RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 SAMD14Q8IZD0 417 aaPredicted RBP10.76□□□□□ -0.69
PTPN6-219ENST00000542848 MMP21Q8N119 569 aa10.76□□□□□ -0.69
PTPN6-219ENST00000542848 TMEM151AQ8N4L1 468 aa10.76□□□□□ -0.69
PTPN6-219ENST00000542848 C1orf52Q8N6N3 182 aaKnown RBP10.76□□□□□ -0.69
PTPN6-219ENST00000542848 GBP7Q8N8V2 638 aaPredicted RBP10.76□□□□□ -0.69
PTPN6-219ENST00000542848 WFDC11Q8NEX6 87 aa10.76□□□□□ -0.69
PTPN6-219ENST00000542848 RDH11Q8TC12 318 aa10.76□□□□□ -0.69
PTPN6-219ENST00000542848 TMBIM1Q969X1 311 aa10.76□□□□□ -0.69
PTPN6-219ENST00000542848 INTS12Q96CB8 462 aaKnown RBP10.76□□□□□ -0.69
PTPN6-219ENST00000542848 PGM2Q96G03 612 aa10.76□□□□□ -0.69
PTPN6-219ENST00000542848 BTBD9Q96Q07 612 aa10.76□□□□□ -0.69
PTPN6-219ENST00000542848 G6PC3Q9BUM1 346 aa10.76□□□□□ -0.69
PTPN6-219ENST00000542848 MRPL46Q9H2W6 279 aaKnown RBP10.76□□□□□ -0.69
PTPN6-219ENST00000542848 BEX4Q9NWD9 120 aaPredicted RBP10.76□□□□□ -0.69
PTPN6-219ENST00000542848 FAM53CQ9NYF3 392 aa10.76□□□□□ -0.69
PTPN6-219ENST00000542848 EHD3Q9NZN3 535 aa10.76□□□□□ -0.69
PTPN6-219ENST00000542848 CLCF1Q9UBD9 225 aa10.76□□□□□ -0.69
PTPN6-219ENST00000542848 HEY2Q9UBP5 337 aa10.76□□□□□ -0.69
PTPN6-219ENST00000542848 VPS29Q9UBQ0 182 aa10.76□□□□□ -0.69
PTPN6-219ENST00000542848 NDRG3Q9UGV2 375 aa10.76□□□□□ -0.69
PTPN6-219ENST00000542848 TRPS1Q9UHF7 1281 aa10.76□□□□□ -0.69
PTPN6-219ENST00000542848 MCM8Q9UJA3 840 aa10.76□□□□□ -0.69
PTPN6-219ENST00000542848 ZNF225Q9UK10 706 aa10.76□□□□□ -0.69
PTPN6-219ENST00000542848 UTS2RQ9UKP6 389 aa10.76□□□□□ -0.69
PTPN6-219ENST00000542848 WIF1Q9Y5W5 379 aa10.76□□□□□ -0.69
PTPN6-219ENST00000542848 EXOC1LA0A1B0GW35 172 aa10.75□□□□□ -0.69
PTPN6-219ENST00000542848 PLOD2O00469 737 aa10.75□□□□□ -0.69
PTPN6-219ENST00000542848 TSPAN2O60636 221 aa10.75□□□□□ -0.69
PTPN6-219ENST00000542848 KRT6AP02538 564 aa10.75□□□□□ -0.69
PTPN6-219ENST00000542848 KRT6BP04259 564 aa10.75□□□□□ -0.69
PTPN6-219ENST00000542848 CRHP06850 196 aa10.75□□□□□ -0.69
PTPN6-219ENST00000542848 CT45A8P0DMV1 189 aa10.75□□□□□ -0.69
PTPN6-219ENST00000542848 CT45A9P0DMV2 189 aa10.75□□□□□ -0.69
PTPN6-219ENST00000542848 ZNF708P17019 499 aa10.75□□□□□ -0.69
PTPN6-219ENST00000542848 CD53P19397 219 aa10.75□□□□□ -0.69
PTPN6-219ENST00000542848 KRT6CP48668 564 aa10.75□□□□□ -0.69
PTPN6-219ENST00000542848 PNLIPRP2P54317 469 aa10.75□□□□□ -0.69
PTPN6-219ENST00000542848 CDH13P55290 713 aa10.75□□□□□ -0.69
PTPN6-219ENST00000542848 CLDN18P56856 261 aa10.75□□□□□ -0.69
PTPN6-219ENST00000542848 LTB4RQ15722 352 aa10.75□□□□□ -0.69
PTPN6-219ENST00000542848 CT45A2Q5DJT8 189 aa10.75□□□□□ -0.69
PTPN6-219ENST00000542848 ZNF628Q5EBL2 1059 aa10.75□□□□□ -0.69
PTPN6-219ENST00000542848 UBAP2Q5T6F2 1119 aaKnown RBP10.75□□□□□ -0.69
PTPN6-219ENST00000542848 AGBL2Q5U5Z8 902 aa10.75□□□□□ -0.69
PTPN6-219ENST00000542848 FAM180BQ6P0A1 224 aa10.75□□□□□ -0.69
PTPN6-219ENST00000542848 RPS27LQ71UM5 84 aaKnown RBP10.75□□□□□ -0.69
PTPN6-219ENST00000542848 CCDC116Q8IYX3 515 aa10.75□□□□□ -0.69
PTPN6-219ENST00000542848 RNF138Q8WVD3 245 aa10.75□□□□□ -0.69
PTPN6-219ENST00000542848 C18orf12Q96KH6 178 aa10.75□□□□□ -0.69
PTPN6-219ENST00000542848 ADOQ96SZ5 270 aa10.75□□□□□ -0.69
PTPN6-219ENST00000542848 PAFAH2Q99487 392 aa10.75□□□□□ -0.69
PTPN6-219ENST00000542848 ZNF180Q9UJW8 692 aa10.75□□□□□ -0.69
PTPN6-219ENST00000542848 FBXL2Q9UKC9 423 aa10.75□□□□□ -0.69
PTPN6-219ENST00000542848 PACSIN3Q9UKS6 424 aa10.75□□□□□ -0.69
PTPN6-219ENST00000542848 DLGAP4Q9Y2H0 992 aa10.75□□□□□ -0.69
PTPN6-219ENST00000542848 ROS1P08922 2347 aa10.75□□□□□ -0.69
PTPN6-219ENST00000542848 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.74□□□□□ -0.69
PTPN6-219ENST00000542848 A8MT66 165 aa10.74□□□□□ -0.69
PTPN6-219ENST00000542848 MANBAO00462 879 aa10.74□□□□□ -0.69
PTPN6-219ENST00000542848 MSTNO14793 375 aa10.74□□□□□ -0.69
PTPN6-219ENST00000542848 RGS16O15492 202 aaPredicted RBP10.74□□□□□ -0.69
PTPN6-219ENST00000542848 HCRTR2O43614 444 aa10.74□□□□□ -0.69
PTPN6-219ENST00000542848 ZIC3O60481 467 aa10.74□□□□□ -0.69
PTPN6-219ENST00000542848 ULK1O75385 1050 aa10.74□□□□□ -0.69
PTPN6-219ENST00000542848 TNFSF13O75888 250 aa10.74□□□□□ -0.69
PTPN6-219ENST00000542848 OR4F21O95013 312 aa10.74□□□□□ -0.69
PTPN6-219ENST00000542848 ESRRBO95718 433 aa10.74□□□□□ -0.69
PTPN6-219ENST00000542848 SBK3P0C264 359 aa10.74□□□□□ -0.69
PTPN6-219ENST00000542848 TSPAN8P19075 237 aa10.74□□□□□ -0.69
PTPN6-219ENST00000542848 KRT20P35900 424 aa10.74□□□□□ -0.69
PTPN6-219ENST00000542848 MRPS22P82650 360 aaKnown RBP10.74□□□□□ -0.69
PTPN6-219ENST00000542848 CLCQ05315 142 aa10.74□□□□□ -0.69
PTPN6-219ENST00000542848 CSTF3Q12996 717 aaKnown RBP10.74□□□□□ -0.69
PTPN6-219ENST00000542848 HEPACAMQ14CZ8 416 aa10.74□□□□□ -0.69
PTPN6-219ENST00000542848 SHEQ5VZ18 495 aa10.74□□□□□ -0.69
PTPN6-219ENST00000542848 OR2A2Q6IF42 318 aa10.74□□□□□ -0.69
PTPN6-219ENST00000542848 LARP4Q71RC2 724 aaKnown RBP eCLIP10.74□□□□□ -0.69
PTPN6-219ENST00000542848 GRAMD2AQ8IUY3 354 aa10.74□□□□□ -0.69
PTPN6-219ENST00000542848 GCNT2Q8N0V5 402 aa10.74□□□□□ -0.69
PTPN6-219ENST00000542848 DCAKDQ8WVC6 231 aa10.74□□□□□ -0.69
PTPN6-219ENST00000542848 ATP6V1G3Q96LB4 118 aa10.74□□□□□ -0.69
PTPN6-219ENST00000542848 VSTM2LQ96N03 204 aa10.74□□□□□ -0.69
PTPN6-219ENST00000542848 SFXN2Q96NB2 322 aa10.74□□□□□ -0.69
PTPN6-219ENST00000542848 TMBIM4Q9HC24 238 aa10.74□□□□□ -0.69
PTPN6-219ENST00000542848 PFDN4Q9NQP4 134 aa10.74□□□□□ -0.69
PTPN6-219ENST00000542848 SENP1Q9P0U3 644 aa10.74□□□□□ -0.69
PTPN6-219ENST00000542848 LGALS13Q9UHV8 139 aa10.74□□□□□ -0.69
PTPN6-219ENST00000542848 DKKL1Q9UK85 242 aa10.74□□□□□ -0.69
PTPN6-219ENST00000542848 EIF3LQ9Y262 564 aaKnown RBP10.74□□□□□ -0.69
PTPN6-219ENST00000542848 TESMINQ9Y4I5 508 aa10.74□□□□□ -0.69
PTPN6-219ENST00000542848 TLN2Q9Y4G6 2542 aa10.74□□□□□ -0.69
PTPN6-219ENST00000542848 ZANQ9Y493 2812 aa10.73□□□□□ -0.69
PTPN6-219ENST00000542848 A0A1W2PNV4 684 aa10.73□□□□□ -0.69
PTPN6-219ENST00000542848 A0A1W2PPR1 153 aa10.73□□□□□ -0.69
PTPN6-219ENST00000542848 TRIM49D1C9J1S8 452 aa10.73□□□□□ -0.69
PTPN6-219ENST00000542848 PLOD3O60568 738 aa10.73□□□□□ -0.69
PTPN6-219ENST00000542848 TGM6O95932 706 aa10.73□□□□□ -0.69
PTPN6-219ENST00000542848 IL3P08700 152 aa10.73□□□□□ -0.69
PTPN6-219ENST00000542848 PEPDP12955 493 aa10.73□□□□□ -0.69
PTPN6-219ENST00000542848 GRK2P25098 689 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms