RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 UBQLN3Q9H347 655 aa18.72■□□□□ 0.59
CCS-208ENST00000533244 CXorf36Q9H7Y0 433 aa18.72■□□□□ 0.59
CCS-208ENST00000533244 METTL7AQ9H8H3 244 aa18.72■□□□□ 0.59
CCS-208ENST00000533244 NEUROD4Q9HD90 331 aa18.72■□□□□ 0.59
CCS-208ENST00000533244 Q9N2J8 555 aa18.72■□□□□ 0.59
CCS-208ENST00000533244 CBLCQ9ULV8 474 aa18.72■□□□□ 0.59
CCS-208ENST00000533244 OR10H1Q9Y4A9 318 aa18.72■□□□□ 0.59
CCS-208ENST00000533244 LIPGQ9Y5X9 500 aa18.72■□□□□ 0.59
CCS-208ENST00000533244 TRGV8A0A0C4DH27 118 aa18.71■□□□□ 0.59
CCS-208ENST00000533244 GOLGA8QA0A0J9YX86 632 aa18.71■□□□□ 0.59
CCS-208ENST00000533244 GOLGA8OA6NCC3 632 aa18.71■□□□□ 0.59
CCS-208ENST00000533244 PRAMEF25A6NGN4 478 aa18.71■□□□□ 0.59
CCS-208ENST00000533244 GOLGA8NF8WBI6 632 aa18.71■□□□□ 0.59
CCS-208ENST00000533244 ZNHIT1O43257 154 aa18.71■□□□□ 0.59
CCS-208ENST00000533244 CDC40O60508 579 aaKnown RBP eCLIP18.71■□□□□ 0.59
CCS-208ENST00000533244 SCN2BO60939 215 aa18.71■□□□□ 0.59
CCS-208ENST00000533244 DNAJC13O75165 2243 aa18.71■□□□□ 0.59
CCS-208ENST00000533244 C6orf47O95873 294 aa18.71■□□□□ 0.59
CCS-208ENST00000533244 IL12BP29460 328 aa18.71■□□□□ 0.59
CCS-208ENST00000533244 KRT20P35900 424 aa18.71■□□□□ 0.59
CCS-208ENST00000533244 PRR5P85299 388 aa18.71■□□□□ 0.59
CCS-208ENST00000533244 LSM12Q3MHD2 195 aaKnown RBP18.71■□□□□ 0.59
CCS-208ENST00000533244 SLC9B1Q4ZJI4 515 aa18.71■□□□□ 0.59
CCS-208ENST00000533244 ZCCHC12Q6PEW1 402 aa18.71■□□□□ 0.59
CCS-208ENST00000533244 PAOXQ6QHF9 649 aa18.71■□□□□ 0.59
CCS-208ENST00000533244 TRILQ7L0X0 811 aa18.71■□□□□ 0.59
CCS-208ENST00000533244 ACTRT2Q8TDY3 377 aa18.71■□□□□ 0.59
CCS-208ENST00000533244 EFHD2Q96C19 240 aaPredicted RBP18.71■□□□□ 0.59
CCS-208ENST00000533244 TMCO6Q96DC7 493 aa18.71■□□□□ 0.59
CCS-208ENST00000533244 PSMG3-AS1Q96PY0 264 aa18.71■□□□□ 0.59
CCS-208ENST00000533244 DIDO1Q9BTC0 2240 aaKnown RBP18.71■□□□□ 0.59
CCS-208ENST00000533244 SLCO1B3Q9NPD5 702 aa18.71■□□□□ 0.59
CCS-208ENST00000533244 EQTNQ9NQ60 294 aa18.71■□□□□ 0.59
CCS-208ENST00000533244 INTS9Q9NV88 658 aaKnown RBP18.71■□□□□ 0.59
CCS-208ENST00000533244 TINAGQ9UJW2 476 aa18.71■□□□□ 0.59
CCS-208ENST00000533244 GPR45Q9Y5Y3 372 aa18.71■□□□□ 0.59
CCS-208ENST00000533244 RNASET2O00584 256 aaKnown RBP18.7■□□□□ 0.58
CCS-208ENST00000533244 ADAM10O14672 748 aa18.7■□□□□ 0.58
CCS-208ENST00000533244 ICOSLGO75144 302 aa18.7■□□□□ 0.58
CCS-208ENST00000533244 ACP2P11117 423 aa18.7■□□□□ 0.58
CCS-208ENST00000533244 ABOP16442 354 aa18.7■□□□□ 0.58
CCS-208ENST00000533244 PTGS2P35354 604 aa18.7■□□□□ 0.58
CCS-208ENST00000533244 CLNS1AP54105 237 aaKnown RBP18.7■□□□□ 0.58
CCS-208ENST00000533244 PRKAG1P54619 331 aa18.7■□□□□ 0.58
CCS-208ENST00000533244 MRPS22P82650 360 aaKnown RBP18.7■□□□□ 0.58
CCS-208ENST00000533244 SLC10A1Q14973 349 aa18.7■□□□□ 0.58
CCS-208ENST00000533244 DPY19L1Q2PZI1 675 aa18.7■□□□□ 0.58
CCS-208ENST00000533244 VPS26BQ4G0F5 336 aa18.7■□□□□ 0.58
CCS-208ENST00000533244 TIGD3Q6B0B8 471 aa18.7■□□□□ 0.58
CCS-208ENST00000533244 OR4F3Q6IEY1 312 aa18.7■□□□□ 0.58
CCS-208ENST00000533244 PACS2Q86VP3 889 aa18.7■□□□□ 0.58
CCS-208ENST00000533244 FJX1Q86VR8 437 aa18.7■□□□□ 0.58
CCS-208ENST00000533244 FAM57AQ8TBR7 257 aa18.7■□□□□ 0.58
CCS-208ENST00000533244 SFXN5Q8TD22 340 aa18.7■□□□□ 0.58
CCS-208ENST00000533244 JSRP1Q96MG2 331 aaPredicted RBP18.7■□□□□ 0.58
CCS-208ENST00000533244 GALNT9Q9HCQ5 603 aa18.7■□□□□ 0.58
CCS-208ENST00000533244 ACKR4Q9NPB9 350 aa18.7■□□□□ 0.58
CCS-208ENST00000533244 ZCCHC3Q9NUD5 404 aaKnown RBP18.7■□□□□ 0.58
CCS-208ENST00000533244 B4GALT7Q9UBV7 327 aa18.7■□□□□ 0.58
CCS-208ENST00000533244 C15orf41Q9Y2V0 281 aa18.7■□□□□ 0.58
CCS-208ENST00000533244 SPTBN1Q01082 2364 aaKnown RBP18.7■□□□□ 0.58
CCS-208ENST00000533244 NUP214P35658 2090 aaPredicted RBP18.69■□□□□ 0.58
CCS-208ENST00000533244 SNPHO15079 494 aa18.69■□□□□ 0.58
CCS-208ENST00000533244 SUSD5O60279 629 aa18.69■□□□□ 0.58
CCS-208ENST00000533244 HCN1O60741 890 aa18.69■□□□□ 0.58
CCS-208ENST00000533244 PDE9AO76083 593 aa18.69■□□□□ 0.58
CCS-208ENST00000533244 IL33O95760 270 aa18.69■□□□□ 0.58
CCS-208ENST00000533244 CYP4B1P13584 511 aa18.69■□□□□ 0.58
CCS-208ENST00000533244 ELAVL4P26378 380 aaKnown RBP18.69■□□□□ 0.58
CCS-208ENST00000533244 GABRA3P34903 492 aa18.69■□□□□ 0.58
CCS-208ENST00000533244 KIR3DL1P43629 444 aa18.69■□□□□ 0.58
CCS-208ENST00000533244 HBA1P69905 142 aa18.69■□□□□ 0.58
CCS-208ENST00000533244 PHC1P78364 1004 aa18.69■□□□□ 0.58
CCS-208ENST00000533244 DECR1Q16698 335 aa18.69■□□□□ 0.58
CCS-208ENST00000533244 PGS1Q32NB8 556 aa18.69■□□□□ 0.58
CCS-208ENST00000533244 DOLPP1Q86YN1 238 aa18.69■□□□□ 0.58
CCS-208ENST00000533244 SLC16A11Q8NCK7 471 aa18.69■□□□□ 0.58
CCS-208ENST00000533244 CKAP2Q8WWK9 683 aa18.69■□□□□ 0.58
CCS-208ENST00000533244 TEX37Q96LM6 180 aa18.69■□□□□ 0.58
CCS-208ENST00000533244 ACBD3Q9H3P7 528 aa18.69■□□□□ 0.58
CCS-208ENST00000533244 KLRF1Q9NZS2 232 aa18.69■□□□□ 0.58
CCS-208ENST00000533244 HRH3Q9Y5N1 445 aa18.69■□□□□ 0.58
CCS-208ENST00000533244 USH1CQ9Y6N9 552 aa18.69■□□□□ 0.58
CCS-208ENST00000533244 GXYLT2A0PJZ3 443 aa18.68■□□□□ 0.58
CCS-208ENST00000533244 OR14I1A6ND48 311 aa18.68■□□□□ 0.58
CCS-208ENST00000533244 AQP7O14520 342 aa18.68■□□□□ 0.58
CCS-208ENST00000533244 HMGN2P05204 90 aaKnown RBP18.68■□□□□ 0.58
CCS-208ENST00000533244 PTPN6P29350 595 aa18.68■□□□□ 0.58
CCS-208ENST00000533244 MASP1P48740 699 aa18.68■□□□□ 0.58
CCS-208ENST00000533244 CCT3P49368 545 aaKnown RBP18.68■□□□□ 0.58
CCS-208ENST00000533244 GAS1P54826 345 aa18.68■□□□□ 0.58
CCS-208ENST00000533244 CASP6P55212 293 aa18.68■□□□□ 0.58
CCS-208ENST00000533244 PER3P56645 1201 aa18.68■□□□□ 0.58
CCS-208ENST00000533244 DUSP5Q16690 384 aa18.68■□□□□ 0.58
CCS-208ENST00000533244 EPGNQ6UW88 154 aa18.68■□□□□ 0.58
CCS-208ENST00000533244 SZRD1Q7Z422 152 aa18.68■□□□□ 0.58
CCS-208ENST00000533244 CLECL1Q8IZS7 167 aa18.68■□□□□ 0.58
CCS-208ENST00000533244 OR56A1Q8NGH5 318 aa18.68■□□□□ 0.58
CCS-208ENST00000533244 FAM110BQ8TC76 370 aa18.68■□□□□ 0.58
CCS-208ENST00000533244 DYDC1Q8WWB3 177 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms