RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 MAP4K2Q12851 820 aa16.41■□□□□ 0.22
PTPN11-204ENST00000531326 ZNF267Q14586 743 aaPredicted RBP16.41■□□□□ 0.22
PTPN11-204ENST00000531326 ZNF628Q5EBL2 1059 aa16.41■□□□□ 0.22
PTPN11-204ENST00000531326 ZNF585AQ6P3V2 769 aa16.41■□□□□ 0.22
PTPN11-204ENST00000531326 FAM111BQ6SJ93 734 aa16.41■□□□□ 0.22
PTPN11-204ENST00000531326 CAMKMTQ7Z624 323 aa16.41■□□□□ 0.22
PTPN11-204ENST00000531326 FAM9CQ8IZT9 166 aa16.41■□□□□ 0.22
PTPN11-204ENST00000531326 FAM109AQ8N4B1 249 aa16.41■□□□□ 0.22
PTPN11-204ENST00000531326 ADCY4Q8NFM4 1077 aa16.41■□□□□ 0.22
PTPN11-204ENST00000531326 ZNF675Q8TD23 568 aa16.41■□□□□ 0.22
PTPN11-204ENST00000531326 CTHRC1Q96CG8 243 aa16.41■□□□□ 0.22
PTPN11-204ENST00000531326 SGCZQ96LD1 299 aa16.41■□□□□ 0.22
PTPN11-204ENST00000531326 AMDHD1Q96NU7 426 aa16.41■□□□□ 0.22
PTPN11-204ENST00000531326 ZNF559Q9BR84 538 aa16.41■□□□□ 0.22
PTPN11-204ENST00000531326 CNPPD1Q9BV87 410 aa16.41■□□□□ 0.22
PTPN11-204ENST00000531326 DPY30Q9C005 99 aa16.41■□□□□ 0.22
PTPN11-204ENST00000531326 IL1RL2Q9HB29 575 aa16.41■□□□□ 0.22
PTPN11-204ENST00000531326 TUBA8Q9NY65 449 aaPredicted RBP16.41■□□□□ 0.22
PTPN11-204ENST00000531326 KCNN3Q9UGI6 736 aa16.41■□□□□ 0.22
PTPN11-204ENST00000531326 ZNF639Q9UID6 485 aa16.41■□□□□ 0.22
PTPN11-204ENST00000531326 NCKAP5O14513 1909 aa16.41■□□□□ 0.22
PTPN11-204ENST00000531326 A0A0G2JND7 137 aa16.4■□□□□ 0.22
PTPN11-204ENST00000531326 A0A0G2JNJ9 132 aa16.4■□□□□ 0.22
PTPN11-204ENST00000531326 BCKDKO14874 412 aa16.4■□□□□ 0.22
PTPN11-204ENST00000531326 PDPK1O15530 556 aa16.4■□□□□ 0.22
PTPN11-204ENST00000531326 DYRK3O43781 588 aa16.4■□□□□ 0.22
PTPN11-204ENST00000531326 GLI4P10075 376 aa16.4■□□□□ 0.22
PTPN11-204ENST00000531326 TROVE2P10155 538 aaKnown RBP eCLIP16.4■□□□□ 0.22
PTPN11-204ENST00000531326 IL12AP29459 219 aa16.4■□□□□ 0.22
PTPN11-204ENST00000531326 NTSP30990 170 aa16.4■□□□□ 0.22
PTPN11-204ENST00000531326 SSTR4P31391 388 aa16.4■□□□□ 0.22
PTPN11-204ENST00000531326 MPIP34949 423 aa16.4■□□□□ 0.22
PTPN11-204ENST00000531326 NCBP2P52298 156 aaKnown RBP eCLIP16.4■□□□□ 0.22
PTPN11-204ENST00000531326 NME5P56597 212 aa16.4■□□□□ 0.22
PTPN11-204ENST00000531326 GSTA3Q16772 222 aa16.4■□□□□ 0.22
PTPN11-204ENST00000531326 HYAL4Q2M3T9 481 aa16.4■□□□□ 0.22
PTPN11-204ENST00000531326 PDCD4Q53EL6 469 aaKnown RBP16.4■□□□□ 0.22
PTPN11-204ENST00000531326 CPTPQ5TA50 214 aa16.4■□□□□ 0.22
PTPN11-204ENST00000531326 OPN5Q6U736 354 aa16.4■□□□□ 0.22
PTPN11-204ENST00000531326 LIX1LQ8IVB5 337 aa16.4■□□□□ 0.22
PTPN11-204ENST00000531326 OR10Q1Q8NGQ4 319 aa16.4■□□□□ 0.22
PTPN11-204ENST00000531326 NRGNQ92686 78 aa16.4■□□□□ 0.22
PTPN11-204ENST00000531326 CHMP6Q96FZ7 201 aa16.4■□□□□ 0.22
PTPN11-204ENST00000531326 ART5Q96L15 291 aa16.4■□□□□ 0.22
PTPN11-204ENST00000531326 SDR39U1Q9NRG7 319 aaPredicted RBP16.4■□□□□ 0.22
PTPN11-204ENST00000531326 SACM1LQ9NTJ5 587 aa16.4■□□□□ 0.22
PTPN11-204ENST00000531326 Q9UFV3 132 aa16.4■□□□□ 0.22
PTPN11-204ENST00000531326 MAPRE3Q9UPY8 281 aa16.4■□□□□ 0.22
PTPN11-204ENST00000531326 FIGNL2A6NMB9 653 aa16.39■□□□□ 0.21
PTPN11-204ENST00000531326 AQP7O14520 342 aa16.39■□□□□ 0.21
PTPN11-204ENST00000531326 CBX7O95931 251 aa16.39■□□□□ 0.21
PTPN11-204ENST00000531326 PCSK2P16519 638 aa16.39■□□□□ 0.21
PTPN11-204ENST00000531326 DDX5P17844 614 aaKnown RBP16.39■□□□□ 0.21
PTPN11-204ENST00000531326 ENDOUP21128 410 aaKnown RBP16.39■□□□□ 0.21
PTPN11-204ENST00000531326 LSP1P33241 339 aa16.39■□□□□ 0.21
PTPN11-204ENST00000531326 PIGAP37287 484 aa16.39■□□□□ 0.21
PTPN11-204ENST00000531326 ADH7P40394 386 aa16.39■□□□□ 0.21
PTPN11-204ENST00000531326 MRPL19P49406 292 aaKnown RBP16.39■□□□□ 0.21
PTPN11-204ENST00000531326 DLX5P56178 289 aa16.39■□□□□ 0.21
PTPN11-204ENST00000531326 SLC37A1P57057 533 aa16.39■□□□□ 0.21
PTPN11-204ENST00000531326 MRPS35P82673 323 aaKnown RBP16.39■□□□□ 0.21
PTPN11-204ENST00000531326 DUSP8Q13202 625 aa16.39■□□□□ 0.21
PTPN11-204ENST00000531326 TRMT12Q53H54 448 aaKnown RBP16.39■□□□□ 0.21
PTPN11-204ENST00000531326 PIGGQ5H8A4 983 aa16.39■□□□□ 0.21
PTPN11-204ENST00000531326 B3GNT6Q6ZMB0 384 aa16.39■□□□□ 0.21
PTPN11-204ENST00000531326 ZNF551Q7Z340 670 aaPredicted RBP16.39■□□□□ 0.21
PTPN11-204ENST00000531326 TMEM200AQ86VY9 491 aa16.39■□□□□ 0.21
PTPN11-204ENST00000531326 C9orf40Q8IXQ3 194 aa16.39■□□□□ 0.21
PTPN11-204ENST00000531326 VWA5B2Q8N398 1253 aa16.39■□□□□ 0.21
PTPN11-204ENST00000531326 ZNF615Q8N8J6 731 aa16.39■□□□□ 0.21
PTPN11-204ENST00000531326 SIMC1Q8NDZ2 872 aa16.39■□□□□ 0.21
PTPN11-204ENST00000531326 OR5L2Q8NGL0 311 aa16.39■□□□□ 0.21
PTPN11-204ENST00000531326 KAT2AQ92830 837 aa16.39■□□□□ 0.21
PTPN11-204ENST00000531326 TESCQ96BS2 214 aa16.39■□□□□ 0.21
PTPN11-204ENST00000531326 PRPF18Q99633 342 aaKnown RBP16.39■□□□□ 0.21
PTPN11-204ENST00000531326 TMEM120AQ9BXJ8 343 aa16.39■□□□□ 0.21
PTPN11-204ENST00000531326 BHLHE41Q9C0J9 482 aaPredicted RBP16.39■□□□□ 0.21
PTPN11-204ENST00000531326 SH2D2AQ9NP31 389 aa16.39■□□□□ 0.21
PTPN11-204ENST00000531326 ACSS1Q9NUB1 689 aaPredicted RBP16.39■□□□□ 0.21
PTPN11-204ENST00000531326 COPS7AQ9UBW8 275 aa16.39■□□□□ 0.21
PTPN11-204ENST00000531326 ITPR3Q14573 2671 aa16.39■□□□□ 0.21
PTPN11-204ENST00000531326 ZNF469Q96JG9 3925 aaPredicted RBP16.38■□□□□ 0.21
PTPN11-204ENST00000531326 C9JVG2 144 aa16.38■□□□□ 0.21
PTPN11-204ENST00000531326 SUSD5O60279 629 aa16.38■□□□□ 0.21
PTPN11-204ENST00000531326 NADKO95544 446 aaPredicted RBP16.38■□□□□ 0.21
PTPN11-204ENST00000531326 P04436 131 aa16.38■□□□□ 0.21
PTPN11-204ENST00000531326 CD1EP15812 388 aa16.38■□□□□ 0.21
PTPN11-204ENST00000531326 EFNA1P20827 205 aaPredicted RBP16.38■□□□□ 0.21
PTPN11-204ENST00000531326 ZFP36L2P47974 494 aaKnown RBP16.38■□□□□ 0.21
PTPN11-204ENST00000531326 ART1P52961 327 aa16.38■□□□□ 0.21
PTPN11-204ENST00000531326 SEC24CP53992 1094 aa16.38■□□□□ 0.21
PTPN11-204ENST00000531326 CLNS1AP54105 237 aaKnown RBP16.38■□□□□ 0.21
PTPN11-204ENST00000531326 WNT3P56703 355 aa16.38■□□□□ 0.21
PTPN11-204ENST00000531326 GNGT1P63211 74 aa16.38■□□□□ 0.21
PTPN11-204ENST00000531326 PHC1P78364 1004 aa16.38■□□□□ 0.21
PTPN11-204ENST00000531326 SF3A3Q12874 501 aaKnown RBP eCLIP16.38■□□□□ 0.21
PTPN11-204ENST00000531326 SLC10A1Q14973 349 aa16.38■□□□□ 0.21
PTPN11-204ENST00000531326 RPS6KA2Q15349 733 aa16.38■□□□□ 0.21
PTPN11-204ENST00000531326 ZNF791Q3KP31 576 aaPredicted RBP16.38■□□□□ 0.21
PTPN11-204ENST00000531326 C6orf163Q5TEZ5 329 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms