RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 CERS1P27544 350 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 PCBP3P57721 371 aaKnown RBP10.87□□□□□ -0.67
USP35-207ENST00000530546 PCBP4P57723 403 aaKnown RBP10.87□□□□□ -0.67
USP35-207ENST00000530546 RAB25P57735 213 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 HTR4Q13639 388 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 SOWAHCQ53LP3 525 aaPredicted RBP10.87□□□□□ -0.67
USP35-207ENST00000530546 CRB2Q5IJ48 1285 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 KIF18BQ86Y91 864 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 DNAJC22Q8N4W6 341 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 FRMD1Q8N878 549 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.87□□□□□ -0.67
USP35-207ENST00000530546 OR10Z1Q8NGY1 313 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 LILRB1Q8NHL6 650 aaPredicted RBP10.87□□□□□ -0.67
USP35-207ENST00000530546 RNF31Q96EP0 1072 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 HRASLS5Q96KN8 279 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 RAB11FIP5Q9BXF6 653 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 TMEM168Q9H0V1 697 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 GLIPR2Q9H4G4 154 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 ZCCHC3Q9NUD5 404 aaKnown RBP10.87□□□□□ -0.67
USP35-207ENST00000530546 ATPIF1Q9UII2 106 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 ATG4BQ9Y4P1 393 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 HSPB11Q9Y547 144 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 BTN3A3O00478 584 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 AKR7A2O43488 359 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 NME6O75414 186 aaPredicted RBP10.87□□□□□ -0.67
USP35-207ENST00000530546 SERPINI2O75830 405 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 GADD45GO95257 159 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 FEN1P39748 380 aaKnown RBP10.87□□□□□ -0.67
USP35-207ENST00000530546 ETV1P50549 477 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 B2MP61769 119 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 TEKQ02763 1124 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 SLC9A5Q14940 896 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 SYPL1Q16563 259 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 C18orf63Q68DL7 685 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 LAMTOR1Q6IAA8 161 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 CCDC116Q8IYX3 515 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 ACOT4Q8N9L9 421 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 RPLP0P6Q8NHW5 317 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 C9orf43Q8TAL5 461 aaPredicted RBP10.87□□□□□ -0.67
USP35-207ENST00000530546 MS4A6EQ96DS6 147 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 TOE1Q96GM8 510 aaKnown RBP10.87□□□□□ -0.67
USP35-207ENST00000530546 MRGPRX1Q96LB2 322 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 HYLS1Q96M11 299 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 HDHD5Q9BXW7 423 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 KCNK12Q9HB15 430 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 NEUROD4Q9HD90 331 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 TICRRQ7Z2Z1 1910 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 ANHXE9PGG2 379 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 RGS5O15539 181 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 PROM1O43490 865 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 SLC22A5O76082 557 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 IFNW1P05000 195 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 ALAS2P22557 587 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 CMPK1P30085 196 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 TMEM92Q6UXU6 159 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 RBM45Q8IUH3 476 aaKnown RBP10.86□□□□□ -0.67
USP35-207ENST00000530546 TAGAPQ8N103 731 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 PMEPA1Q969W9 287 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 ZNF578Q96N58 590 aaPredicted RBP10.86□□□□□ -0.67
USP35-207ENST00000530546 PIP5K1AQ99755 562 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 OR51I1Q9H343 314 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 SERHL2Q9H4I8 314 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 SLC35C2Q9NQQ7 365 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 COLEC10Q9Y6Z7 277 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 KNL1Q8NG31 2342 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 MYO10Q9HD67 2058 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 A0A1W2PR48 441 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 HMGN4O00479 90 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 SCO1O75880 301 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 CYP7B1O75881 506 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 FOSL1P15407 271 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 NDUFV2P19404 249 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 HIST1H1TP22492 207 aaPredicted RBP10.86□□□□□ -0.67
USP35-207ENST00000530546 POU1F1P28069 291 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 NUDT6P53370 316 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 SNTA1Q13424 505 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 PUM1Q14671 1186 aaKnown RBP eCLIP10.86□□□□□ -0.67
USP35-207ENST00000530546 GPR19Q15760 415 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 MICAQ29983 383 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 TMEM65Q6PI78 240 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 DEF8Q6ZN54 512 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 GDPD1Q8N9F7 314 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 KCT2Q8NC54 265 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 OR4C15Q8NGM1 316 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 OR10G6Q8NH81 332 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 ENKURQ8TC29 256 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 GPR151Q8TDV0 419 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 SLC35G5Q96KT7 338 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 AMDHD1Q96NU7 426 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 DCLRE1CQ96SD1 692 aaKnown RBP10.86□□□□□ -0.67
USP35-207ENST00000530546 FAIM2Q9BWQ8 316 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 GABARAPL3Q9BY60 117 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 PRRG3Q9BZD7 231 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 PITHD1Q9GZP4 211 aaPredicted RBP10.86□□□□□ -0.67
USP35-207ENST00000530546 C11orf54Q9H0W9 315 aaPredicted RBP10.86□□□□□ -0.67
USP35-207ENST00000530546 ANKRA2Q9H9E1 313 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 ACER3Q9NUN7 267 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 APOBEC3BQ9UH17 382 aaKnown RBP10.86□□□□□ -0.67
USP35-207ENST00000530546 SLC23A1Q9UHI7 598 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 PCDHGA6Q9Y5G7 932 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms