RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 STK25O00506 426 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 LINC01565O15544 149 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 OR5F1O95221 314 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 COL9A1P20849 921 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 RPS19P39019 145 aaKnown RBP16.11■□□□□ 0.17
BRCA2-204ENST00000530893 OMPP47874 163 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 WNT4P56705 351 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 RGS8P57771 180 aaPredicted RBP16.11■□□□□ 0.17
BRCA2-204ENST00000530893 CBX3Q13185 183 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 PRICKLE2Q7Z3G6 844 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 FLVCR1-AS1Q8TAF5 88 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 ZFPM2Q8WW38 1151 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 JPH3Q8WXH2 748 aaPredicted RBP16.11■□□□□ 0.17
BRCA2-204ENST00000530893 MRPL38Q96DV4 380 aaKnown RBP16.11■□□□□ 0.17
BRCA2-204ENST00000530893 PLA2G12AQ9BZM1 189 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 EGLN3Q9H6Z9 239 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 POLE4Q9NR33 117 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 CTPS2Q9NRF8 586 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 MED17Q9NVC6 651 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 CHST2Q9Y4C5 530 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 A6NCN8 305 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 CPSF4LA6NMK7 179 aaKnown RBP16.11■□□□□ 0.17
BRCA2-204ENST00000530893 KDM4EB2RXH2 506 aaPredicted RBP16.11■□□□□ 0.17
BRCA2-204ENST00000530893 SCAMP1O15126 338 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 ZSCAN9O15535 394 aaPredicted RBP16.11■□□□□ 0.17
BRCA2-204ENST00000530893 B3GALT2O43825 422 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 KLF8O95600 359 aaPredicted RBP16.11■□□□□ 0.17
BRCA2-204ENST00000530893 AK4P27144 223 aaPredicted RBP16.11■□□□□ 0.17
BRCA2-204ENST00000530893 PBX2P40425 430 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 MTNR1AP48039 350 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 GAS1P54826 345 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 CLDN2P57739 230 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 LSM11P83369 360 aaKnown RBP eCLIP16.11■□□□□ 0.17
BRCA2-204ENST00000530893 RUNX1T1Q06455 604 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 SLC13A2Q13183 592 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 LARS2Q15031 903 aaKnown RBP16.11■□□□□ 0.17
BRCA2-204ENST00000530893 LTB4RQ15722 352 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 ARHGAP11BQ3KRB8 267 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 FRRS1Q6ZNA5 592 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 USP53Q70EK8 1073 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 PEX5LQ8IYB4 626 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 CAMKVQ8NCB2 501 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 OR7G2Q8NG99 324 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 RFKQ969G6 155 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 ZG16BQ96DA0 208 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 SMURF1Q9HCE7 757 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 KRCC1Q9NPI7 259 aaPredicted RBP16.11■□□□□ 0.17
BRCA2-204ENST00000530893 DAPP1Q9UN19 280 aa16.11■□□□□ 0.17
BRCA2-204ENST00000530893 GPR55Q9Y2T6 319 aaPredicted RBP16.11■□□□□ 0.17
BRCA2-204ENST00000530893 EXOSC1Q9Y3B2 195 aaKnown RBP16.11■□□□□ 0.17
BRCA2-204ENST00000530893 IQCMA0A1B0GVH7 501 aa16.1■□□□□ 0.17
BRCA2-204ENST00000530893 IL1AP01583 271 aa16.1■□□□□ 0.17
BRCA2-204ENST00000530893 ALOX12P18054 663 aa16.1■□□□□ 0.17
BRCA2-204ENST00000530893 HNRNPA2B1P22626 353 aaKnown RBP16.1■□□□□ 0.17
BRCA2-204ENST00000530893 ETV5P41161 510 aa16.1■□□□□ 0.17
BRCA2-204ENST00000530893 ACTR1BP42025 376 aa16.1■□□□□ 0.17
BRCA2-204ENST00000530893 ETV1P50549 477 aa16.1■□□□□ 0.17
BRCA2-204ENST00000530893 PDX1P52945 283 aa16.1■□□□□ 0.17
BRCA2-204ENST00000530893 ACTR1AP61163 376 aa16.1■□□□□ 0.17
BRCA2-204ENST00000530893 HYAL1Q12794 435 aa16.1■□□□□ 0.17
BRCA2-204ENST00000530893 EIPR1Q53HC9 387 aa16.1■□□□□ 0.17
BRCA2-204ENST00000530893 FAM111BQ6SJ93 734 aa16.1■□□□□ 0.17
BRCA2-204ENST00000530893 PLEKHM3Q6ZWE6 761 aa16.1■□□□□ 0.17
BRCA2-204ENST00000530893 ABHD13Q7L211 337 aa16.1■□□□□ 0.17
BRCA2-204ENST00000530893 SLC16A11Q8NCK7 471 aa16.1■□□□□ 0.17
BRCA2-204ENST00000530893 ANKK1Q8NFD2 765 aa16.1■□□□□ 0.17
BRCA2-204ENST00000530893 WDFY2Q96P53 400 aa16.1■□□□□ 0.17
BRCA2-204ENST00000530893 OR2A14Q96R47 310 aa16.1■□□□□ 0.17
BRCA2-204ENST00000530893 IL20Q9NYY1 176 aa16.1■□□□□ 0.17
BRCA2-204ENST00000530893 NLGN3Q9NZ94 848 aa16.1■□□□□ 0.17
BRCA2-204ENST00000530893 PAIP2BQ9ULR5 123 aaKnown RBP16.1■□□□□ 0.17
BRCA2-204ENST00000530893 ZNF443Q9Y2A4 671 aaPredicted RBP16.1■□□□□ 0.17
BRCA2-204ENST00000530893 GOLGA4Q13439 2230 aaKnown RBP16.1■□□□□ 0.17
BRCA2-204ENST00000530893 ATG2BQ96BY7 2078 aa16.1■□□□□ 0.17
BRCA2-204ENST00000530893 SLC35F4A4IF30 521 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 AQP9O43315 295 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 FCMRO60667 390 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 THBS1P07996 1170 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 TRHRP34981 398 aaPredicted RBP16.09■□□□□ 0.17
BRCA2-204ENST00000530893 AVPR1BP47901 424 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 SEPHS1P49903 392 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 YPEL5P62699 121 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 PUS10Q3MIT2 529 aaKnown RBP16.09■□□□□ 0.17
BRCA2-204ENST00000530893 C6orf132Q5T0Z8 1188 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 LIPKQ5VXJ0 399 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 MBOAT2Q6ZWT7 520 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 LAPTM4BQ86VI4 370 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 CLDN22Q8N7P3 220 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 FAM83FQ8NEG4 500 aaPredicted RBP16.09■□□□□ 0.17
BRCA2-204ENST00000530893 SLC9A6Q92581 669 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 RSC1A1Q92681 617 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 RNFT2Q96EX2 444 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 FCRL4Q96PJ5 515 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 KCNS3Q9BQ31 491 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 LYRM4Q9HD34 91 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 WDR45Q9Y484 360 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 CTDSP2O14595 271 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 ZIC2O95409 532 aaPredicted RBP16.09■□□□□ 0.17
BRCA2-204ENST00000530893 IFI6P09912 130 aa16.09■□□□□ 0.17
BRCA2-204ENST00000530893 MAGP20916 626 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms