RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 DUSP3P51452 185 aaPredicted RBP16.59■□□□□ 0.25
PHRF1-205ENST00000533464 PPP5CP53041 499 aa16.59■□□□□ 0.25
PHRF1-205ENST00000533464 GNG2P59768 71 aa16.59■□□□□ 0.25
PHRF1-205ENST00000533464 RSPO2Q6UXX9 243 aaPredicted RBP16.59■□□□□ 0.25
PHRF1-205ENST00000533464 LILRA2Q8N149 483 aa16.59■□□□□ 0.25
PHRF1-205ENST00000533464 MS4A15Q8N5U1 240 aa16.59■□□□□ 0.25
PHRF1-205ENST00000533464 ZNF583Q96ND8 569 aa16.59■□□□□ 0.25
PHRF1-205ENST00000533464 SCGB3A2Q96PL1 93 aa16.59■□□□□ 0.25
PHRF1-205ENST00000533464 KCMF1Q9P0J7 381 aa16.59■□□□□ 0.25
PHRF1-205ENST00000533464 C7orf72A4D263 438 aa16.59■□□□□ 0.25
PHRF1-205ENST00000533464 LDB3O75112 727 aa16.59■□□□□ 0.25
PHRF1-205ENST00000533464 PRH1P02810 166 aa16.59■□□□□ 0.25
PHRF1-205ENST00000533464 AKR1D1P51857 326 aa16.59■□□□□ 0.25
PHRF1-205ENST00000533464 VWA5B2Q8N398 1253 aa16.59■□□□□ 0.25
PHRF1-205ENST00000533464 ZNF431Q8TF32 576 aaPredicted RBP16.59■□□□□ 0.25
PHRF1-205ENST00000533464 WDR77Q9BQA1 342 aaPredicted RBP16.59■□□□□ 0.25
PHRF1-205ENST00000533464 KATNBL1Q9H079 304 aa16.59■□□□□ 0.25
PHRF1-205ENST00000533464 BAIAP2Q9UQB8 552 aa16.59■□□□□ 0.25
PHRF1-205ENST00000533464 HTR3EA5X5Y0 456 aa16.59■□□□□ 0.25
PHRF1-205ENST00000533464 SGK494L7N484 410 aa16.59■□□□□ 0.25
PHRF1-205ENST00000533464 CASC3O15234 703 aaKnown RBP16.59■□□□□ 0.25
PHRF1-205ENST00000533464 ITGBL1O95965 494 aaPredicted RBP16.59■□□□□ 0.25
PHRF1-205ENST00000533464 IFNA7P01567 189 aa16.59■□□□□ 0.25
PHRF1-205ENST00000533464 GSTT2P0CG29 244 aa16.59■□□□□ 0.25
PHRF1-205ENST00000533464 GGTA1PQ4G0N0 100 aa16.59■□□□□ 0.25
PHRF1-205ENST00000533464 TMEM207Q6UWW9 146 aa16.59■□□□□ 0.25
PHRF1-205ENST00000533464 WDR53Q7Z5U6 358 aaPredicted RBP16.59■□□□□ 0.25
PHRF1-205ENST00000533464 ABCG5Q9H222 651 aa16.59■□□□□ 0.25
PHRF1-205ENST00000533464 SUSD2Q9UGT4 822 aa16.59■□□□□ 0.25
PHRF1-205ENST00000533464 SCP2D1Q9UJQ7 156 aa16.59■□□□□ 0.25
PHRF1-205ENST00000533464 CSNK1G3Q9Y6M4 447 aa16.59■□□□□ 0.25
PHRF1-205ENST00000533464 H0YIV9 168 aa16.58■□□□□ 0.25
PHRF1-205ENST00000533464 RGS9O75916 674 aaPredicted RBP16.58■□□□□ 0.25
PHRF1-205ENST00000533464 RPL34P49207 117 aaKnown RBP16.58■□□□□ 0.25
PHRF1-205ENST00000533464 SGCAQ16586 387 aa16.58■□□□□ 0.25
PHRF1-205ENST00000533464 TMEM69Q5SWH9 247 aa16.58■□□□□ 0.25
PHRF1-205ENST00000533464 NXPE2Q96DL1 559 aa16.58■□□□□ 0.25
PHRF1-205ENST00000533464 RARRES3Q9UL19 164 aa16.58■□□□□ 0.25
PHRF1-205ENST00000533464 CLEC4EQ9ULY5 219 aa16.58■□□□□ 0.25
PHRF1-205ENST00000533464 C17orf113A0A1B0GUU1 675 aa16.58■□□□□ 0.24
PHRF1-205ENST00000533464 WASHC1A8K0Z3 465 aa16.58■□□□□ 0.24
PHRF1-205ENST00000533464 MAGEA12P43365 314 aa16.58■□□□□ 0.24
PHRF1-205ENST00000533464 PDX1P52945 283 aa16.58■□□□□ 0.24
PHRF1-205ENST00000533464 WASH2PQ6VEQ5 465 aa16.58■□□□□ 0.24
PHRF1-205ENST00000533464 PIWIL3Q7Z3Z3 882 aaKnown RBP16.58■□□□□ 0.24
PHRF1-205ENST00000533464 CPPED1Q9BRF8 314 aaPredicted RBP16.58■□□□□ 0.24
PHRF1-205ENST00000533464 TIMM29Q9BSF4 260 aa16.58■□□□□ 0.24
PHRF1-205ENST00000533464 ZBP1Q9H171 429 aa16.58■□□□□ 0.24
PHRF1-205ENST00000533464 MYO5AQ9Y4I1 1855 aaKnown RBP16.58■□□□□ 0.24
PHRF1-205ENST00000533464 NPIPA5A0A0B4J1W7 369 aa16.58■□□□□ 0.24
PHRF1-205ENST00000533464 PRSS38A1L453 326 aa16.58■□□□□ 0.24
PHRF1-205ENST00000533464 C12orf71A8MTZ7 269 aa16.58■□□□□ 0.24
PHRF1-205ENST00000533464 NPIPA7E9PJI5 369 aa16.58■□□□□ 0.24
PHRF1-205ENST00000533464 NPIPA8P0DM63 369 aa16.58■□□□□ 0.24
PHRF1-205ENST00000533464 PVRP15151 417 aa16.58■□□□□ 0.24
PHRF1-205ENST00000533464 CTXN1P60606 82 aa16.58■□□□□ 0.24
PHRF1-205ENST00000533464 PLAG1Q6DJT9 500 aa16.58■□□□□ 0.24
PHRF1-205ENST00000533464 VRK3Q8IV63 474 aa16.58■□□□□ 0.24
PHRF1-205ENST00000533464 LMAN1LQ9HAT1 526 aa16.58■□□□□ 0.24
PHRF1-205ENST00000533464 KLF15Q9UIH9 416 aa16.58■□□□□ 0.24
PHRF1-205ENST00000533464 SH2B3Q9UQQ2 575 aa16.58■□□□□ 0.24
PHRF1-205ENST00000533464 A0A0J9YY10 115 aa16.58■□□□□ 0.24
PHRF1-205ENST00000533464 KANTRA0A1W2PQU2 76 aa16.58■□□□□ 0.24
PHRF1-205ENST00000533464 PCDH17O14917 1159 aa16.58■□□□□ 0.24
PHRF1-205ENST00000533464 RBBP9O75884 186 aa16.58■□□□□ 0.24
PHRF1-205ENST00000533464 PPP1R3DO95685 299 aa16.58■□□□□ 0.24
PHRF1-205ENST00000533464 GKN3PP0CG01 181 aa16.58■□□□□ 0.24
PHRF1-205ENST00000533464 LEG1Q6P5S2 330 aa16.58■□□□□ 0.24
PHRF1-205ENST00000533464 TMEM151BQ8IW70 566 aa16.58■□□□□ 0.24
PHRF1-205ENST00000533464 TOR1AIP2Q8NFQ8 470 aa16.58■□□□□ 0.24
PHRF1-205ENST00000533464 OR5L2Q8NGL0 311 aa16.58■□□□□ 0.24
PHRF1-205ENST00000533464 OR2T4Q8NH00 348 aa16.58■□□□□ 0.24
PHRF1-205ENST00000533464 ARRDC3Q96B67 414 aa16.58■□□□□ 0.24
PHRF1-205ENST00000533464 INSM2Q96T92 566 aaPredicted RBP16.58■□□□□ 0.24
PHRF1-205ENST00000533464 TAP2Q03519 686 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 SLC25A25Q6KCM7 469 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 FOXRED2Q8IWF2 684 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 B3GNT7Q8NFL0 401 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 LPAR4Q99677 370 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 NUDT15Q9NV35 164 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 DHDHQ9UQ10 334 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 FMO6PO60774 539 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 SYPL1Q16563 259 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 CARD17Q5XLA6 110 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 FUNDC1Q8IVP5 155 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 METTL4Q8N3J2 472 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 CHDHQ8NE62 594 aaPredicted RBP16.57■□□□□ 0.24
PHRF1-205ENST00000533464 NDNFQ8TB73 568 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 OR1F2PQ96R84 312 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 LDAHQ9H6V9 325 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 VNN3Q9NY84 501 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 COL22A1Q8NFW1 1626 aaPredicted RBP16.57■□□□□ 0.24
PHRF1-205ENST00000533464 CEBPGP53567 150 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 WNT4P56705 351 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 PSMA6P60900 246 aaKnown RBP16.57■□□□□ 0.24
PHRF1-205ENST00000533464 FCRLBQ6BAA4 426 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 ZNF765Q7L2R6 523 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 TOE1Q96GM8 510 aaKnown RBP16.57■□□□□ 0.24
PHRF1-205ENST00000533464 CCDC115Q96NT0 180 aa16.57■□□□□ 0.24
PHRF1-205ENST00000533464 SLC6A15Q9H2J7 730 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms