RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 SLC35C2Q9NQQ7 365 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 TAS2R7Q9NYW3 318 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 ZNF629Q9UEG4 869 aaPredicted RBP9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 SLC6A5Q9Y345 797 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 MRPS18CQ9Y3D5 142 aaKnown RBP9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 CCL27Q9Y4X3 112 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 ARID1AO14497 2285 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 C2orf72A6NCS6 295 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 MBD3L4A6NDZ8 208 aaPredicted RBP9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 MBD3L3A6NE82 208 aaPredicted RBP9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 MBD3L5A6NJ08 208 aaPredicted RBP9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 MYO1GB0I1T2 1018 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 NPIPB8E9PQR5 432 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 ABCB7O75027 752 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 GLRA3O75311 464 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 CBR3O75828 277 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 CPN1P15169 458 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 DDCP20711 480 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 CRHR1P34998 444 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 PEX19P40855 299 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 MASP1P48740 699 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 ZNF136P52737 540 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 GFRA1P56159 465 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 ACSM2AQ08AH3 577 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 PLCXD2Q0VAA5 305 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 KIAA0040Q15053 153 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 WIPI1Q5MNZ9 446 aaPredicted RBP9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 ACSM2BQ68CK6 577 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 FAM71E1Q6IPT2 247 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 SCIMPQ6UWF3 145 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 ANGPTL8Q6UXH0 198 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 FRMD7Q6ZUT3 714 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 P3H2Q8IVL5 708 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 PHC2Q8IXK0 858 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 OR7G2Q8NG99 324 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 OR9A2Q8NGT5 310 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 MBD3L2Q8NHZ7 208 aaPredicted RBP9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 FAM76AQ8TAV0 307 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 ZPLD1Q8TCW7 415 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 KAT2AQ92830 837 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 ABTB1Q969K4 478 aaPredicted RBP9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 TMBIM1Q969X1 311 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 EXOSC8Q96B26 276 aaKnown RBP9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 CCDC126Q96EE4 140 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 UCN2Q96RP3 112 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 OR2B2Q9GZK3 357 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 METTL7AQ9H8H3 244 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 FOLH1BQ9HBA9 442 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 MID1IP1Q9NPA3 183 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 BEX4Q9NWD9 120 aaPredicted RBP9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 JKAMPQ9P055 326 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 TBK1Q9UHD2 729 aa9.15□□□□□ -0.94
CLSTN3-203ENST00000534830 CHD3Q12873 2000 aaKnown RBP9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 A0A087WV62 115 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 GNG14A0A1W2PPG7 69 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 CCDC151A5D8V7 595 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 PRAMEF25A6NGN4 478 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 H3BQF6 201 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 PLOD2O00469 737 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 PLIN3O60664 434 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 NME6O75414 186 aaPredicted RBP9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 ERN1O75460 977 aaKnown RBP9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 PSMG1O95456 288 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 ACTL6AO96019 429 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 ANXA4P09525 319 aaPredicted RBP9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 MYL2P10916 166 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 PRPH2P23942 346 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 MPIP34949 423 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 SLCO1A2P46721 670 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 PNLIPRP2P54317 469 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 WNT3P56703 355 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 CORO7P57737 925 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 PSPHP78330 225 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 PSG6Q00889 435 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 SLC18A2Q05940 514 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 BTKQ06187 659 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 ZNF763Q0D2J5 394 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 SF3B4Q15427 424 aaKnown RBP eCLIP9.14□□□□□ -0.953e-6■■■■□ 20.8
CLSTN3-203ENST00000534830 CCDC153Q494R4 210 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 Q5PR19 223 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 RNF165Q6ZSG1 346 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 YRDCQ86U90 279 aaKnown RBP9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 GSPT2Q8IYD1 628 aaKnown RBP9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 TMCO6Q96DC7 493 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 METTL2AQ96IZ6 378 aaKnown RBP9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 COL21A1Q96P44 957 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 G6PC3Q9BUM1 346 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 EBPLQ9BY08 206 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 STMN4Q9H169 189 aaPredicted RBP9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 PLEKHF2Q9H8W4 249 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 OXSMQ9NWU1 459 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 KLRF1Q9NZS2 232 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 GRID1Q9ULK0 1009 aa9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 WBP11Q9Y2W2 641 aaKnown RBP9.14□□□□□ -0.95
CLSTN3-203ENST00000534830 MXRA5Q9NR99 2828 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 NUP214P35658 2090 aaPredicted RBP9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 DVL2O14641 736 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 ZIC3O60481 467 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 REM1O75628 298 aa9.13□□□□□ -0.95
CLSTN3-203ENST00000534830 RSL1D1O76021 490 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms