RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 DAPP51397 102 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 CDK3Q00526 305 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 DPTQ07507 201 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 EIPR1Q53HC9 387 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 TMEM107Q6UX40 140 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 ARMC10Q8N2F6 343 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 LSM14AQ8ND56 463 aaKnown RBP9.43□□□□□ -0.9
TRAF1-202ENST00000540010 OR2L2Q8NH16 312 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 AKAP1Q92667 903 aaKnown RBP eCLIP9.43□□□□□ -0.9
TRAF1-202ENST00000540010 NEIL2Q969S2 332 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 EFHD2Q96C19 240 aaPredicted RBP9.43□□□□□ -0.9
TRAF1-202ENST00000540010 CACNG6Q9BXT2 260 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 CENPMQ9NSP4 180 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 ABCD2Q9UBJ2 740 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 GPR34Q9UPC5 381 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 A0A1W2PQ09 198 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 M0R233 179 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 AQP9O43315 295 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 GGT2P36268 569 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 CAV3P56539 151 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 PPP3R1P63098 170 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 SLAMF1Q13291 335 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 PUM1Q14671 1186 aaKnown RBP eCLIP9.43□□□□□ -0.9
TRAF1-202ENST00000540010 ADPRMQ3LIE5 342 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 LRRC37A5PQ49AS3 106 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 PIP5KL1Q5T9C9 394 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 SFRP4Q6FHJ7 346 aaPredicted RBP9.43□□□□□ -0.9
TRAF1-202ENST00000540010 MTFR2Q6P444 385 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 TTLQ8NG68 377 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 OR8K5Q8NH50 307 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 C16orf78Q8WTQ4 265 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 THEM6Q8WUY1 208 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 SLC6A15Q9H2J7 730 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 CLMPQ9H6B4 373 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 CHD7Q9P2D1 2997 aa9.43□□□□□ -0.9
TRAF1-202ENST00000540010 LOC105369274A0A096LPK9 316 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 A0A1W2PQU0 124 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 FLRT2O43155 660 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 SPINT1O43278 529 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 KLF8O95600 359 aaPredicted RBP9.42□□□□□ -0.9
TRAF1-202ENST00000540010 ASGR2P07307 311 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 VAMP1P23763 118 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 NTSR1P30989 418 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 HOXC5Q00444 222 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 NTRK2Q16620 822 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 SOWAHCQ53LP3 525 aaPredicted RBP9.42□□□□□ -0.9
TRAF1-202ENST00000540010 BCL2L15Q5TBC7 163 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 STEAP3Q658P3 488 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 PLAG1Q6DJT9 500 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 SAMD14Q8IZD0 417 aaPredicted RBP9.42□□□□□ -0.9
TRAF1-202ENST00000540010 OR4N4Q8N0Y3 316 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 NATD1Q8N6N6 113 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 ACBD7Q8N6N7 88 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 PROKR2Q8NFJ6 384 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 OR2T33Q8NG76 320 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 OR5AR1Q8NGP9 310 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 GGHQ92820 318 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 FAM46AQ96IP4 442 aaKnown RBP9.42□□□□□ -0.9
TRAF1-202ENST00000540010 EXOSC1Q9Y3B2 195 aaKnown RBP9.42□□□□□ -0.9
TRAF1-202ENST00000540010 MEIOCA2RUB1 952 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 OR14I1A6ND48 311 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 KMOO15229 486 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 UGDHO60701 494 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 B4GALT2O60909 372 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 ZNF432O94892 652 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 OSMP13725 252 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 HSD3B1P14060 373 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 HSD3B2P26439 372 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 CEBPGP53567 150 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 VEZF1Q14119 521 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 SLC5A12Q1EHB4 618 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 DEFB134Q4QY38 66 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 GRHL2Q6ISB3 625 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 SERPINA11Q86U17 422 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 FAM83FQ8NEG4 500 aaPredicted RBP9.42□□□□□ -0.9
TRAF1-202ENST00000540010 OR5D16Q8NGK9 328 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 OR8S1Q8NH09 359 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 MACROD1Q9BQ69 325 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 CENPOQ9BU64 300 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 ACTL8Q9H568 366 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 NLGN3Q9NZ94 848 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 ANKMY1Q9P2S6 941 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 CORINQ9Y5Q5 1042 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 CSNK1G3Q9Y6M4 447 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 C5orf51A6NDU8 294 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 MEN1O00255 615 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 FMO6PO60774 539 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 SOX30O94993 753 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 CDK1P06493 297 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 GIMD1P0DJR0 217 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 LCN1P31025 176 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 IDUAP35475 653 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 MAGEA2P43356 314 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 RPS21P63220 83 aaKnown RBP9.42□□□□□ -0.9
TRAF1-202ENST00000540010 HBA1P69905 142 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 FOXRED2Q8IWF2 684 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 GPR135Q8IZ08 494 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 YIPF7Q8N8F6 280 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 CYB561A3Q8NBI2 242 aa9.42□□□□□ -0.9
TRAF1-202ENST00000540010 COQ8AQ8NI60 647 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms