RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 TUBG2Q9NRH3 451 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 EFCAB7A8K855 629 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 SLC34A2O95436 690 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 P04436 131 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 SNU13P55769 128 aaKnown RBP10.11□□□□□ -0.79
CLIP1-209ENST00000537178 CDK3Q00526 305 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 EIF4HQ15056 248 aaKnown RBP10.11□□□□□ -0.79
CLIP1-209ENST00000537178 UNC50Q53HI1 259 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 ELP2Q6IA86 826 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 TMEM107Q6UX40 140 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 CPT1CQ8TCG5 803 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 THAP3Q8WTV1 239 aaPredicted RBP10.11□□□□□ -0.79
CLIP1-209ENST00000537178 LPAR4Q99677 370 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 MRI1Q9BV20 369 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 CCDC106Q9BWC9 280 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 SAV1Q9H4B6 383 aaPredicted RBP10.11□□□□□ -0.79
CLIP1-209ENST00000537178 ERVK13-1Q9NX77 482 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 A0A0D9SEW6 157 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 TRAPPC13A5PLN9 417 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 FOSL1P15407 271 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 ACRV1P26436 265 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 RAB28P51157 221 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 TAS2R31P59538 309 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 RPS15P62841 145 aaKnown RBP10.11□□□□□ -0.79
CLIP1-209ENST00000537178 PTPRRQ15256 657 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 GDPGP1Q6ZNW5 385 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 ACBD4Q8NC06 268 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 ADAMTS19Q8TE59 1207 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 ASB4Q9Y574 426 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 MYH11P35749 1972 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 ZNF541Q9H0D2 1346 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 CCDC163A0A0D9SF12 145 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 A0A1B0GV50 99 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 ANHXE9PGG2 379 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 ACOT7O00154 380 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 SLC1A7O00341 560 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 TFPTP0C1Z6 253 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 BDKRB2P30411 391 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 HTR2BP41595 481 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 TAS2R38P59533 333 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 TDGQ13569 410 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 ELAVL3Q14576 367 aaKnown RBP10.11□□□□□ -0.79
CLIP1-209ENST00000537178 AWAT2Q6E213 333 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 DUS1LQ6P1R4 473 aaKnown RBP10.11□□□□□ -0.79
CLIP1-209ENST00000537178 NXPE4Q6UWF7 544 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 PRSS48Q7RTY5 328 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 DTX3Q8N9I9 347 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 C7orf43Q8WVR3 580 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 RADILQ96JH8 1075 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 SAMD11Q96NU1 681 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 MTHFD2LQ9H903 347 aaPredicted RBP10.11□□□□□ -0.79
CLIP1-209ENST00000537178 CDH20Q9HBT6 801 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 RLIMQ9NVW2 624 aa10.11□□□□□ -0.79
CLIP1-209ENST00000537178 WRAP73Q9P2S5 460 aaPredicted RBP10.11□□□□□ -0.79
CLIP1-209ENST00000537178 NAP1L6A6NFF2 107 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 SULT1C2O00338 296 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 SERPINE2P07093 398 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 GRPRP30550 384 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 GPR4P46093 362 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 RGS6P49758 472 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 GRM7Q14831 915 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 ANKRD54Q6NXT1 300 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 TRAPPC6BQ86SZ2 158 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 OR4K13Q8NH42 304 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 OR8K5Q8NH50 307 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 NSUN5Q96P11 429 aaKnown RBP10.1□□□□□ -0.79
CLIP1-209ENST00000537178 FUNDC2Q9BWH2 189 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 ZBTB20Q9HC78 741 aaPredicted RBP10.1□□□□□ -0.79
CLIP1-209ENST00000537178 CPNE5Q9HCH3 593 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 SPHK2Q9NRA0 654 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 GPR34Q9UPC5 381 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 GJE1A6NN92 205 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 BCAS1O75363 584 aaPredicted RBP10.1□□□□□ -0.79
CLIP1-209ENST00000537178 KLF8O95600 359 aaPredicted RBP10.1□□□□□ -0.79
CLIP1-209ENST00000537178 GNB3P16520 340 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 PBX2P40425 430 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 TAS2R20P59543 309 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 METTL11BQ5VVY1 283 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 DPY19L4Q7Z388 723 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 SGPP2Q8IWX5 399 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 ESX1Q8N693 406 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 SYT14Q8NB59 555 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 OR5AK2Q8NH90 309 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 RNF128Q8TEB7 428 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 SGCZQ96LD1 299 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 RARRES3Q9UL19 164 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 YARS2Q9Y2Z4 477 aaKnown RBP10.1□□□□□ -0.79
CLIP1-209ENST00000537178 SLC22A5O76082 557 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 RETP07949 1114 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 SYPP08247 313 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 ZNF43P17038 809 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 MSR1P21757 451 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 GKP32189 559 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 BMXP51813 675 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 CTXN1P60606 82 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 NKX6-1P78426 367 aaPredicted RBP10.1□□□□□ -0.79
CLIP1-209ENST00000537178 GRM2Q14416 872 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 CCL14Q16627 93 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 PNCKQ6P2M8 343 aa10.1□□□□□ -0.79
CLIP1-209ENST00000537178 LEG1Q6P5S2 330 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms