RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 ZIC2O95409 532 aaPredicted RBP11.97□□□□□ -0.49
CCDC42-202ENST00000539522 FBXO45P0C2W1 286 aa11.97□□□□□ -0.49
CCDC42-202ENST00000539522 ABCD3P28288 659 aa11.97□□□□□ -0.49
CCDC42-202ENST00000539522 TNFSF10P50591 281 aa11.97□□□□□ -0.49
CCDC42-202ENST00000539522 FUT5Q11128 374 aa11.97□□□□□ -0.49
CCDC42-202ENST00000539522 LASP1Q14847 261 aaKnown RBP11.97□□□□□ -0.49
CCDC42-202ENST00000539522 MAPK11Q15759 364 aa11.97□□□□□ -0.49
CCDC42-202ENST00000539522 COX20Q5RI15 118 aa11.97□□□□□ -0.49
CCDC42-202ENST00000539522 C6orf163Q5TEZ5 329 aa11.97□□□□□ -0.49
CCDC42-202ENST00000539522 Q6ZS92 163 aa11.97□□□□□ -0.49
CCDC42-202ENST00000539522 ASB18Q6ZVZ8 466 aa11.97□□□□□ -0.49
CCDC42-202ENST00000539522 SLC29A4Q7RTT9 530 aa11.97□□□□□ -0.49
CCDC42-202ENST00000539522 OLIG3Q7RTU3 272 aa11.97□□□□□ -0.49
CCDC42-202ENST00000539522 C6orf120Q7Z4R8 191 aa11.97□□□□□ -0.49
CCDC42-202ENST00000539522 ARPINQ7Z6K5 226 aa11.97□□□□□ -0.49
CCDC42-202ENST00000539522 ULK2Q8IYT8 1036 aa11.97□□□□□ -0.49
CCDC42-202ENST00000539522 OR5D16Q8NGK9 328 aa11.97□□□□□ -0.49
CCDC42-202ENST00000539522 PIK3R3Q92569 461 aa11.97□□□□□ -0.49
CCDC42-202ENST00000539522 HGDQ93099 445 aa11.97□□□□□ -0.49
CCDC42-202ENST00000539522 NEURL3Q96EH8 262 aa11.97□□□□□ -0.49
CCDC42-202ENST00000539522 SLC35A4Q96G79 324 aa11.97□□□□□ -0.49
CCDC42-202ENST00000539522 LCORQ96JN0 433 aaPredicted RBP11.97□□□□□ -0.49
CCDC42-202ENST00000539522 MS4A4EQ96PG1 132 aa11.97□□□□□ -0.49
CCDC42-202ENST00000539522 PANX1Q96RD7 426 aa11.97□□□□□ -0.49
CCDC42-202ENST00000539522 TRIM8Q9BZR9 551 aa11.97□□□□□ -0.49
CCDC42-202ENST00000539522 IL1RL2Q9HB29 575 aa11.97□□□□□ -0.49
CCDC42-202ENST00000539522 NEUROD4Q9HD90 331 aa11.97□□□□□ -0.49
CCDC42-202ENST00000539522 SPAG4Q9NPE6 437 aa11.97□□□□□ -0.49
CCDC42-202ENST00000539522 ADA2Q9NZK5 511 aa11.97□□□□□ -0.49
CCDC42-202ENST00000539522 FLRT3Q9NZU0 649 aa11.97□□□□□ -0.49
CCDC42-202ENST00000539522 VAPAQ9P0L0 249 aa11.97□□□□□ -0.49
CCDC42-202ENST00000539522 TMEM181Q9P2C4 612 aa11.97□□□□□ -0.49
CCDC42-202ENST00000539522 YARS2Q9Y2Z4 477 aaKnown RBP11.97□□□□□ -0.49
CCDC42-202ENST00000539522 PCDHB14Q9Y5E9 798 aa11.97□□□□□ -0.49
CCDC42-202ENST00000539522 PINLYPA6NC86 204 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 OR5H15A6NDH6 313 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 C17orf51A8MQB3 221 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 COQ9O75208 318 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 WISP2O76076 250 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 ZCCHC18P0CG32 403 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 UQCRC2P22695 453 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 ME2P23368 584 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 PTGDSP41222 190 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 HLCSP50747 726 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 SSR4P51571 173 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 FBXW4P57775 412 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 AP2B1P63010 937 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 ZNF155Q12901 538 aaPredicted RBP11.96□□□□□ -0.49
CCDC42-202ENST00000539522 SELPLGQ14242 412 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 PLEKHN1Q494U1 663 aaPredicted RBP11.96□□□□□ -0.49
CCDC42-202ENST00000539522 GLIPR1L2Q4G1C9 344 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 SOWAHCQ53LP3 525 aaPredicted RBP11.96□□□□□ -0.49
CCDC42-202ENST00000539522 SAMD4BQ5PRF9 694 aaKnown RBP11.96□□□□□ -0.49
CCDC42-202ENST00000539522 C6orf10Q5SRN2 563 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 ABHD17BQ5VST6 288 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 SLC6A19Q695T7 634 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 NANOGP8Q6NSW7 305 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 DHDDSQ86SQ9 333 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 SLC44A2Q8IWA5 706 aaPredicted RBP11.96□□□□□ -0.49
CCDC42-202ENST00000539522 SLC15A3Q8IY34 581 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 OR5L2Q8NGL0 311 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 FAM110BQ8TC76 370 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 MIPOL1Q8TD10 442 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 RNF138Q8WVD3 245 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 SLC39A7Q92504 469 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 TMBIM1Q969X1 311 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 SCMH1Q96GD3 660 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 UBL7Q96S82 380 aaPredicted RBP11.96□□□□□ -0.49
CCDC42-202ENST00000539522 CGREF1Q99674 301 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 ARHGAP9Q9BRR9 750 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 SLC35A5Q9BS91 424 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 MFRPQ9BY79 579 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 RTN4RQ9BZR6 473 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 SLC25A18Q9H1K4 315 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 NANOGQ9H9S0 305 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 DEPPQ9NTK1 212 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 PRODH2Q9UF12 536 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 PCDHGB4Q9UN71 923 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 L3MBTL1Q9Y468 752 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 ZNF451Q9Y4E5 1061 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 PCDHGB7Q9Y5F8 929 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 NPFFR2Q9Y5X5 522 aa11.96□□□□□ -0.49
CCDC42-202ENST00000539522 CHCHD2Q9Y6H1 151 aaPredicted RBP11.96□□□□□ -0.49
CCDC42-202ENST00000539522 PRRC2CQ9Y520 2896 aaKnown RBP11.95□□□□□ -0.5
CCDC42-202ENST00000539522 RFXANKO14593 260 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 UGT2B11O75310 529 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 PRB1P04280 392 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 CCL3P10147 92 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 SLC6A2P23975 617 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 SOAT1P35610 550 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 EEFSECP57772 596 aaKnown RBP11.95□□□□□ -0.5
CCDC42-202ENST00000539522 ELF3P78545 371 aaPredicted RBP11.95□□□□□ -0.5
CCDC42-202ENST00000539522 TP53BP2Q13625 1128 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 OR1C1Q15619 314 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 NTRK2Q16620 822 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 RUNDC3AQ59EK9 446 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 CCNJQ5T5M9 372 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 BICRALQ6AI39 1079 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 CDC73Q6P1J9 531 aa11.95□□□□□ -0.5
CCDC42-202ENST00000539522 IL20RBQ6UXL0 311 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms