RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 OR1E2P47887 323 aa13.39□□□□□ -0.27
TTC39A-216ENST00000530004 FOXL2P58012 376 aa13.39□□□□□ -0.27
TTC39A-216ENST00000530004 TGIF1Q15583 401 aa13.39□□□□□ -0.27
TTC39A-216ENST00000530004 DUSP5Q16690 384 aa13.39□□□□□ -0.27
TTC39A-216ENST00000530004 DUSP7Q16829 419 aa13.39□□□□□ -0.27
TTC39A-216ENST00000530004 MINDY4Q4G0A6 757 aa13.39□□□□□ -0.27
TTC39A-216ENST00000530004 OR2T5Q6IEZ7 315 aa13.39□□□□□ -0.27
TTC39A-216ENST00000530004 PIWIL3Q7Z3Z3 882 aaKnown RBP13.39□□□□□ -0.27
TTC39A-216ENST00000530004 LAPTM4BQ86VI4 370 aa13.39□□□□□ -0.27
TTC39A-216ENST00000530004 PRSS58Q8IYP2 241 aa13.39□□□□□ -0.27
TTC39A-216ENST00000530004 IL22RA1Q8N6P7 574 aa13.39□□□□□ -0.27
TTC39A-216ENST00000530004 PACRGLQ8N7B6 248 aa13.39□□□□□ -0.27
TTC39A-216ENST00000530004 CDRT4Q8N9R6 151 aa13.39□□□□□ -0.27
TTC39A-216ENST00000530004 OR2T29Q8NH02 315 aa13.39□□□□□ -0.27
TTC39A-216ENST00000530004 GEMIN6Q8WXD5 167 aaKnown RBP13.39□□□□□ -0.27
TTC39A-216ENST00000530004 BTBD9Q96Q07 612 aa13.39□□□□□ -0.27
TTC39A-216ENST00000530004 TRNT1Q96Q11 434 aaKnown RBP13.39□□□□□ -0.27
TTC39A-216ENST00000530004 ZNF639Q9UID6 485 aa13.39□□□□□ -0.27
TTC39A-216ENST00000530004 NXT1Q9UKK6 140 aaKnown RBP13.39□□□□□ -0.27
TTC39A-216ENST00000530004 LRCH1Q9Y2L9 728 aa13.39□□□□□ -0.27
TTC39A-216ENST00000530004 GPC6Q9Y625 555 aaPredicted RBP13.39□□□□□ -0.27
TTC39A-216ENST00000530004 A0A0G2JPF8 293 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 LOC101059948A0A1B0GTJ6 334 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 C7orf72A4D263 438 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 HNRNPCL2B2RXH8 293 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 HNRNPCL3B7ZW38 293 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 C21orf140B9A014 251 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 G3V2T6 193 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 H0YJX3 145 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 EI24O14681 340 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 TERTO14746 1132 aaKnown RBP13.38□□□□□ -0.27
TTC39A-216ENST00000530004 E2F6O75461 281 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 KLF7O75840 302 aaPredicted RBP13.38□□□□□ -0.27
TTC39A-216ENST00000530004 RASAL1O95294 804 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 CD63P08962 238 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 ALOX5P09917 674 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 HNRNPCL4P0DMR1 293 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 CD247P20963 164 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 S1PR1P21453 382 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 PPP1R8Q12972 351 aaKnown RBP13.38□□□□□ -0.27
TTC39A-216ENST00000530004 DUSP8Q13202 625 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 BIKQ13323 160 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 IQCCQ4KMZ1 466 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 PRAMEF8Q5VWM4 474 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 PRAMEF7Q5VXH5 474 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 HEPHL1Q6MZM0 1159 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 ZCCHC12Q6PEW1 402 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 TBPL2Q6SJ96 375 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 QSOX2Q6ZRP7 698 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 SHISA6Q6ZSJ9 500 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 ZDHHC13Q8IUH4 622 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 TMEM151BQ8IW70 566 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 FGF11Q92914 225 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 ZNF597Q96LX8 424 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 PELOQ9BRX2 385 aaKnown RBP13.38□□□□□ -0.27
TTC39A-216ENST00000530004 BTBD2Q9BX70 525 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 FAM117AQ9C073 453 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 PIGUQ9H490 435 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 SOX17Q9H6I2 414 aaPredicted RBP13.38□□□□□ -0.27
TTC39A-216ENST00000530004 C8orf4Q9NR00 106 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 CALML5Q9NZT1 146 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 SEC14L3Q9UDX4 400 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 MKL2Q9ULH7 1088 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 SH3GLB1Q9Y371 365 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 U3KQV3 271 aa13.38□□□□□ -0.27
TTC39A-216ENST00000530004 MED19A0JLT2 244 aaPredicted RBP13.37□□□□□ -0.27
TTC39A-216ENST00000530004 A8MVJ9 347 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 HRKO00198 91 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 RPSAP08865 295 aaKnown RBP13.37□□□□□ -0.27
TTC39A-216ENST00000530004 UQCRBP14927 111 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 ETS2P15036 469 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 TNNI3P19429 210 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 F8A1P23610 371 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 DLSTP36957 453 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 HSPA13P48723 471 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 PGDP52209 483 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 EFNA3P52797 238 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 RPS15P62841 145 aaKnown RBP13.37□□□□□ -0.27
TTC39A-216ENST00000530004 HPCAP84074 193 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 CHRNEQ04844 493 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 ZNF155Q12901 538 aaPredicted RBP13.37□□□□□ -0.27
TTC39A-216ENST00000530004 DNASE1L3Q13609 305 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 ZNF267Q14586 743 aaPredicted RBP13.37□□□□□ -0.27
TTC39A-216ENST00000530004 EXOSC6Q5RKV6 272 aaKnown RBP13.37□□□□□ -0.27
TTC39A-216ENST00000530004 OTUD3Q5T2D3 398 aaPredicted RBP13.37□□□□□ -0.27
TTC39A-216ENST00000530004 HMGN2P46Q86SG4 172 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 STK32CQ86UX6 486 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 GPR32P1Q8NGA4 272 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 RASSF5Q8WWW0 418 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 GATA6Q92908 595 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 SDCCAG3Q96C92 435 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 CNPPD1Q9BV87 410 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 SPATA5L1Q9BVQ7 753 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 GPR87Q9BY21 358 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 VN1R1Q9GZP7 353 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 SLC38A1Q9H2H9 487 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 VNN3Q9NY84 501 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 NDUFAF4Q9P032 175 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 DKK4Q9UBT3 224 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 FARSAQ9Y285 508 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms