RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 SERPIND1P05546 499 aa11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 PRKACBP22694 351 aa11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 POU6F2P78424 691 aaPredicted RBP11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 ZNF750Q32MQ0 723 aa11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 CXorf40AQ8TE69 158 aa11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 SMPDL3AQ92484 453 aa11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 SENP5Q96HI0 755 aaPredicted RBP11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 TREX2Q9BQ50 279 aaPredicted RBP11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 MND1Q9BWT6 205 aa11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 FZD3Q9NPG1 666 aa11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 TRPC4Q9UBN4 977 aa11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 PRELID1Q9Y255 219 aa11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 MRPS7Q9Y2R9 242 aaKnown RBP11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 LOC105371267A0A1B0GV96 52 aa11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 LINC01553A4QN01 128 aa11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 OR1F1O43749 312 aa11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 AKAP8O43823 692 aaKnown RBP11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 EPHX1P07099 455 aa11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 OSMP13725 252 aa11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 KCNJ5P48544 419 aa11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 GZMKP49863 264 aa11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 CLCNKAP51800 687 aa11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 AGFG1P52594 562 aaKnown RBP11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 REEP5Q00765 189 aa11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 BCL2L15Q5TBC7 163 aa11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 XKRXQ6PP77 449 aa11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 ADAMTSL4Q6UY14 1074 aa11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 BADQ92934 168 aa11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 KCTD7Q96MP8 289 aa11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 TTTY10Q9BZA0 68 aa11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 STMN3Q9NZ72 180 aa11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 CNIH4Q9P003 139 aa11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 PLEKHM1Q9Y4G2 1056 aa11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 CCT3P49368 545 aaKnown RBP11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 CCR8P51685 355 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 CSNK1G2P78368 415 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 DUSP2Q05923 314 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 MRPL28Q13084 256 aaKnown RBP11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 ASAH1Q13510 395 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 ZNF267Q14586 743 aaPredicted RBP11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 FAM27D1Q5T7N8 215 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 PGBD2Q6P3X8 592 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 LRRTM4Q86VH4 590 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 CCDC28AQ8IWP9 274 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 SETD6Q8TBK2 473 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 TRIM63Q969Q1 353 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 RIPOR3Q96MK2 946 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 AIF1LQ9BQI0 150 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 GLIPR2Q9H4G4 154 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 PELI2Q9HAT8 420 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 AHSPQ9NZD4 102 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 A4GNTQ9UNA3 340 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 A0A1W2PPK0 400 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 ZC3H12DA2A288 527 aaKnown RBP11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 LYRM1O43325 122 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 WASP42768 502 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 PODNL1Q6PEZ8 512 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 FAM109AQ8N4B1 249 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 OR4M2Q8NGB6 313 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 ZFAND1Q8TCF1 268 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 KAT2AQ92830 837 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 ASB16Q96NS5 453 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 C17orf62Q9BQA9 187 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 MKRN2Q9H000 416 aaKnown RBP11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 NDUFB11Q9NX14 153 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 CNOT2Q9NZN8 540 aaKnown RBP11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 TRPM6Q9BX84 2022 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 LOC105369274A0A096LPK9 316 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 FAM183AA6NL82 134 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 BTN3A3O00478 584 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 NDUFS4O43181 175 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 TBX19O60806 448 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 ATP6V1E1P36543 226 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 RHAGQ02094 409 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 FUT5Q11128 374 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 RPA4Q13156 261 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 ILKQ13418 452 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 FGL2Q14314 439 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 FCN2Q15485 313 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 TMEM240Q5SV17 173 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 IDNKQ5T6J7 187 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 RTL10Q7L3V2 364 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 MARCH9Q86YJ5 346 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 OR4N4Q8N0Y3 316 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 DOK4Q8TEW6 326 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 SMG7Q92540 1137 aaKnown RBP11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 PPP1R16AQ96I34 528 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 ZNF354BQ96LW1 612 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 INSM2Q96T92 566 aaPredicted RBP11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 DPH7Q9BTV6 452 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 OR51I1Q9H343 314 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 ACAD8Q9UKU7 415 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 SLC9A8Q9Y2E8 581 aa11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 RPL36Q9Y3U8 105 aaKnown RBP11.8□□□□□ -0.52
SFSWAP-208ENST00000539506 KNL1Q8NG31 2342 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 A0A0A6YYD5 115 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 SH3D21A4FU49 640 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 TBC1D3BA6NDS4 549 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 I3L521 148 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 SLC28A2O43868 658 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms