RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 PLEKP08567 350 aaPredicted RBP0.18□□□□□ -2.38
COPB1-212ENST00000534771 P0C880 135 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 COL8A2P25067 703 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 PTBP1P26599 531 aaKnown RBP eCLIP0.18□□□□□ -2.38
COPB1-212ENST00000534771 NTSP30990 170 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 OR1D2P34982 312 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 TRIM23P36406 574 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 NNMTP40261 264 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 MTTPP55157 894 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 HAND2P61296 217 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 ZNF85Q03923 595 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 MEF2CQ06413 473 aaPredicted RBP0.18□□□□□ -2.38
COPB1-212ENST00000534771 KCNJ11Q14654 390 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 DNAJC21Q5F1R6 531 aaKnown RBP0.18□□□□□ -2.38
COPB1-212ENST00000534771 TCHHL1Q5QJ38 904 aaPredicted RBP0.18□□□□□ -2.38
COPB1-212ENST00000534771 RABGAP1LQ5R372 815 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 HYIQ5T013 277 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 TXNRD3NBQ6F5E7 133 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 PRR5LQ6MZQ0 368 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 NANOGP8Q6NSW7 305 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 CCDC70Q6NSX1 233 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 SASS6Q6UVJ0 657 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 DNM1P46Q6ZS02 220 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 SPATA21Q7Z572 469 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 CREBRFQ8IUR6 639 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 TMEM252Q8N6L7 170 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 SPATA18Q8TC71 538 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 DNAJA4Q8WW22 397 aaPredicted RBP0.18□□□□□ -2.38
COPB1-212ENST00000534771 CKAP2Q8WWK9 683 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 GIMAP1Q8WWP7 306 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 TMEM158Q8WZ71 300 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 RIT1Q92963 219 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 DNAJA3Q96EY1 480 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 C5orf30Q96GV9 206 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 S1PR3Q99500 378 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 ARHGDIGQ99819 225 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 AGPAT1Q99943 283 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 ZNF559Q9BR84 538 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 HDHD3Q9BSH5 251 aaPredicted RBP0.18□□□□□ -2.38
COPB1-212ENST00000534771 TM2D1Q9BX74 207 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 ZNF350Q9GZX5 532 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 TSPY26PQ9H489 355 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 ZDHHC11Q9H8X9 412 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 GORASP2Q9H8Y8 452 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 NRN1Q9NPD7 142 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 GPR173Q9NS66 373 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 SAMSN1Q9NSI8 373 aaKnown RBP0.18□□□□□ -2.38
COPB1-212ENST00000534771 SOHLH2Q9NX45 425 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 MIS18AQ9NYP9 233 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 WDR35Q9P2L0 1181 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 CHORDC1Q9UHD1 332 aaPredicted RBP0.18□□□□□ -2.38
COPB1-212ENST00000534771 NUFIP1Q9UHK0 495 aaKnown RBP0.18□□□□□ -2.38
COPB1-212ENST00000534771 RPS6KA6Q9UK32 745 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 ERVK-19Q9WJR5 959 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 YTHDF2Q9Y5A9 579 aaKnown RBP0.18□□□□□ -2.38
COPB1-212ENST00000534771 LIPGQ9Y5X9 500 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 FAM169AQ9Y6X4 670 aa0.18□□□□□ -2.38
COPB1-212ENST00000534771 COL5A3P25940 1745 aaPredicted RBP0.18□□□□□ -2.38
COPB1-212ENST00000534771 KIF7Q2M1P5 1343 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 IGLV1-50A0A075B6I6 118 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 TRBV7-9A0A0J9YWB2 115 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 C7orf66A4D0T2 115 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 E9PLD3 99 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 CCDC188H7C350 402 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 RANBP6O60518 1105 aaKnown RBP0.17□□□□□ -2.38
COPB1-212ENST00000534771 SLITRK3O94933 977 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 PGM3O95394 542 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 ECDO95905 644 aaPredicted RBP0.17□□□□□ -2.38
COPB1-212ENST00000534771 MYBL1P10243 752 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 SDC1P18827 310 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 CAPN3P20807 821 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 VDAC1P21796 283 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 CPT2P23786 658 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 OTX2P32243 289 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 ACTN2P35609 894 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 TKTL1P51854 596 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 RAG2P55895 527 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 KRTAP12-1P59990 96 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 PTENP60484 403 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 KLHL30Q0D2K2 578 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 HSPA14Q0VDF9 509 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 GK2Q14410 553 aaPredicted RBP0.17□□□□□ -2.38
COPB1-212ENST00000534771 SMC1AQ14683 1233 aaKnown RBP0.17□□□□□ -2.38
COPB1-212ENST00000534771 HEPACAMQ14CZ8 416 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 NSDHLQ15738 373 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 IGFBP7Q16270 282 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 AANATQ16613 207 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 CDO1Q16878 200 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 NCR3LG1Q68D85 454 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 ZNF57Q68EA5 555 aaPredicted RBP0.17□□□□□ -2.38
COPB1-212ENST00000534771 GPR139Q6DWJ6 353 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 ZNF880Q6PDB4 577 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 ATRAIDQ6UW56 229 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 PPP1R21Q6ZMI0 780 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 SHISA6Q6ZSJ9 500 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 PIWIL3Q7Z3Z3 882 aaKnown RBP0.17□□□□□ -2.38
COPB1-212ENST00000534771 C6orf120Q7Z4R8 191 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 MAATS1Q7Z4T9 603 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 HSD11B1LQ7Z5J1 315 aa0.17□□□□□ -2.38
COPB1-212ENST00000534771 ADCK2Q7Z695 626 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms