RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 E9PQ18 207 aa20.9■□□□□ 0.94
HOMER3-204ENST00000539827 AGRPO00253 132 aa20.9■□□□□ 0.94
HOMER3-204ENST00000539827 SYT5O00445 386 aa20.9■□□□□ 0.94
HOMER3-204ENST00000539827 UGT2B17O75795 530 aa20.9■□□□□ 0.94
HOMER3-204ENST00000539827 SSTR4P31391 388 aa20.9■□□□□ 0.94
HOMER3-204ENST00000539827 ALDH3B2P48448 385 aa20.9■□□□□ 0.94
HOMER3-204ENST00000539827 ZNF267Q14586 743 aaPredicted RBP20.9■□□□□ 0.94
HOMER3-204ENST00000539827 DHRS4L2Q6PKH6 230 aa20.9■□□□□ 0.94
HOMER3-204ENST00000539827 EID2Q8N6I1 236 aa20.9■□□□□ 0.94
HOMER3-204ENST00000539827 SGCDQ92629 289 aa20.9■□□□□ 0.94
HOMER3-204ENST00000539827 STACQ99469 402 aa20.9■□□□□ 0.94
HOMER3-204ENST00000539827 PITX2Q99697 317 aa20.9■□□□□ 0.94
HOMER3-204ENST00000539827 APOL4Q9BPW4 351 aa20.9■□□□□ 0.94
HOMER3-204ENST00000539827 TRIM45Q9H8W5 580 aaPredicted RBP20.9■□□□□ 0.94
HOMER3-204ENST00000539827 DUSP22Q9NRW4 184 aa20.9■□□□□ 0.94
HOMER3-204ENST00000539827 NPIPA5A0A0B4J1W7 369 aa20.9■□□□□ 0.94
HOMER3-204ENST00000539827 CENPVL1A0A0U1RR11 272 aa20.9■□□□□ 0.94
HOMER3-204ENST00000539827 TMEM221A6NGB7 291 aa20.9■□□□□ 0.94
HOMER3-204ENST00000539827 CLDN24A6NM45 220 aa20.9■□□□□ 0.94
HOMER3-204ENST00000539827 NPIPA7E9PJI5 369 aa20.9■□□□□ 0.94
HOMER3-204ENST00000539827 M0R296 226 aa20.9■□□□□ 0.94
HOMER3-204ENST00000539827 COQ9O75208 318 aa20.9■□□□□ 0.94
HOMER3-204ENST00000539827 NPIPA8P0DM63 369 aa20.9■□□□□ 0.94
HOMER3-204ENST00000539827 CRHBPP24387 322 aa20.9■□□□□ 0.94
HOMER3-204ENST00000539827 PRKAR1BP31321 381 aa20.9■□□□□ 0.94
HOMER3-204ENST00000539827 MAP3K8P41279 467 aa20.9■□□□□ 0.94
HOMER3-204ENST00000539827 ZNF770Q6IQ21 691 aaPredicted RBP20.9■□□□□ 0.94
HOMER3-204ENST00000539827 RBM44Q6ZP01 1051 aaKnown RBP20.9■□□□□ 0.94
HOMER3-204ENST00000539827 CCDC71Q8IV32 467 aaPredicted RBP20.9■□□□□ 0.94
HOMER3-204ENST00000539827 PEX5LQ8IYB4 626 aa20.9■□□□□ 0.94
HOMER3-204ENST00000539827 FBLIM1Q8WUP2 373 aa20.9■□□□□ 0.94
HOMER3-204ENST00000539827 UBE2FQ969M7 185 aa20.9■□□□□ 0.94
HOMER3-204ENST00000539827 FOLH1BQ9HBA9 442 aa20.9■□□□□ 0.94
HOMER3-204ENST00000539827 SMIM31A0A1B0GVY4 71 aa20.89■□□□□ 0.93
HOMER3-204ENST00000539827 IFNA16P05015 189 aa20.89■□□□□ 0.93
HOMER3-204ENST00000539827 STT3AP46977 705 aa20.89■□□□□ 0.93
HOMER3-204ENST00000539827 RPS6KA3P51812 740 aa20.89■□□□□ 0.93
HOMER3-204ENST00000539827 HSD17B7P56937 341 aa20.89■□□□□ 0.93
HOMER3-204ENST00000539827 SMIM11AP58511 58 aa20.89■□□□□ 0.93
HOMER3-204ENST00000539827 POU6F2P78424 691 aaPredicted RBP20.89■□□□□ 0.93
HOMER3-204ENST00000539827 CCL7P80098 99 aa20.89■□□□□ 0.93
HOMER3-204ENST00000539827 HOXC5Q00444 222 aa20.89■□□□□ 0.93
HOMER3-204ENST00000539827 LAIR1Q6GTX8 287 aa20.89■□□□□ 0.93
HOMER3-204ENST00000539827 TMEM71Q6P5X7 295 aa20.89■□□□□ 0.93
HOMER3-204ENST00000539827 ZNF574Q6ZN55 896 aaPredicted RBP20.89■□□□□ 0.93
HOMER3-204ENST00000539827 ZNF836Q6ZNA1 936 aa20.89■□□□□ 0.93
HOMER3-204ENST00000539827 GPR135Q8IZ08 494 aa20.89■□□□□ 0.93
HOMER3-204ENST00000539827 DTWD2Q8NBA8 298 aa20.89■□□□□ 0.93
HOMER3-204ENST00000539827 BPIFB6Q8NFQ5 453 aa20.89■□□□□ 0.93
HOMER3-204ENST00000539827 PRRC1Q96M27 445 aa20.89■□□□□ 0.93
HOMER3-204ENST00000539827 ZNF350Q9GZX5 532 aa20.89■□□□□ 0.93
HOMER3-204ENST00000539827 CACYBPQ9HB71 228 aaKnown RBP20.89■□□□□ 0.93
HOMER3-204ENST00000539827 NDUFA13Q9P0J0 144 aa20.89■□□□□ 0.93
HOMER3-204ENST00000539827 IFT52Q9Y366 437 aa20.89■□□□□ 0.93
HOMER3-204ENST00000539827 FAAHO00519 579 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 OR10H3O60404 316 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 FMO3P31513 532 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 RNF144AP50876 292 aaPredicted RBP20.88■□□□□ 0.93
HOMER3-204ENST00000539827 PGDP52209 483 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 PEAR1Q5VY43 1037 aaPredicted RBP20.88■□□□□ 0.93
HOMER3-204ENST00000539827 KMT5CQ86Y97 462 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 ZNF619Q8N2I2 560 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 FUZQ9BT04 418 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 NDC1Q9BTX1 674 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 CNPPD1Q9BV87 410 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 ZNF768Q9H5H4 540 aaKnown RBP20.88■□□□□ 0.93
HOMER3-204ENST00000539827 SYNDIG1Q9H7V2 258 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 LANCL2Q9NS86 450 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 SERTAD3Q9UJW9 196 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 ZNF232Q9UNY5 417 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 PCDHGA6Q9Y5G7 932 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 ARRDC5A6NEK1 342 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 SLC1A7O00341 560 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 STX11O75558 287 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 NKX2-2O95096 273 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 PNLIPP16233 465 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 EMDP50402 254 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 TOP3AQ13472 1001 aaPredicted RBP20.88■□□□□ 0.93
HOMER3-204ENST00000539827 MAPK14Q16539 360 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 PODNL1Q6PEZ8 512 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 KLHL17Q6TDP4 642 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 NLGN4XQ8N0W4 816 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 SLC7A13Q8TCU3 470 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 ZNF501Q96CX3 271 aaPredicted RBP20.88■□□□□ 0.93
HOMER3-204ENST00000539827 ZC3H10Q96K80 434 aaKnown RBP20.88■□□□□ 0.93
HOMER3-204ENST00000539827 HRASLS5Q96KN8 279 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 RASSF1Q9NS23 344 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 KLHL28Q9NXS3 571 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 SATB2Q9UPW6 733 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 ERVK-19Q9WJR5 959 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 NTNG1Q9Y2I2 539 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 HSPE1-MOB4S4R3N1 261 aa20.88■□□□□ 0.93
HOMER3-204ENST00000539827 CPSF4LA6NMK7 179 aaKnown RBP20.87■□□□□ 0.93
HOMER3-204ENST00000539827 AHCYL1O43865 530 aa20.87■□□□□ 0.93
HOMER3-204ENST00000539827 ANGPTL1O95841 491 aa20.87■□□□□ 0.93
HOMER3-204ENST00000539827 RPLP0P05388 317 aaKnown RBP20.87■□□□□ 0.93
HOMER3-204ENST00000539827 TNNI3P19429 210 aa20.87■□□□□ 0.93
HOMER3-204ENST00000539827 GCGRP47871 477 aa20.87■□□□□ 0.93
HOMER3-204ENST00000539827 RFX3P48380 749 aa20.87■□□□□ 0.93
HOMER3-204ENST00000539827 PIGFQ07326 219 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms