RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 VCANP13611 3396 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 DNAH14Q0VDD8 3507 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 TMEM129A0AVI4 362 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 TRABD2BA6NFA1 517 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 ANKDD1BA6NHY2 528 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 SMAD6O43541 496 aaKnown RBP10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 GUCA1CO95843 209 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 PDYNP01213 254 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 OPN1SWP03999 348 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 EPCAMP16422 314 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 RHOQP17081 205 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 NFYAP23511 347 aaPredicted RBP10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 RBMS1P29558 406 aaKnown RBP10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 RORAP35398 523 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 GDF5P43026 501 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 DGKEP52429 567 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 RPS24P62847 133 aaKnown RBP10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 RGNQ15493 299 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 WDR53Q7Z5U6 358 aaPredicted RBP10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 BCDIN3DQ7Z5W3 292 aaKnown RBP10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 TCEANCQ8N8B7 351 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 NANPQ8TBE9 248 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 ZDHHC1Q8WTX9 485 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 GATAD2BQ8WXI9 593 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 CNOT9Q92600 299 aaKnown RBP10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 HMCESQ96FZ2 354 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 CMTM7Q96FZ5 175 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 ARL5BQ96KC2 179 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 C12orf66Q96MD2 445 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 YIPF4Q9BSR8 244 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 KLF16Q9BXK1 252 aaPredicted RBP10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 TINAGL1Q9GZM7 467 aaPredicted RBP10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 FN3KQ9H479 309 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 GAREM1Q9H706 876 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 LATS2Q9NRM7 1088 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 TMEM248Q9NWD8 314 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 FAM120CQ9NX05 1096 aaKnown RBP10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 DCAF16Q9NXF7 216 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 OR6C2Q9NZP2 312 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 MAFFQ9ULX9 164 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 YBX2Q9Y2T7 364 aaKnown RBP10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 SHISA3A0PJX4 238 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 MCRIP1C9JLW8 97 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 C5orf67F2Z3F1 127 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 F5H5T6 163 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 TEX46H3BTG2 121 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 PEX14O75381 377 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 ADAP00813 363 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 RAB3BP20337 219 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 PPIBP23284 216 aaKnown RBP10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 PRPH2P23942 346 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 ATP5A1P25705 553 aaKnown RBP10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 ACSL1P33121 698 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 HNF1BP35680 557 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 CCR2P41597 374 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 TTPAP49638 278 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 SMAD3P84022 425 aaKnown RBP10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 FGL2Q14314 439 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 HLXQ14774 488 aaPredicted RBP10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 SFRP5Q5T4F7 317 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 OR2G6Q5TZ20 316 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 CMIPQ8IY22 773 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 GPR135Q8IZ08 494 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 CLECL1Q8IZS7 167 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 UMODL1-AS1Q8N2C9 162 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 ARIH2OSQ8N7S6 290 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 ZNF527Q8NB42 609 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 OR56B4Q8NH76 319 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 RPLP0P6Q8NHW5 317 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 NEIL3Q8TAT5 605 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 ADAMTS19Q8TE59 1207 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 ZNF251Q9BRH9 671 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 TMPRSS13Q9BYE2 586 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 SEMA4CQ9C0C4 833 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 SAP130Q9H0E3 1048 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 ZNF275Q9NSD4 429 aaPredicted RBP10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 ZSCAN32Q9NX65 697 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 MARK1Q9P0L2 795 aa10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 TP53BP1Q12888 1972 aaPredicted RBP10.7□□□□□ -0.7
SEMA4D-221ENST00000537934 MTCL1Q9Y4B5 1905 aaKnown RBP10.69□□□□□ -0.7
SEMA4D-221ENST00000537934 CCDC85CA6NKD9 419 aa10.69□□□□□ -0.7
SEMA4D-221ENST00000537934 DRGXA6NNA5 263 aa10.69□□□□□ -0.7
SEMA4D-221ENST00000537934 KPNA3O00505 521 aaPredicted RBP10.69□□□□□ -0.7
SEMA4D-221ENST00000537934 SGCEO43556 437 aa10.69□□□□□ -0.7
SEMA4D-221ENST00000537934 TSPAN3O60637 253 aa10.69□□□□□ -0.7
SEMA4D-221ENST00000537934 EIF1BO60739 113 aaKnown RBP10.69□□□□□ -0.7
SEMA4D-221ENST00000537934 RP2O75695 350 aa10.69□□□□□ -0.7
SEMA4D-221ENST00000537934 TFP02787 698 aa10.69□□□□□ -0.7
SEMA4D-221ENST00000537934 OR1E1P30953 314 aa10.69□□□□□ -0.7
SEMA4D-221ENST00000537934 CHI3L1P36222 383 aaPredicted RBP10.69□□□□□ -0.7
SEMA4D-221ENST00000537934 EIF1P41567 113 aaKnown RBP10.69□□□□□ -0.7
SEMA4D-221ENST00000537934 SLC11A2P49281 568 aa10.69□□□□□ -0.7
SEMA4D-221ENST00000537934 ERVK-25P63136 954 aa10.69□□□□□ -0.7
SEMA4D-221ENST00000537934 TAF1AQ15573 450 aaPredicted RBP10.69□□□□□ -0.7
SEMA4D-221ENST00000537934 MICBQ29980 383 aa10.69□□□□□ -0.7
SEMA4D-221ENST00000537934 ZNF697Q5TEC3 545 aa10.69□□□□□ -0.7
SEMA4D-221ENST00000537934 FAM26EQ8N5C1 309 aa10.69□□□□□ -0.7
SEMA4D-221ENST00000537934 OR4K2Q8NGD2 314 aa10.69□□□□□ -0.7
SEMA4D-221ENST00000537934 HUS1BQ8NHY5 278 aa10.69□□□□□ -0.7
SEMA4D-221ENST00000537934 DMRTA2Q96SC8 542 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms