RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 DPH1Q9BZG8 443 aa25.82■■□□□ 1.72
CCM2-218ENST00000541586 VN1R1Q9GZP7 353 aa25.82■■□□□ 1.72
CCM2-218ENST00000541586 LRRC42Q9Y546 428 aa25.82■■□□□ 1.72
CCM2-218ENST00000541586 APC2O95996 2303 aa25.81■■□□□ 1.72
CCM2-218ENST00000541586 DMXL2Q8TDJ6 3036 aa25.81■■□□□ 1.72
CCM2-218ENST00000541586 IFNA16P05015 189 aa25.81■■□□□ 1.72
CCM2-218ENST00000541586 ACP2P11117 423 aa25.81■■□□□ 1.72
CCM2-218ENST00000541586 EIF2S3P41091 472 aaKnown RBP25.81■■□□□ 1.72
CCM2-218ENST00000541586 DUSP8Q13202 625 aa25.81■■□□□ 1.72
CCM2-218ENST00000541586 GNA13Q14344 377 aa25.81■■□□□ 1.72
CCM2-218ENST00000541586 EXOSC6Q5RKV6 272 aaKnown RBP25.81■■□□□ 1.72
CCM2-218ENST00000541586 ATAD3BQ5T9A4 648 aa25.81■■□□□ 1.72
CCM2-218ENST00000541586 OLIG3Q7RTU3 272 aa25.81■■□□□ 1.72
CCM2-218ENST00000541586 SMYD1Q8NB12 490 aa25.81■■□□□ 1.72
CCM2-218ENST00000541586 OR52R1Q8NGF1 315 aa25.81■■□□□ 1.72
CCM2-218ENST00000541586 DNAJC9Q8WXX5 260 aa25.81■■□□□ 1.72
CCM2-218ENST00000541586 LZICQ8WZA0 190 aa25.81■■□□□ 1.72
CCM2-218ENST00000541586 ZNF184Q99676 751 aaPredicted RBP25.81■■□□□ 1.72
CCM2-218ENST00000541586 PELOQ9BRX2 385 aaKnown RBP25.81■■□□□ 1.72
CCM2-218ENST00000541586 BDH2Q9BUT1 245 aa25.81■■□□□ 1.72
CCM2-218ENST00000541586 ACACAQ13085 2346 aa25.81■■□□□ 1.72
CCM2-218ENST00000541586 URB1O60287 2271 aaKnown RBP25.81■■□□□ 1.72
CCM2-218ENST00000541586 IGKV3D-11A0A0A0MRZ8 115 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 SAC3D1A6NKF1 404 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 HRKO00198 91 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 RRP8O43159 456 aaKnown RBP25.8■■□□□ 1.72
CCM2-218ENST00000541586 PDE9AO76083 593 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 CST1P01037 141 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 EFNA3P52797 238 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 RHAGQ02094 409 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 DUSP5Q16690 384 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 GPAT3Q53EU6 434 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 CDS1Q92903 461 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 TSLPQ969D9 159 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 ZNF607Q96SK3 696 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 NTN4Q9HB63 628 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 BCL2L10Q9HD36 194 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 GIN1Q9NXP7 522 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 LIPT1Q9Y234 373 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 NUP210LQ5VU65 1888 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 PRSS23O95084 383 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 MFN2O95140 757 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 AGR2O95994 175 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 FABP3P05413 133 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 UMODP07911 640 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 GALNSP34059 522 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 VLDLRP98155 873 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 ZNF267Q14586 743 aaPredicted RBP25.8■■□□□ 1.72
CCM2-218ENST00000541586 HEPHL1Q6MZM0 1159 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 ZCCHC12Q6PEW1 402 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 C16orf62Q7Z3J2 963 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 EPHX4Q8IUS5 362 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 CDRT4Q8N9R6 151 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 BBS10Q8TAM1 723 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 ZCCHC14Q8WYQ9 949 aaKnown RBP25.8■■□□□ 1.72
CCM2-218ENST00000541586 VPS50Q96JG6 964 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 COQ10BQ9H8M1 238 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 EXD2Q9NVH0 621 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 DNAJB9Q9UBS3 223 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 PCDHGA6Q9Y5G7 932 aa25.8■■□□□ 1.72
CCM2-218ENST00000541586 COQ9O75208 318 aa25.79■■□□□ 1.72
CCM2-218ENST00000541586 H6PDO95479 791 aa25.79■■□□□ 1.72
CCM2-218ENST00000541586 OTX2P32243 289 aa25.79■■□□□ 1.72
CCM2-218ENST00000541586 NSDHLQ15738 373 aa25.79■■□□□ 1.72
CCM2-218ENST00000541586 PRAMEF8Q5VWM4 474 aa25.79■■□□□ 1.72
CCM2-218ENST00000541586 PRAMEF7Q5VXH5 474 aa25.79■■□□□ 1.72
CCM2-218ENST00000541586 C7orf34Q96L11 122 aa25.79■■□□□ 1.72
CCM2-218ENST00000541586 COL21A1Q96P44 957 aa25.79■■□□□ 1.72
CCM2-218ENST00000541586 TRNT1Q96Q11 434 aaKnown RBP25.79■■□□□ 1.72
CCM2-218ENST00000541586 CCNL2Q96S94 520 aaPredicted RBP25.79■■□□□ 1.72
CCM2-218ENST00000541586 PIGUQ9H490 435 aa25.79■■□□□ 1.72
CCM2-218ENST00000541586 OAZ3Q9UMX2 235 aa25.79■■□□□ 1.72
CCM2-218ENST00000541586 ABCG2Q9UNQ0 655 aa25.79■■□□□ 1.72
CCM2-218ENST00000541586 GPC6Q9Y625 555 aaPredicted RBP25.79■■□□□ 1.72
CCM2-218ENST00000541586 hCG_2039718K7EN88 272 aa25.78■■□□□ 1.72
CCM2-218ENST00000541586 RECKO95980 971 aa25.78■■□□□ 1.72
CCM2-218ENST00000541586 ZNF26P17031 533 aaPredicted RBP25.78■■□□□ 1.72
CCM2-218ENST00000541586 SSTR4P31391 388 aa25.78■■□□□ 1.72
CCM2-218ENST00000541586 PGDP52209 483 aa25.78■■□□□ 1.72
CCM2-218ENST00000541586 AQP4P55087 323 aa25.78■■□□□ 1.72
CCM2-218ENST00000541586 SPACA3Q8IXA5 215 aa25.78■■□□□ 1.72
CCM2-218ENST00000541586 METTL21AQ8WXB1 218 aa25.78■■□□□ 1.72
CCM2-218ENST00000541586 A0A0G2JPF8 293 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 A8MVJ9 347 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 HNRNPCL2B2RXH8 293 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 HNRNPCL3B7ZW38 293 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 ALOX5P09917 674 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 HNRNPCL4P0DMR1 293 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 TNNI3P19429 210 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 TNFRSF1BP20333 461 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 MAP3K8P41279 467 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 SSPNQ14714 243 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 DUSP7Q16829 419 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 CYP27C1Q4G0S4 372 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 IFI44LQ53G44 452 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 LRRC69Q6ZNQ3 347 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 KRT73Q86Y46 540 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 ARMC8Q8IUR7 673 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 GALNT4Q8N4A0 578 aa25.77■■□□□ 1.72
CCM2-218ENST00000541586 SPPL2AQ8TCT8 520 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms