 TGFB1P01137 390 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 WNT1P04628 370 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 DRD2P14416 443 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 PTNP21246 168 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 PSMA3P25788 255 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 HSD17B2P37059 387 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 PFN3P60673 137 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 MELKQ14680 651 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 CD200R1LQ6Q8B3 271 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 CD300LGQ6UXG3 332 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 TSPAN33Q86UF1 283 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 PAQR7Q86WK9 346 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 NXPE1Q8N323 547 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 ARIH2OSQ8N7S6 290 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 BOLLQ8N9W6 283 aaKnown RBP11.93□□□□□ -0.5
SMG8-202ENST00000543872 FBXO15Q8NCQ5 510 aaPredicted RBP11.93□□□□□ -0.5
SMG8-202ENST00000543872 OR4D10Q8NGI6 311 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 NANPQ8TBE9 248 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 GANCQ8TET4 914 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 FCRL4Q96PJ5 515 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 SLC12A9Q9BXP2 914 aa11.93□□□□□ -0.5
SMG8-202ENST00000543872 PRG3Q9Y2Y8 225 aaPredicted RBP11.93□□□□□ -0.5
SMG8-202ENST00000543872 H7C2Y5 167 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 DNASE2O00115 360 aaPredicted RBP11.92□□□□□ -0.5
SMG8-202ENST00000543872 PEPDP12955 493 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 SLC6A12P48065 614 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 VEGFCP49767 419 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 GAS1P54826 345 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 SIM1P81133 766 aaPredicted RBP11.92□□□□□ -0.5
SMG8-202ENST00000543872 ZNF792Q3KQV3 632 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 SPOUT1Q5T280 376 aaKnown RBP11.92□□□□□ -0.5
SMG8-202ENST00000543872 ARL9Q6T311 187 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 SERPINA13PQ6UXR4 307 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 SLC36A4Q6YBV0 504 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 MACC1Q6ZN28 852 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 THOC6Q86W42 341 aaKnown RBP11.92□□□□□ -0.5
SMG8-202ENST00000543872 KLHL36Q8N4N3 616 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 BVESQ8NE79 360 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 CHFRQ96EP1 664 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 LRRC46Q96FV0 321 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 PDXPQ96GD0 296 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 TMEM19Q96HH6 336 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 ARL6Q9H0F7 186 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 TMEM38AQ9H6F2 299 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 ACTR10Q9NZ32 417 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 SEC14L3Q9UDX4 400 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 AP1M2Q9Y6Q5 423 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 FABP1P07148 127 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 TIA1P31483 386 aaKnown RBP eCLIP11.92□□□□□ -0.5
SMG8-202ENST00000543872 TAS2R50P59544 299 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 DUSP4Q13115 394 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 SGCAQ16586 387 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 OR5M10Q6IEU7 315 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 SYT9Q86SS6 491 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 TEX47Q8TBZ9 253 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 SLC38A5Q8WUX1 472 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 ACOT12Q8WYK0 555 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 GCDHQ92947 438 aaPredicted RBP11.92□□□□□ -0.5
SMG8-202ENST00000543872 FCRL1Q96LA6 429 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 FUZQ9BT04 418 aa11.92□□□□□ -0.5
SMG8-202ENST00000543872 RSPO3Q9BXY4 272 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms