RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 OR10G2Q8NGC3 310 aa10.08□□□□□ -0.8
CLIP1-210ENST00000538120 OR4D11Q8NGI4 311 aa10.08□□□□□ -0.8
CLIP1-210ENST00000538120 OTUB1Q96FW1 271 aaPredicted RBP10.08□□□□□ -0.8
CLIP1-210ENST00000538120 C16orf58Q96GQ5 468 aa10.08□□□□□ -0.8
CLIP1-210ENST00000538120 Q96MT0 163 aa10.08□□□□□ -0.8
CLIP1-210ENST00000538120 GABARAPL3Q9BY60 117 aa10.08□□□□□ -0.8
CLIP1-210ENST00000538120 TPSD1Q9BZJ3 242 aa10.08□□□□□ -0.8
CLIP1-210ENST00000538120 MMP27Q9H306 513 aa10.08□□□□□ -0.8
CLIP1-210ENST00000538120 TP63Q9H3D4 680 aaPredicted RBP10.08□□□□□ -0.8
CLIP1-210ENST00000538120 CCNB1IP1Q9NPC3 277 aa10.08□□□□□ -0.8
CLIP1-210ENST00000538120 TAS2R16Q9NYV7 291 aa10.08□□□□□ -0.8
CLIP1-210ENST00000538120 CDV3Q9UKY7 258 aaKnown RBP10.08□□□□□ -0.8
CLIP1-210ENST00000538120 MRPS2Q9Y399 296 aaKnown RBP10.08□□□□□ -0.8
CLIP1-210ENST00000538120 KIR2DS5A0A0G2JLQ3 304 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 A0A0G2JNG1 304 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 KIR2DS3K7RE56 304 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 PCDH17O14917 1159 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 SLC28A2O43868 658 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 GDF9O60383 454 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 CSNK2A2P19784 350 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-210ENST00000538120 CASP3P42574 277 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 CTSKP43235 329 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 KCNJ5P48544 419 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 PRKAG1P54619 331 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 PPP1CAP62136 330 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 TGM3Q08188 693 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 KIR2DS5Q14953 304 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 TMEM107Q6UX40 140 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 TAF8Q7Z7C8 310 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 FANCMQ8IYD8 2048 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 TSTD1Q8NFU3 115 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 BAHD1Q8TBE0 780 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-210ENST00000538120 SFXN5Q8TD22 340 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 XAGE5Q8WWM1 108 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 TREX2Q9BQ50 279 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-210ENST00000538120 YIPF4Q9BSR8 244 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 GPR83Q9NYM4 423 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 KCND3Q9UK17 655 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 SLC6A14Q9UN76 642 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 NOSIPQ9Y314 301 aaKnown RBP10.07□□□□□ -0.8
CLIP1-210ENST00000538120 KCNE3Q9Y6H6 103 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 MDC1Q14676 2089 aaKnown RBP10.07□□□□□ -0.8
CLIP1-210ENST00000538120 ISPDA4D126 451 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 C2orf74A8MZ97 194 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 FAM47E-STBD1D6RA91 191 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 H0YGG7 62 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 ASNA1O43681 348 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 WNT1P04628 370 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 HMGN2P05204 90 aaKnown RBP10.07□□□□□ -0.8
CLIP1-210ENST00000538120 STSP08842 583 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 SLC35G6P0C7Q6 338 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 RHCEP18577 417 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 ARF3P61204 181 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-210ENST00000538120 DOC2BQ14184 412 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 LTB4RQ15722 352 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 ZNF181Q2M3W8 571 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 SZRD1Q7Z422 152 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 ZNF438Q7Z4V0 828 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 BPHLQ86WA6 291 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-210ENST00000538120 ZNF761Q86XN6 746 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-210ENST00000538120 RBM45Q8IUH3 476 aaKnown RBP10.07□□□□□ -0.8
CLIP1-210ENST00000538120 P3H2Q8IVL5 708 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 LGI4Q8N135 537 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 OR9A2Q8NGT5 310 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 ZCCHC10Q8TBK6 192 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 GGHQ92820 318 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 CLIP3Q96DZ5 547 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 ELP4Q96EB1 424 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 ZNF486Q96H40 463 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-210ENST00000538120 NIPSNAP1Q9BPW8 284 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 ANKRA2Q9H9E1 313 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 SEMA3GQ9NS98 782 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 HRASLS2Q9NWW9 162 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 RHCGQ9UBD6 479 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 P2RX2Q9UBL9 471 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 ENTPD4Q9Y227 616 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 IFT52Q9Y366 437 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 ENTPD2Q9Y5L3 495 aa10.07□□□□□ -0.8
CLIP1-210ENST00000538120 OR5K4A6NMS3 321 aa10.06□□□□□ -0.8
CLIP1-210ENST00000538120 ICMTO60725 284 aa10.06□□□□□ -0.8
CLIP1-210ENST00000538120 EPPINO95925 133 aa10.06□□□□□ -0.8
CLIP1-210ENST00000538120 PTHP01270 115 aa10.06□□□□□ -0.8
CLIP1-210ENST00000538120 IFNW1P05000 195 aa10.06□□□□□ -0.8
CLIP1-210ENST00000538120 CHRM4P08173 479 aa10.06□□□□□ -0.8
CLIP1-210ENST00000538120 ADRA2AP08913 450 aa10.06□□□□□ -0.8
CLIP1-210ENST00000538120 HSMCR30P0CW71 290 aa10.06□□□□□ -0.8
CLIP1-210ENST00000538120 NR2F6P10588 404 aa10.06□□□□□ -0.8
CLIP1-210ENST00000538120 ATF4P18848 351 aaPredicted RBP10.06□□□□□ -0.8
CLIP1-210ENST00000538120 UGT2B10P36537 528 aa10.06□□□□□ -0.8
CLIP1-210ENST00000538120 MAN2A2P49641 1150 aa10.06□□□□□ -0.8
CLIP1-210ENST00000538120 COPZ1P61923 177 aa10.06□□□□□ -0.8
CLIP1-210ENST00000538120 TNFRSF17Q02223 184 aa10.06□□□□□ -0.8
CLIP1-210ENST00000538120 GANABQ14697 944 aaKnown RBP10.06□□□□□ -0.8
CLIP1-210ENST00000538120 LASP1Q14847 261 aaKnown RBP10.06□□□□□ -0.8
CLIP1-210ENST00000538120 DEFB134Q4QY38 66 aa10.06□□□□□ -0.8
CLIP1-210ENST00000538120 SLC46A3Q7Z3Q1 461 aa10.06□□□□□ -0.8
CLIP1-210ENST00000538120 DEFB119Q8N690 84 aa10.06□□□□□ -0.8
CLIP1-210ENST00000538120 OR9Q2Q8NGE9 314 aa10.06□□□□□ -0.8
CLIP1-210ENST00000538120 ZNF675Q8TD23 568 aa10.06□□□□□ -0.8
CLIP1-210ENST00000538120 KLHDC7BQ96G42 594 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms