RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 SORBS1Q9BX66 1292 aaKnown RBP7.32□□□□□ -1.24
CD44-232ENST00000531118 ITPAQ9BY32 194 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 POTEKPQ9BYX7 375 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 TSGA10Q9BZW7 698 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 STMN4Q9H169 189 aaPredicted RBP7.32□□□□□ -1.24
CD44-232ENST00000531118 OR10A5Q9H207 317 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 ZNF696Q9H7X3 374 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 PLSCR4Q9NRQ2 329 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 C20orf96Q9NUD7 363 aaPredicted RBP7.32□□□□□ -1.24
CD44-232ENST00000531118 CISD1Q9NZ45 108 aaKnown RBP7.32□□□□□ -1.24
CD44-232ENST00000531118 PHF11Q9UIL8 331 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 CLEC4AQ9UMR7 237 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 SNX8Q9Y5X2 465 aa7.32□□□□□ -1.24
CD44-232ENST00000531118 C17orf51A8MQB3 221 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 MIF4GDA9UHW6 222 aaKnown RBP7.31□□□□□ -1.24
CD44-232ENST00000531118 VWC2LB2RUY7 222 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 H7C417 338 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 TMPRSS2O15393 492 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 RAMP1O60894 148 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 SH3BGRLO75368 114 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 GCM2O75603 506 aaPredicted RBP7.31□□□□□ -1.24
CD44-232ENST00000531118 GPR75O95800 540 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 AIFM1O95831 613 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 NR2F6P10588 404 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 NAGAP17050 411 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 BUD31P41223 144 aaPredicted RBP7.31□□□□□ -1.24
CD44-232ENST00000531118 GDF5P43026 501 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 SLC6A8P48029 635 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 NAP1L1P55209 391 aaKnown RBP7.31□□□□□ -1.24
CD44-232ENST00000531118 CTBP2P56545 445 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 EEFSECP57772 596 aaKnown RBP7.31□□□□□ -1.24
CD44-232ENST00000531118 CDKL1Q00532 357 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 CDK16Q00536 496 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 IRF9Q00978 393 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 HMGCS1Q01581 520 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 TSC22D1Q15714 1073 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 AP5B1Q2VPB7 878 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 SEL1L2Q5TEA6 688 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 PPP4R4Q6NUP7 873 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 NUP54Q7Z3B4 507 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 CNGA4Q8IV77 575 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 VSTM4Q8IW00 320 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 AGGF1Q8N302 714 aaeCLIP7.31□□□□□ -1.24
CD44-232ENST00000531118 C2CD4AQ8NCU7 369 aaPredicted RBP7.31□□□□□ -1.24
CD44-232ENST00000531118 KAT2AQ92830 837 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 GFM2Q969S9 779 aaKnown RBP7.31□□□□□ -1.24
CD44-232ENST00000531118 PTCD3Q96EY7 689 aaKnown RBP7.31□□□□□ -1.24
CD44-232ENST00000531118 GMPPAQ96IJ6 420 aaPredicted RBP7.31□□□□□ -1.24
CD44-232ENST00000531118 SERPINB12Q96P63 405 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 TMEM79Q9BSE2 394 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 PIMREGQ9BSJ6 248 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 SSBP4Q9BWG4 385 aaPredicted RBP7.31□□□□□ -1.24
CD44-232ENST00000531118 TMPRSS13Q9BYE2 586 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 EHD1Q9H4M9 534 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 CXorf21Q9HAI6 301 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 ZBTB26Q9HCK0 441 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 NGBQ9NPG2 151 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 IARS2Q9NSE4 1012 aaKnown RBP7.31□□□□□ -1.24
CD44-232ENST00000531118 CBLN4Q9NTU7 201 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 MS4A12Q9NXJ0 267 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 GPRC5BQ9NZH0 403 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 ZNF490Q9ULM2 529 aaPredicted RBP7.31□□□□□ -1.24
CD44-232ENST00000531118 MRPS18CQ9Y3D5 142 aaKnown RBP7.31□□□□□ -1.24
CD44-232ENST00000531118 VWFP04275 2813 aa7.31□□□□□ -1.24
CD44-232ENST00000531118 A0A0A6YYJ9 748 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 IGHV4-61A0A0C4DH41 118 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 ESYT3A0FGR9 886 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 DPRXA6NFQ7 191 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 GLOD5A6NK44 160 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 SDR42E2A6NKP2 422 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 SLCO1B7G3V0H7 640 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 H3BML4 177 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 SAP18O00422 153 aaKnown RBP7.3□□□□□ -1.24
CD44-232ENST00000531118 ZIC3O60481 467 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 PLGP00747 810 aaPredicted RBP7.3□□□□□ -1.24
CD44-232ENST00000531118 TGFAP01135 160 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 CCDC175P0C221 793 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 SLC35E2BP0CK96 405 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 SLC35E2P0CK97 266 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 IL32P24001 234 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 GRK2P25098 689 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 GABRB3P28472 473 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 TLX1P31314 330 aaPredicted RBP7.3□□□□□ -1.24
CD44-232ENST00000531118 HNMTP50135 292 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 TERF1P54274 439 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 CLDN20P56880 219 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 RPS3AP61247 264 aaKnown RBP7.3□□□□□ -1.24
CD44-232ENST00000531118 TAGLNQ01995 201 aaKnown RBP7.3□□□□□ -1.24
CD44-232ENST00000531118 KIF5AQ12840 1032 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 KCTD19Q17RG1 926 aaPredicted RBP7.3□□□□□ -1.24
CD44-232ENST00000531118 TMEM35AQ53FP2 167 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 HSP90AA5PQ58FG0 334 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 EXOSC6Q5RKV6 272 aaKnown RBP7.3□□□□□ -1.24
CD44-232ENST00000531118 ANKRD22Q5VYY1 191 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 FDX2Q6P4F2 183 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 C4orf22Q6V702 233 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 PEX26Q7Z412 305 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 STK32CQ86UX6 486 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 GPR180Q86V85 440 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 LRRC17Q8N6Y2 441 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms