RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 RIMS3Q9UJD0 308 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 GJD2Q9UKL4 321 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 PCDHA9Q9Y5H5 950 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 GPR45Q9Y5Y3 372 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 B8ZZF3 427 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 M0QZQ0 153 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 CASC3O15234 703 aaKnown RBP12.44□□□□□ -0.42
TNC-212ENST00000542877 NDUFB2O95178 105 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 CDK1P06493 297 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 CDK4P11802 303 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 AKR1C4P17516 323 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 FBLP22087 321 aaKnown RBP12.44□□□□□ -0.42
TNC-212ENST00000542877 CYCSP99999 105 aaKnown RBP12.44□□□□□ -0.42
TNC-212ENST00000542877 NNATQ16517 81 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 PINK1Q9BXM7 581 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 SACM1LQ9NTJ5 587 aa12.44□□□□□ -0.42
TNC-212ENST00000542877 BAZ2AQ9UIF9 1905 aaKnown RBP12.43□□□□□ -0.42
TNC-212ENST00000542877 IGLON5A6NGN9 336 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 KLF8O95600 359 aaPredicted RBP12.43□□□□□ -0.42
TNC-212ENST00000542877 CCL5P13501 91 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 KCNJ5P48544 419 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 ZXDBP98169 803 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 FGFBP1Q14512 234 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 RAB30Q15771 203 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 IER5LQ5T953 404 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 GTPBP8Q8N3Z3 284 aaPredicted RBP12.43□□□□□ -0.42
TNC-212ENST00000542877 SLC7A13Q8TCU3 470 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 PFDN5Q99471 154 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 NTMT1Q9BV86 223 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 HEBP1Q9NRV9 189 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 MYH6P13533 1939 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 SDC1P18827 310 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 PRSS3P35030 304 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 CHPT1Q8WUD6 406 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 DEFB126Q9BYW3 111 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 CACNG2Q9Y698 323 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 TRIM64A6NGJ6 449 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 HMX3A6NHT5 357 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 WASH4PA8MWX3 477 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 H3BUI4 141 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 HRGP04196 525 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 SYN1P17600 705 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 DRD5P21918 477 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 CDK2P24941 298 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 HNRNPFP52597 415 aaKnown RBP12.43□□□□□ -0.42
TNC-212ENST00000542877 PRPS1P60891 318 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 RAB40BQ12829 278 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 MTFR2Q6P444 385 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 CPOQ8IVL8 374 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 COQ10AQ96MF6 247 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 MS4A4EQ96PG1 132 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 NAA11Q9BSU3 229 aaPredicted RBP12.43□□□□□ -0.42
TNC-212ENST00000542877 IL26Q9NPH9 171 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 THSD1Q9NS62 852 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 TREX1Q9NSU2 369 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 SLC26A5P58743 744 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 RPS26P11Q5JNZ5 115 aaPredicted RBP12.43□□□□□ -0.42
TNC-212ENST00000542877 HES5Q5TA89 166 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 CNTN4Q8IWV2 1026 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 B3GNT7Q8NFL0 401 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 OR5W2Q8NH69 310 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 ZFP90Q8TF47 636 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 WDR6Q9NNW5 1121 aaKnown RBP12.43□□□□□ -0.42
TNC-212ENST00000542877 KLF15Q9UIH9 416 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 EDARQ9UNE0 448 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 OR1A2Q9Y585 309 aa12.43□□□□□ -0.42
TNC-212ENST00000542877 TRAV18A0A075B6X5 111 aa12.42□□□□□ -0.42
TNC-212ENST00000542877 SSX5O60225 188 aa12.42□□□□□ -0.42
TNC-212ENST00000542877 RFPL3O75679 317 aa12.42□□□□□ -0.42
TNC-212ENST00000542877 SIM1P81133 766 aaPredicted RBP12.42□□□□□ -0.42
TNC-212ENST00000542877 MRPS10P82664 201 aaKnown RBP12.42□□□□□ -0.42
TNC-212ENST00000542877 ZNF616Q08AN1 781 aa12.42□□□□□ -0.42
TNC-212ENST00000542877 RTP2Q5QGT7 225 aa12.42□□□□□ -0.42
TNC-212ENST00000542877 OR4N5Q8IXE1 308 aa12.42□□□□□ -0.42
TNC-212ENST00000542877 OR6Q1Q8NGQ2 317 aa12.42□□□□□ -0.42
TNC-212ENST00000542877 ZNF649Q9BS31 505 aa12.42□□□□□ -0.42
TNC-212ENST00000542877 OR51E2Q9H255 320 aa12.42□□□□□ -0.42
TNC-212ENST00000542877 TEX10Q9NXF1 929 aaPredicted RBP12.42□□□□□ -0.42
TNC-212ENST00000542877 PCDHGA8Q9Y5G5 932 aa12.42□□□□□ -0.42
TNC-212ENST00000542877 VSTM2BA6NLU5 285 aa12.42□□□□□ -0.42
TNC-212ENST00000542877 GOSR2O14653 212 aa12.42□□□□□ -0.42
TNC-212ENST00000542877 PLATP00750 562 aa12.42□□□□□ -0.42
TNC-212ENST00000542877 DDCP20711 480 aa12.42□□□□□ -0.42
TNC-212ENST00000542877 CTXN1P60606 82 aa12.42□□□□□ -0.42
TNC-212ENST00000542877 PIN1Q13526 163 aaPredicted RBP12.42□□□□□ -0.42
TNC-212ENST00000542877 AADACL4Q5VUY2 407 aa12.42□□□□□ -0.42
TNC-212ENST00000542877 SLC35F2Q8IXU6 374 aa12.42□□□□□ -0.42
TNC-212ENST00000542877 ARFGAP1Q8N6T3 406 aa12.42□□□□□ -0.42
TNC-212ENST00000542877 ZSCAN1Q8NBB4 408 aa12.42□□□□□ -0.42
TNC-212ENST00000542877 OR5B12Q96R08 314 aa12.42□□□□□ -0.42
TNC-212ENST00000542877 PHB2Q99623 299 aa12.42□□□□□ -0.42
TNC-212ENST00000542877 C7orf50Q9BRJ6 194 aaKnown RBP12.42□□□□□ -0.42
TNC-212ENST00000542877 CD70P32970 193 aa12.42□□□□□ -0.42
TNC-212ENST00000542877 FAM69AQ5T7M9 428 aa12.42□□□□□ -0.42
TNC-212ENST00000542877 OR5L2Q8NGL0 311 aa12.42□□□□□ -0.42
TNC-212ENST00000542877 KCNS2Q9ULS6 477 aa12.42□□□□□ -0.42
TNC-212ENST00000542877 PPP1R3DO95685 299 aa12.42□□□□□ -0.42
TNC-212ENST00000542877 TFP02787 698 aa12.42□□□□□ -0.42
TNC-212ENST00000542877 ZNF35P13682 527 aa12.42□□□□□ -0.42
TNC-212ENST00000542877 GCAP28676 217 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms