RNA–Protein interactions for RNA: ENST00000540447.5

YBX3-208, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 6,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-208ENST00000540447 C19orf57Q0VDD7 668 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 ENPP2Q13822 863 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 IQCJQ1A5X6 159 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 SLC27A1Q6PCB7 646 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 HFE2Q6ZVN8 426 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 C2orf73Q8N5S3 287 aaPredicted RBP8.33□□□□□ -1.08
YBX3-208ENST00000540447 IL17RDQ8NFM7 739 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 OR5W2Q8NH69 310 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 NTAN1Q96AB6 310 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 ZDHHC11Q9H8X9 412 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 OSER1Q9NX31 292 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 FBXW2Q9UKT8 454 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 FZD10Q9ULW2 581 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 MYH8P13535 1937 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 SETD1BQ9UPS6 1966 aaKnown RBP8.33□□□□□ -1.08
YBX3-208ENST00000540447 MEIS3P1A6NDR6 274 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 ANGPTL7O43827 346 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 C6orf47O95873 294 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 KNG1P01042 644 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 GPR176Q14439 515 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 CEP68Q76N32 757 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 TMCO2Q7Z6W1 182 aaPredicted RBP8.33□□□□□ -1.08
YBX3-208ENST00000540447 KRTCAP2Q8N6L1 136 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 THAP4Q8WY91 577 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 SEC22AQ96IW7 307 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 UROC1Q96N76 676 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 EPYCQ99645 322 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 SPG21Q9NZD8 308 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 ACAD8Q9UKU7 415 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 WASH4PA8MWX3 477 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 UMAD1C9J7I0 102 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 NTSR2O95665 410 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 TGM1P22735 817 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 GDNFP39905 211 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 RBP2P50120 134 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 CD300CQ08708 224 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 MEF2DQ14814 521 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 MOGAT2Q3SYC2 334 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 HHIPL2Q6UWX4 724 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 ADGRF3Q8IZF5 1079 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 KLHDC1Q8N7A1 406 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 ZDHHC15Q96MV8 337 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 HSD17B14Q9BPX1 270 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 DERL2Q9GZP9 239 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 SLC32A1Q9H598 525 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 C17orf113A0A1B0GUU1 675 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 M0QZK8 103 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 P2RX6O15547 441 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 CYB5BO43169 146 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 HOXA2O43364 376 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 TCF21O43680 179 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 GGCTO75223 188 aaKnown RBP8.33□□□□□ -1.08
YBX3-208ENST00000540447 HBE1P02100 147 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 RPLP1P05386 114 aaKnown RBP8.33□□□□□ -1.08
YBX3-208ENST00000540447 MGST1P10620 155 aaKnown RBP8.33□□□□□ -1.08
YBX3-208ENST00000540447 F3P13726 295 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 CXCR1P25024 350 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 DSC1Q08554 894 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 IRF5Q13568 498 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 DPYSL2Q16555 572 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 C4orf17Q53FE4 359 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 WSCD1Q658N2 575 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 SIAH3Q8IW03 269 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 NLGN1Q8N2Q7 840 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 KCNRGQ8N5I3 272 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 OR52E4Q8NGH9 312 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 BRI3BPQ8WY22 251 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 KIAA1191Q96A73 305 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 ATG4CQ96DT6 458 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 CMKLR1Q99788 373 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 COLEC11Q9BWP8 271 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 ACTL8Q9H568 366 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 PLEKHA3Q9HB20 300 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 ABRACLQ9P1F3 81 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 POLLQ9UGP5 575 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 FKBPLQ9UIM3 349 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 GOLT1BQ9Y3E0 138 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 RAI2Q9Y5P3 530 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 ADAMTS12P58397 1594 aa8.33□□□□□ -1.08
YBX3-208ENST00000540447 A0A0A6YYJ9 748 aa8.32□□□□□ -1.08
YBX3-208ENST00000540447 SLC22A23A1A5C7 686 aa8.32□□□□□ -1.08
YBX3-208ENST00000540447 DCTN6O00399 190 aa8.32□□□□□ -1.08
YBX3-208ENST00000540447 STK17BO94768 372 aa8.32□□□□□ -1.08
YBX3-208ENST00000540447 CPNE6O95741 557 aa8.32□□□□□ -1.08
YBX3-208ENST00000540447 CBX7O95931 251 aa8.32□□□□□ -1.08
YBX3-208ENST00000540447 PDYNP01213 254 aa8.32□□□□□ -1.08
YBX3-208ENST00000540447 ADRB3P13945 408 aa8.32□□□□□ -1.08
YBX3-208ENST00000540447 L1CAMP32004 1257 aa8.32□□□□□ -1.08
YBX3-208ENST00000540447 MAP2K5Q13163 448 aa8.32□□□□□ -1.08
YBX3-208ENST00000540447 PHYHD1Q5SRE7 291 aa8.32□□□□□ -1.08
YBX3-208ENST00000540447 SGPP2Q8IWX5 399 aa8.32□□□□□ -1.08
YBX3-208ENST00000540447 GPC2Q8N158 579 aa8.32□□□□□ -1.08
YBX3-208ENST00000540447 RELL2Q8NC24 303 aaPredicted RBP8.32□□□□□ -1.08
YBX3-208ENST00000540447 SFT2D1Q8WV19 159 aa8.32□□□□□ -1.08
YBX3-208ENST00000540447 TANKQ92844 425 aa8.32□□□□□ -1.08
YBX3-208ENST00000540447 IMP4Q96G21 291 aaKnown RBP8.32□□□□□ -1.08
YBX3-208ENST00000540447 SCMH1Q96GD3 660 aa8.32□□□□□ -1.08
YBX3-208ENST00000540447 SPACA7Q96KW9 195 aa8.32□□□□□ -1.08
YBX3-208ENST00000540447 URM1Q9BTM9 101 aaKnown RBP8.32□□□□□ -1.08
YBX3-208ENST00000540447 ZNF385DQ9H6B1 395 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms