RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 OR7G3Q8NG95 312 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 OR5AP2Q8NGF4 316 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 OR5M8Q8NGP6 311 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 OR52N5Q8NH56 324 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 C9orf43Q8TAL5 461 aaPredicted RBP3.01□□□□□ -1.93
USP48-215ENST00000534705 PHLDA1Q8WV24 401 aaPredicted RBP3.01□□□□□ -1.93
USP48-215ENST00000534705 RAD54LQ92698 747 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 PRCCQ92733 491 aaPredicted RBP3.01□□□□□ -1.93
USP48-215ENST00000534705 EFHD2Q96C19 240 aaPredicted RBP3.01□□□□□ -1.93
USP48-215ENST00000534705 LRRC45Q96CN5 670 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 SPACA9Q96E40 222 aaPredicted RBP3.01□□□□□ -1.93
USP48-215ENST00000534705 CHMP6Q96FZ7 201 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 ZNF599Q96NL3 588 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 XPO6Q96QU8 1125 aaKnown RBP3.01□□□□□ -1.93
USP48-215ENST00000534705 INTS14Q96SY0 518 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 TRIM51Q9BSJ1 452 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 INPP5KQ9BT40 448 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 TMEM109Q9BVC6 243 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 OSBPL10Q9BXB5 764 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 FGFBP2Q9BYJ0 223 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 RAB34Q9BZG1 259 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 RAB17Q9H0T7 212 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 ZBP1Q9H171 429 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 UBE2ZQ9H832 354 aaPredicted RBP3.01□□□□□ -1.93
USP48-215ENST00000534705 CNOT10Q9H9A5 744 aaKnown RBP3.01□□□□□ -1.93
USP48-215ENST00000534705 VPS37BQ9H9H4 285 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 SERINC1Q9NRX5 453 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 IARS2Q9NSE4 1012 aaKnown RBP3.01□□□□□ -1.93
USP48-215ENST00000534705 EXOC1Q9NV70 894 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 INTS9Q9NV88 658 aaKnown RBP3.01□□□□□ -1.93
USP48-215ENST00000534705 PRMT7Q9NVM4 692 aaPredicted RBP3.01□□□□□ -1.93
USP48-215ENST00000534705 HAO2Q9NYQ3 351 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 CNIH4Q9P003 139 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 SEPT10Q9P0V9 454 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 KLHL8Q9P2G9 620 aaPredicted RBP3.01□□□□□ -1.93
USP48-215ENST00000534705 B3GAT1Q9P2W7 334 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 CRNNQ9UBG3 495 aaPredicted RBP3.01□□□□□ -1.93
USP48-215ENST00000534705 RNF14Q9UBS8 474 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 ZMAT5Q9UDW3 170 aaKnown RBP3.01□□□□□ -1.93
USP48-215ENST00000534705 LAMP5Q9UJQ1 280 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 ITGA11Q9UKX5 1188 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 RPH3AQ9Y2J0 694 aaPredicted RBP3.01□□□□□ -1.93
USP48-215ENST00000534705 SAR1BQ9Y6B6 198 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.01□□□□□ -1.93
USP48-215ENST00000534705 F5P12259 2224 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 ANKRD36A6QL64 1941 aa3.01□□□□□ -1.93
USP48-215ENST00000534705 MUC6Q6W4X9 2439 aa3□□□□□ -1.93
USP48-215ENST00000534705 THADAQ6YHU6 1953 aa3□□□□□ -1.93
USP48-215ENST00000534705 ADAMTS9Q9P2N4 1935 aa3□□□□□ -1.93
USP48-215ENST00000534705 LOC105371267A0A1B0GV96 52 aa3□□□□□ -1.93
USP48-215ENST00000534705 SH3PXD2BA1X283 911 aa3□□□□□ -1.93
USP48-215ENST00000534705 GPR89AB7ZAQ6 455 aa3□□□□□ -1.93
USP48-215ENST00000534705 ANKRD63C9JTQ0 380 aa3□□□□□ -1.93
USP48-215ENST00000534705 UBXN8O00124 270 aa3□□□□□ -1.93
USP48-215ENST00000534705 KMOO15229 486 aa3□□□□□ -1.93
USP48-215ENST00000534705 SLC16A4O15374 487 aa3□□□□□ -1.93
USP48-215ENST00000534705 RIPK2O43353 540 aa3□□□□□ -1.93
USP48-215ENST00000534705 MBTPS2O43462 519 aa3□□□□□ -1.93
USP48-215ENST00000534705 KLRC4O43908 158 aa3□□□□□ -1.93
USP48-215ENST00000534705 SLCO2B1O94956 709 aa3□□□□□ -1.93
USP48-215ENST00000534705 IFNB1P01574 187 aa3□□□□□ -1.93
USP48-215ENST00000534705 KRT14P02533 472 aa3□□□□□ -1.93
USP48-215ENST00000534705 GYPCP04921 128 aa3□□□□□ -1.93
USP48-215ENST00000534705 GPR89BP0CG08 455 aa3□□□□□ -1.93
USP48-215ENST00000534705 GSTT2P0CG29 244 aa3□□□□□ -1.93
USP48-215ENST00000534705 GSTT2BP0CG30 244 aa3□□□□□ -1.93
USP48-215ENST00000534705 POLR2EP19388 210 aaKnown RBP3□□□□□ -1.93
USP48-215ENST00000534705 ACHEP22303 614 aa3□□□□□ -1.93
USP48-215ENST00000534705 NMT1P30419 496 aaKnown RBP3□□□□□ -1.93
USP48-215ENST00000534705 HNRNPH3P31942 346 aaKnown RBP3□□□□□ -1.93
USP48-215ENST00000534705 S100A5P33763 92 aa3□□□□□ -1.93
USP48-215ENST00000534705 TNFSF9P41273 254 aa3□□□□□ -1.93
USP48-215ENST00000534705 ACADSBP45954 432 aa3□□□□□ -1.93
USP48-215ENST00000534705 CAMLGP49069 296 aa3□□□□□ -1.93
USP48-215ENST00000534705 SULT1E1P49888 294 aa3□□□□□ -1.93
USP48-215ENST00000534705 HNMTP50135 292 aa3□□□□□ -1.93
USP48-215ENST00000534705 NDUFA8P51970 172 aa3□□□□□ -1.93
USP48-215ENST00000534705 MAZP56270 477 aaKnown RBP3□□□□□ -1.93
USP48-215ENST00000534705 SNRPD1P62314 119 aaKnown RBP3□□□□□ -1.93
USP48-215ENST00000534705 MAT1AQ00266 395 aaKnown RBP3□□□□□ -1.93
USP48-215ENST00000534705 GTF2BQ00403 316 aa3□□□□□ -1.93
USP48-215ENST00000534705 RELAQ04206 551 aa3□□□□□ -1.93
USP48-215ENST00000534705 COX10Q12887 443 aa3□□□□□ -1.93
USP48-215ENST00000534705 MSLNQ13421 630 aaPredicted RBP3□□□□□ -1.93
USP48-215ENST00000534705 GAMTQ14353 236 aa3□□□□□ -1.93
USP48-215ENST00000534705 RCN1Q15293 331 aa3□□□□□ -1.93
USP48-215ENST00000534705 ZBTB6Q15916 424 aa3□□□□□ -1.93
USP48-215ENST00000534705 TAZQ16635 292 aa3□□□□□ -1.93
USP48-215ENST00000534705 MAPK6Q16659 721 aa3□□□□□ -1.93
USP48-215ENST00000534705 ITPRIPL2Q3MIP1 535 aa3□□□□□ -1.93
USP48-215ENST00000534705 C6orf136Q5SQH8 315 aa3□□□□□ -1.93
USP48-215ENST00000534705 ATF7IP2Q5U623 682 aa3□□□□□ -1.93
USP48-215ENST00000534705 PLPP4Q5VZY2 271 aa3□□□□□ -1.93
USP48-215ENST00000534705 FAM91A1Q658Y4 838 aa3□□□□□ -1.93
USP48-215ENST00000534705 ZNF613Q6PF04 617 aa3□□□□□ -1.93
USP48-215ENST00000534705 BHLHB9Q6PI77 547 aa3□□□□□ -1.93
USP48-215ENST00000534705 TMEM184AQ6ZMB5 413 aa3□□□□□ -1.93
USP48-215ENST00000534705 KCTD9Q7L273 389 aa3□□□□□ -1.93
USP48-215ENST00000534705 NANOGNBQ7Z5D8 188 aa3□□□□□ -1.93
USP48-215ENST00000534705 GPBP1Q86WP2 473 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms