RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 USE1Q9NZ43 259 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 PTGFRNQ9P2B2 879 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 P2RX2Q9UBL9 471 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 ZNF639Q9UID6 485 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 CDC14AQ9UNH5 594 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 PLCL2Q9UPR0 1127 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 ASB4Q9Y574 426 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 SNX8Q9Y5X2 465 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 HYKKA2RU49 373 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 TLCD2A6NGC4 264 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 RNF212BA8MTL3 300 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 A8MVJ9 347 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 CLDN4O14493 209 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 TOX3O15405 576 aaPredicted RBP7.8□□□□□ -1.16
CHD4-208ENST00000540960 TMPRSS11DO60235 418 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 TNFRSF21O75509 655 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 AK1P00568 194 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 GBAP04062 536 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 SMIM10L1P0DMW3 83 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 ARAFP10398 606 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 MAGP20916 626 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 PEBP1P30086 187 aaKnown RBP7.8□□□□□ -1.16
CHD4-208ENST00000540960 CAPZBP47756 277 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 ARL4DP49703 201 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 NCBP2P52298 156 aaKnown RBP eCLIP7.8□□□□□ -1.16
CHD4-208ENST00000540960 AQP4P55087 323 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 SELENOWP63302 87 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 TNFRSF17Q02223 184 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 IL10RAQ13651 578 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 DAG1Q14118 895 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 FAM53BQ14153 422 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 CEBPEQ15744 281 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 FAM214AQ32MH5 1076 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 GTDC1Q4AE62 458 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 LRRC23Q53EV4 343 aaPredicted RBP7.8□□□□□ -1.16
CHD4-208ENST00000540960 CYBRD1Q53TN4 286 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 SFT2D3Q587I9 215 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 OR2T5Q6IEZ7 315 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 ADNP2Q6IQ32 1131 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 ANKRD26P1Q6NSI1 321 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 SHQ1Q6PI26 577 aaKnown RBP7.8□□□□□ -1.16
CHD4-208ENST00000540960 C6orf15Q6UXA7 325 aaPredicted RBP7.8□□□□□ -1.16
CHD4-208ENST00000540960 RNF111Q6ZNA4 994 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 C6orf120Q7Z4R8 191 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 UBE3DQ7Z6J8 389 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 AMIGO2Q86SJ2 522 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 C17orf82Q86X59 251 aaPredicted RBP7.8□□□□□ -1.16
CHD4-208ENST00000540960 ZDHHC21Q8IVQ6 265 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 LRRC25Q8N386 305 aaPredicted RBP7.8□□□□□ -1.16
CHD4-208ENST00000540960 GALNT4Q8N4A0 578 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 CBR4Q8N4T8 237 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 ZNF808Q8N4W9 903 aaPredicted RBP7.8□□□□□ -1.16
CHD4-208ENST00000540960 LINC00471Q8N535 108 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 SETD9Q8NE22 299 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 OR2T29Q8NH02 315 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 BBS10Q8TAM1 723 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 MIPOL1Q8TD10 442 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 UTP15Q8TED0 518 aaKnown RBP7.8□□□□□ -1.16
CHD4-208ENST00000540960 PROX1Q92786 737 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 EXOSC8Q96B26 276 aaKnown RBP7.8□□□□□ -1.16
CHD4-208ENST00000540960 SMIM10Q96HG1 83 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 AHCYL2Q96HN2 611 aaKnown RBP7.8□□□□□ -1.16
CHD4-208ENST00000540960 AMDHD1Q96NU7 426 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 CIB1Q99828 191 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 BTBD2Q9BX70 525 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 ANKRD60Q9BZ19 345 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 FAM192AQ9GZU8 254 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 ARMC7Q9H6L4 198 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 AKIRIN1Q9H9L7 192 aaPredicted RBP7.8□□□□□ -1.16
CHD4-208ENST00000540960 PDE7BQ9NP56 450 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 FBXO8Q9NRD0 319 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 PNPLA3Q9NST1 481 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 SLC13A4Q9UKG4 626 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 BLOC1S6Q9UL45 172 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 EXO1Q9UQ84 846 aaKnown RBP7.8□□□□□ -1.16
CHD4-208ENST00000540960 PADI2Q9Y2J8 665 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 PCDHGA6Q9Y5G7 932 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 PCDHGA10Q9Y5H3 936 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 AP4B1Q9Y6B7 739 aa7.8□□□□□ -1.16
CHD4-208ENST00000540960 NCOA6Q14686 2063 aaPredicted RBP7.8□□□□□ -1.16
CHD4-208ENST00000540960 TRBV23OR9-2A0A075B6M9 112 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 A0A087WV62 115 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 IGHV1OR21-1A0A087WYE8 117 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 A0A0G2JPF8 293 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 A0A0J9YVX5 310 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 A0A1W2PR48 441 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 HNRNPCL2B2RXH8 293 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 HNRNPCL3B7ZW38 293 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 H0YGG7 62 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 RTCAO00442 366 aaKnown RBP7.79□□□□□ -1.16
CHD4-208ENST00000540960 PLOD2O00469 737 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 PPM1DO15297 605 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 DYRK3O43781 588 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 TPST1O60507 370 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 UGT2B11O75310 529 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 ZBTB11O95625 1053 aaPredicted RBP7.79□□□□□ -1.16
CHD4-208ENST00000540960 EML2O95834 649 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 TBX6O95947 436 aaPredicted RBP7.79□□□□□ -1.16
CHD4-208ENST00000540960 RECKO95980 971 aa7.79□□□□□ -1.16
CHD4-208ENST00000540960 IFNW1P05000 195 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms