RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 L3MBTL1Q9Y468 752 aa13□□□□□ -0.33
RTN3P1-201ENST00000536295 CCL27Q9Y4X3 112 aa13□□□□□ -0.33
RTN3P1-201ENST00000536295 OTOGQ6ZRI0 2925 aa13□□□□□ -0.33
RTN3P1-201ENST00000536295 ARHGAP21Q5T5U3 1957 aa13□□□□□ -0.33
RTN3P1-201ENST00000536295 AKAP9Q99996 3911 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 A0A087WV62 115 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 H0Y3Z8 333 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 UPK1AO00322 258 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 AKAP10O43572 662 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 TRIM13O60858 407 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 LINC00032P0C843 101 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 CYP4B1P13584 511 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 GRK2P25098 689 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 RFX3P48380 749 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 STARP49675 285 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 ZNF136P52737 540 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 VSNL1P62760 191 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 PSPHP78330 225 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 IFFO1Q0D2I5 559 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 HSPB3Q12988 150 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 RCAN2Q14206 197 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 KIAA0040Q15053 153 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 PLXDC2Q6UX71 529 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 IKBIPQ70UQ0 350 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 IFNEQ86WN2 208 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 ZZZ3Q8IYH5 903 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 OR2T11Q8NH01 316 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 CLHC1Q8NHS4 586 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 FAM111AQ96PZ2 611 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 TUBA1CQ9BQE3 449 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 MECRQ9BV79 373 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 TUBB1Q9H4B7 451 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 SLC24A3Q9HC58 644 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 TAS2R7Q9NYW3 318 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 SLC17A7Q9P2U7 560 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 C19orf53Q9UNZ5 99 aaPredicted RBP12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 RPH3AQ9Y2J0 694 aaPredicted RBP12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 WBP11Q9Y2W2 641 aaKnown RBP12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 TACC2O95359 2948 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 POLQO75417 2590 aa12.99□□□□□ -0.33
RTN3P1-201ENST00000536295 KIAA1549Q9HCM3 1950 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 CD8B2A6NJW9 211 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 TMEM233B4DJY2 109 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 PLOD2O00469 737 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 PDPK1O15530 556 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 SPAG7O75391 227 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 SLITRK5O94991 958 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 CHEK2O96017 543 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 CHRNGP07510 517 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 PRPH2P23942 346 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 ALDH3A1P30838 453 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 SRD5A2P31213 254 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 EVI2BP34910 448 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 GPC1P35052 558 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 KIR2DL3P43628 341 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 ASCL1P50553 236 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 RPL38P63173 70 aaKnown RBP12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 MRPS22P82650 360 aaKnown RBP12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 STX5Q13190 355 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 GAB1Q13480 694 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 ZNHIT3Q15649 155 aaPredicted RBP12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 GALNTL6Q49A17 601 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 KANK2Q63ZY3 851 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 ENPP6Q6UWR7 440 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 Q6ZSR9 355 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 ZNF551Q7Z340 670 aaPredicted RBP12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 TRABD2AQ86V40 505 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 DDIASQ8IXT1 998 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 OR2L13Q8N349 312 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 BANPQ8N9N5 519 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 C9orf106Q8NAJ2 232 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 OR4K17Q8NGC6 315 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 AGR3Q8TD06 166 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 CIDECQ96AQ7 238 aaPredicted RBP12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 ELP4Q96EB1 424 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 LRRC46Q96FV0 321 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 SFXN2Q96NB2 322 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 TSSK3Q96PN8 268 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 CALHM2Q9HA72 323 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 EQTNQ9NQ60 294 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 FLRT3Q9NZU0 649 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 PPP4R1LQ9P1A2 415 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 ZNF629Q9UEG4 869 aaPredicted RBP12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 BAIAP2L1Q9UHR4 511 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 CBLCQ9ULV8 474 aa12.98□□□□□ -0.33
RTN3P1-201ENST00000536295 MBD3L4A6NDZ8 208 aaPredicted RBP12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 MBD3L3A6NE82 208 aaPredicted RBP12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 MBD3L5A6NJ08 208 aaPredicted RBP12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 B4DXG7 233 aa12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 EEF1E1-BLOC1S5C9J1V9 151 aa12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 SYT5O00445 386 aa12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 EEF1E1O43324 174 aaKnown RBP12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 NEFHP12036 1026 aa12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 CPN1P15169 458 aa12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 SDC1P18827 310 aa12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 POU3F2P20265 443 aaPredicted RBP12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 CTSSP25774 331 aa12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 DPP4P27487 766 aa12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 DGKQP52824 942 aa12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 GAS1P54826 345 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms