RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 A0A1W2PQL4 384 aaPredicted RBP11.71□□□□□ -0.53
RAD50-209ENST00000533482 OR5K4A6NMS3 321 aa11.71□□□□□ -0.53
RAD50-209ENST00000533482 FAM171A2A8MVW0 826 aa11.71□□□□□ -0.53
RAD50-209ENST00000533482 SMAD9O15198 467 aaKnown RBP11.71□□□□□ -0.53
RAD50-209ENST00000533482 CDK1P06493 297 aa11.71□□□□□ -0.53
RAD50-209ENST00000533482 FURINP09958 794 aa11.71□□□□□ -0.53
RAD50-209ENST00000533482 GPX2P18283 190 aa11.71□□□□□ -0.53
RAD50-209ENST00000533482 HIST1H1TP22492 207 aaPredicted RBP11.71□□□□□ -0.53
RAD50-209ENST00000533482 RGS6P49758 472 aa11.71□□□□□ -0.53
RAD50-209ENST00000533482 ZNF683Q8IZ20 524 aa11.71□□□□□ -0.53
RAD50-209ENST00000533482 Q8N402 240 aa11.71□□□□□ -0.53
RAD50-209ENST00000533482 TMEM156Q8N614 296 aa11.71□□□□□ -0.53
RAD50-209ENST00000533482 ZNF527Q8NB42 609 aa11.71□□□□□ -0.53
RAD50-209ENST00000533482 RIT1Q92963 219 aa11.71□□□□□ -0.53
RAD50-209ENST00000533482 MCCC1Q96RQ3 725 aaPredicted RBP11.71□□□□□ -0.53
RAD50-209ENST00000533482 FGF22Q9HCT0 170 aa11.71□□□□□ -0.53
RAD50-209ENST00000533482 PCDHGB6Q9Y5F9 930 aa11.71□□□□□ -0.53
RAD50-209ENST00000533482 LRRC37AA6NMS7 1700 aa11.71□□□□□ -0.53
RAD50-209ENST00000533482 WWP2O00308 870 aa11.71□□□□□ -0.53
RAD50-209ENST00000533482 FZD6O60353 706 aa11.71□□□□□ -0.53
RAD50-209ENST00000533482 ETHE1O95571 254 aa11.71□□□□□ -0.53
RAD50-209ENST00000533482 PROS1P07225 676 aa11.71□□□□□ -0.53
RAD50-209ENST00000533482 DNASE1L1P49184 302 aa11.71□□□□□ -0.53
RAD50-209ENST00000533482 NSDHLQ15738 373 aa11.71□□□□□ -0.53
RAD50-209ENST00000533482 RPE65Q16518 533 aa11.71□□□□□ -0.53
RAD50-209ENST00000533482 DUSP7Q16829 419 aa11.71□□□□□ -0.53
RAD50-209ENST00000533482 SOWAHCQ53LP3 525 aaPredicted RBP11.71□□□□□ -0.53
RAD50-209ENST00000533482 OR2G6Q5TZ20 316 aa11.71□□□□□ -0.53
RAD50-209ENST00000533482 FAM43BQ6ZT52 329 aaPredicted RBP11.71□□□□□ -0.53
RAD50-209ENST00000533482 NUP54Q7Z3B4 507 aa11.71□□□□□ -0.53
RAD50-209ENST00000533482 PRR22Q8IZ63 422 aa11.71□□□□□ -0.53
RAD50-209ENST00000533482 OR2L5Q8NG80 312 aa11.71□□□□□ -0.53
RAD50-209ENST00000533482 PDXPQ96GD0 296 aa11.71□□□□□ -0.53
RAD50-209ENST00000533482 C8orf33Q9H7E9 229 aaPredicted RBP11.71□□□□□ -0.53
RAD50-209ENST00000533482 RLIMQ9NVW2 624 aa11.71□□□□□ -0.53
RAD50-209ENST00000533482 COMMD9Q9P000 198 aa11.71□□□□□ -0.53
RAD50-209ENST00000533482 HSPB11Q9Y547 144 aa11.71□□□□□ -0.53
RAD50-209ENST00000533482 SOX1O00570 391 aaPredicted RBP11.71□□□□□ -0.54
RAD50-209ENST00000533482 EIF1AYO14602 144 aaKnown RBP11.71□□□□□ -0.54
RAD50-209ENST00000533482 LINC01565O15544 149 aa11.71□□□□□ -0.54
RAD50-209ENST00000533482 PTHP01270 115 aa11.71□□□□□ -0.54
RAD50-209ENST00000533482 CTSLP07711 333 aa11.71□□□□□ -0.54
RAD50-209ENST00000533482 ZNF823P16415 610 aa11.71□□□□□ -0.54
RAD50-209ENST00000533482 S100A1P23297 94 aa11.71□□□□□ -0.54
RAD50-209ENST00000533482 CTHP32929 405 aa11.71□□□□□ -0.54
RAD50-209ENST00000533482 CTU2Q2VPK5 515 aaKnown RBP11.71□□□□□ -0.54
RAD50-209ENST00000533482 TMEM179BQ7Z7N9 219 aa11.71□□□□□ -0.54
RAD50-209ENST00000533482 SLC37A3Q8NCC5 494 aa11.71□□□□□ -0.54
RAD50-209ENST00000533482 OR5K2Q8NHB8 316 aa11.71□□□□□ -0.54
RAD50-209ENST00000533482 ZDHHC12Q96GR4 267 aa11.71□□□□□ -0.54
RAD50-209ENST00000533482 CDCA3Q99618 268 aaPredicted RBP11.71□□□□□ -0.54
RAD50-209ENST00000533482 MKRN2Q9H000 416 aaKnown RBP11.71□□□□□ -0.54
RAD50-209ENST00000533482 COMMD4Q9H0A8 199 aa11.71□□□□□ -0.54
RAD50-209ENST00000533482 NDUFAF4Q9P032 175 aa11.71□□□□□ -0.54
RAD50-209ENST00000533482 CACNA1EQ15878 2313 aa11.71□□□□□ -0.54
RAD50-209ENST00000533482 GFRA2O00451 464 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 OXSR1O95747 527 aaPredicted RBP11.7□□□□□ -0.54
RAD50-209ENST00000533482 ARAFP10398 606 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 ITGAMP11215 1152 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 SLC6A6P31641 620 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 CHRNEQ04844 493 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 WDR45BQ5MNZ6 344 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 RBM45Q8IUH3 476 aaKnown RBP11.7□□□□□ -0.54
RAD50-209ENST00000533482 ADAMTS16Q8TE57 1224 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 EFHD2Q96C19 240 aaPredicted RBP11.7□□□□□ -0.54
RAD50-209ENST00000533482 MYADMQ96S97 322 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 GINS4Q9BRT9 223 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 RHNO1Q9BSD3 238 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 CPNE7Q9UBL6 633 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 A0A1W2PRQ8 180 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 ASPDHA6ND91 283 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 UNC119BA6NIH7 251 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 C12orf71A8MTZ7 269 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 CDC40O60508 579 aaKnown RBP eCLIP11.7□□□□□ -0.54
RAD50-209ENST00000533482 GYPBP06028 91 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 NKX3-2P78367 333 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 PIP5KL1Q5T9C9 394 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 C18orf63Q68DL7 685 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 SLC44A3Q8N4M1 653 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 VN1R2Q8NFZ6 395 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 SLC41A3Q96GZ6 507 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 PELI2Q9HAT8 420 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 KLK8O60259 260 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 RENP00797 406 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 EGFP01133 1207 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 RABIFP47224 123 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 CSNK1EP49674 416 aaKnown RBP11.7□□□□□ -0.54
RAD50-209ENST00000533482 ISL1P61371 349 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 HNRNPKP61978 463 aaKnown RBP eCLIP11.7□□□□□ -0.54
RAD50-209ENST00000533482 ADAM15Q13444 863 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 Q6ZNB5 142 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 OR52E2Q8NGJ4 325 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 OR9A4Q8NGU2 314 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 MOAP1Q96BY2 351 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 RPP25Q9BUL9 199 aaKnown RBP11.7□□□□□ -0.54
RAD50-209ENST00000533482 C1QTNF3Q9BXJ4 246 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 ACTRT3Q9BYD9 372 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 NLKQ9UBE8 527 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 HCN2Q9UL51 889 aa11.7□□□□□ -0.54
RAD50-209ENST00000533482 ATXN7L1Q9ULK2 861 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms