RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 CPNE3O75131 537 aaKnown RBP12.44□□□□□ -0.42
UBE3B-209ENST00000539584 GPR89BP0CG08 455 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 ACP5P13686 325 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 CELP19835 753 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 SLC6A1P30531 599 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 HTR2BP41595 481 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 SSR2P43308 183 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 RFX3P48380 749 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 P2RX3P56373 397 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 TGM3Q08188 693 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 IKZF1Q13422 519 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 HBMQ6B0K9 141 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 SZRD1Q7Z422 152 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 CDH24Q86UP0 819 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 LRRTM4Q86VH4 590 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 TPRA1Q86W33 373 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 SRFBP1Q8NEF9 429 aaKnown RBP12.44□□□□□ -0.42
UBE3B-209ENST00000539584 OR5M3Q8NGP4 307 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 CD99L2Q8TCZ2 262 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 UPRTQ96BW1 309 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 TOX2Q96NM4 488 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 ZNF649Q9BS31 505 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 MENTQ9BUN1 341 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 FN3KQ9H479 309 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 PIGUQ9H490 435 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 KCNK12Q9HB15 430 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 INPP5EQ9NRR6 644 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 CYSLTR2Q9NS75 346 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 CUEDC1Q9NWM3 386 aaPredicted RBP12.44□□□□□ -0.42
UBE3B-209ENST00000539584 C5AR2Q9P296 337 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 ABT1Q9ULW3 272 aaKnown RBP12.44□□□□□ -0.42
UBE3B-209ENST00000539584 SCN5AQ14524 2016 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 LRIT2A6NDA9 550 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 H7BY64 318 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 EMC8O43402 210 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 RGS9O75916 674 aaPredicted RBP12.44□□□□□ -0.42
UBE3B-209ENST00000539584 OR5F1O95221 314 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 NFATC1O95644 943 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 AGR2O95994 175 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 HMGN2P05204 90 aaKnown RBP12.44□□□□□ -0.42
UBE3B-209ENST00000539584 CISD3P0C7P0 127 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 RBMS1P29558 406 aaKnown RBP12.44□□□□□ -0.42
UBE3B-209ENST00000539584 CA8P35219 290 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 NOGQ13253 232 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 P2RY14Q15391 338 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 TEAD2Q15562 447 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 PGGHGQ32M88 737 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 SDE2Q6IQ49 451 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 CDC73Q6P1J9 531 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 ZNF322Q6U7Q0 402 aaPredicted RBP12.44□□□□□ -0.42
UBE3B-209ENST00000539584 PAMR1Q6UXH9 720 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 LHFPL3Q86UP9 236 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 LMNTD1Q8N9Z9 388 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 OR2T33Q8NG76 320 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 OR8D4Q8NGM9 314 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 PRAP1Q96NZ9 151 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 RAB11FIP5Q9BXF6 653 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 HDHD5Q9BXW7 423 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 RANBP3Q9H6Z4 567 aaPredicted RBP12.44□□□□□ -0.42
UBE3B-209ENST00000539584 TBC1D17Q9HA65 648 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 B3GNT2Q9NY97 397 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 TNFRSF10DQ9UBN6 386 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 ACSL5Q9ULC5 683 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 ENTPD4Q9Y227 616 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 GPR52Q9Y2T5 361 aa12.44□□□□□ -0.42
UBE3B-209ENST00000539584 EDDM13A0A1B0GTR0 161 aa12.43□□□□□ -0.42
UBE3B-209ENST00000539584 A0A1W2PPV9 198 aa12.43□□□□□ -0.42
UBE3B-209ENST00000539584 DUXAA6NLW8 204 aa12.43□□□□□ -0.42
UBE3B-209ENST00000539584 WASHC1A8K0Z3 465 aa12.43□□□□□ -0.42
UBE3B-209ENST00000539584 CCL16O15467 120 aa12.43□□□□□ -0.42
UBE3B-209ENST00000539584 KLF4O43474 513 aa12.43□□□□□ -0.42
UBE3B-209ENST00000539584 FGF18O76093 207 aa12.43□□□□□ -0.42
UBE3B-209ENST00000539584 DHFRP00374 187 aa12.43□□□□□ -0.42
UBE3B-209ENST00000539584 ADRB3P13945 408 aa12.43□□□□□ -0.42
UBE3B-209ENST00000539584 M6PRP20645 277 aa12.43□□□□□ -0.42
UBE3B-209ENST00000539584 MPIP34949 423 aa12.43□□□□□ -0.42
UBE3B-209ENST00000539584 ATP6V1E1P36543 226 aa12.43□□□□□ -0.42
UBE3B-209ENST00000539584 PRMT2P55345 433 aa12.43□□□□□ -0.42
UBE3B-209ENST00000539584 CSNK1G2P78368 415 aa12.43□□□□□ -0.42
UBE3B-209ENST00000539584 PRDX1Q06830 199 aaKnown RBP12.43□□□□□ -0.42
UBE3B-209ENST00000539584 FUT5Q11128 374 aa12.43□□□□□ -0.42
UBE3B-209ENST00000539584 ELAVL3Q14576 367 aaKnown RBP12.43□□□□□ -0.42
UBE3B-209ENST00000539584 LASP1Q14847 261 aaKnown RBP12.43□□□□□ -0.42
UBE3B-209ENST00000539584 POM121L1PQ3SYA9 428 aa12.43□□□□□ -0.42
UBE3B-209ENST00000539584 EOGTQ5NDL2 527 aa12.43□□□□□ -0.42
UBE3B-209ENST00000539584 ZNF57Q68EA5 555 aaPredicted RBP12.43□□□□□ -0.42
UBE3B-209ENST00000539584 KIAA1161Q6NSJ0 714 aa12.43□□□□□ -0.42
UBE3B-209ENST00000539584 MBOAT2Q6ZWT7 520 aa12.43□□□□□ -0.42
UBE3B-209ENST00000539584 UTS2BQ765I0 119 aa12.43□□□□□ -0.42
UBE3B-209ENST00000539584 UBE2J2Q8N2K1 259 aa12.43□□□□□ -0.42
UBE3B-209ENST00000539584 CADM2Q8N3J6 435 aa12.43□□□□□ -0.42
UBE3B-209ENST00000539584 MYLIPQ8WY64 445 aa12.43□□□□□ -0.42
UBE3B-209ENST00000539584 SNAPC3Q92966 411 aa12.43□□□□□ -0.42
UBE3B-209ENST00000539584 RAB7BQ96AH8 199 aa12.43□□□□□ -0.42
UBE3B-209ENST00000539584 SECISBP2Q96T21 854 aaKnown RBP12.43□□□□□ -0.42
UBE3B-209ENST00000539584 TMED9Q9BVK6 235 aa12.43□□□□□ -0.42
UBE3B-209ENST00000539584 BEX2Q9BXY8 128 aa12.43□□□□□ -0.42
UBE3B-209ENST00000539584 B3GAT2Q9NPZ5 323 aa12.43□□□□□ -0.42
UBE3B-209ENST00000539584 PLAGL1Q9UM63 463 aa12.43□□□□□ -0.42
UBE3B-209ENST00000539584 ING4Q9UNL4 249 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms