RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 WDR77Q9BQA1 342 aaPredicted RBP13.77□□□□□ -0.21
CACNB1-206ENST00000539338 NLKQ9UBE8 527 aa13.77□□□□□ -0.21
CACNB1-206ENST00000539338 BTNL2Q9UIR0 455 aa13.77□□□□□ -0.21
CACNB1-206ENST00000539338 USP22Q9UPT9 525 aa13.77□□□□□ -0.21
CACNB1-206ENST00000539338 FAM155AB1AL88 458 aaPredicted RBP13.76□□□□□ -0.21
CACNB1-206ENST00000539338 IL7P13232 177 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 RNH1P13489 461 aaKnown RBP13.76□□□□□ -0.21
CACNB1-206ENST00000539338 FCRLBQ6BAA4 426 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 SPAG16Q8N0X2 631 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 COQ8AQ8NI60 647 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 SLC41A3Q96GZ6 507 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 DMRT3Q9NQL9 472 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 HTR3EA5X5Y0 456 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 KLHL33A6NCF5 533 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 GABRR3A8MPY1 467 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 ARNTLO00327 626 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 PPM1BO75688 479 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 PCGF2P35227 344 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 CLRN1P58418 232 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 SELENOVP59797 346 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 ZNF283Q8N7M2 679 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 CLEC1AQ8NC01 280 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 OR51L1Q8NGJ5 315 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 OR5D16Q8NGK9 328 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 HS6ST2Q96MM7 605 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 MACROD1Q9BQ69 325 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 BRF2Q9HAW0 419 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 RDH14Q9HBH5 336 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 SACM1LQ9NTJ5 587 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 C14orf166Q9Y224 244 aaKnown RBP13.76□□□□□ -0.21
CACNB1-206ENST00000539338 A0A1W2PQL4 384 aaPredicted RBP13.76□□□□□ -0.21
CACNB1-206ENST00000539338 UGDHO60701 494 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 VNN2O95498 520 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 CERS1P27544 350 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 SOX3P41225 446 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 CDKN2CP42773 168 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 MAGEA12P43365 314 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 DSC1Q08554 894 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 PLCXD2Q0VAA5 305 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 NTRK2Q16620 822 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 TMEM225Q6GV28 225 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 KCTD18Q6PI47 426 aaPredicted RBP13.76□□□□□ -0.21
CACNB1-206ENST00000539338 SAMD8Q96LT4 415 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 NTMT1Q9BV86 223 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 SLC17A9Q9BYT1 436 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 MYH4Q9Y623 1939 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 SIPA1L3O60292 1781 aaPredicted RBP13.76□□□□□ -0.21
CACNB1-206ENST00000539338 FUOMA2VDF0 154 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 CAPNS1P04632 268 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 CTSCP53634 463 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 SNTB2Q13425 540 aaKnown RBP13.76□□□□□ -0.21
CACNB1-206ENST00000539338 KEAP1Q14145 624 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 OCLNQ16625 522 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 PNCKQ6P2M8 343 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 PEX11GQ96HA9 241 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 ZNF350Q9GZX5 532 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 OR51E2Q9H255 320 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 RXFP3Q9NSD7 469 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 ATXN7L1Q9ULK2 861 aaPredicted RBP13.76□□□□□ -0.21
CACNB1-206ENST00000539338 CLEC4EQ9ULY5 219 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 CARD8Q9Y2G2 431 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 MAB21L2Q9Y586 359 aa13.76□□□□□ -0.21
CACNB1-206ENST00000539338 DDX60Q8IY21 1712 aaKnown RBP13.75□□□□□ -0.21
CACNB1-206ENST00000539338 CHD4Q14839 1912 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 TCRBV5S1A1TA0A578 114 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 ANXA3P12429 323 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 HNRNPA2B1P22626 353 aaKnown RBP13.75□□□□□ -0.21
CACNB1-206ENST00000539338 VEZF1Q14119 521 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 DEFB110Q30KQ9 67 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 ALG10BQ5I7T1 473 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 LRFN4Q6PJG9 635 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 Q7L0L9 218 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 CNN2Q99439 309 aaKnown RBP13.75□□□□□ -0.21
CACNB1-206ENST00000539338 PTGES2Q9H7Z7 377 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 TMEM184CQ9NVA4 438 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 FAIMQ9NVQ4 179 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 ENPP5Q9UJA9 477 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 STRCQ7RTU9 1775 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 OR52A4PA6NMU1 304 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 WASH3PC4AMC7 463 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 H2BFMP0C1H6 154 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 H2AFB2P0C5Z0 115 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 CEBPBP17676 345 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 C9orf50Q5SZB4 431 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 KCTD11Q693B1 232 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 ARHGAP11AQ6P4F7 1023 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 FIGLAQ6QHK4 219 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 SERPINA11Q86U17 422 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 IGFN1Q86VF2 1251 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 RETREG3Q86VR2 466 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 ANKK1Q8NFD2 765 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 CASD1Q96PB1 797 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 MAP3K3Q99759 626 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 ZNF471Q9BX82 626 aaPredicted RBP13.75□□□□□ -0.21
CACNB1-206ENST00000539338 TMEM45AQ9NWC5 275 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 ANKMY1Q9P2S6 941 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 DHDHQ9UQ10 334 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 GPR89AB7ZAQ6 455 aa13.75□□□□□ -0.21
CACNB1-206ENST00000539338 RNASET2O00584 256 aaKnown RBP13.75□□□□□ -0.21
CACNB1-206ENST00000539338 OR2B3O76000 313 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms