RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 FBXL2Q9UKC9 423 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 PSME2Q9UL46 239 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 LAMP3Q9UQV4 416 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 DTX4Q9Y2E6 619 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 EMC9Q9Y3B6 208 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 ZNF175Q9Y473 711 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 USF3Q68DE3 2245 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 C1orf226A1L170 272 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 UBXN8O00124 270 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 FOXE1O00358 373 aaPredicted RBP8.09□□□□□ -1.11
VPS11-203ENST00000529545 TO15178 435 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 SEC14L5O43304 696 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 ZIC3O60481 467 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 KERAO60938 352 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 ERAL1O75616 437 aaKnown RBP8.09□□□□□ -1.11
VPS11-203ENST00000529545 PLGP00747 810 aaPredicted RBP8.09□□□□□ -1.11
VPS11-203ENST00000529545 KLK1P06870 262 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 THBDP07204 575 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 FAM157CP0CG43 387 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 GFAPP14136 432 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 GRK2P25098 689 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 IVDP26440 423 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 PIK3CGP48736 1102 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 CTBP2P56545 445 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 PSPHP78330 225 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 PON3Q15166 354 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 SGCBQ16585 318 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 PRICKLE4Q2TBC4 344 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 CCNYL2Q5T2Q4 361 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 FAM214BQ7L5A3 538 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 ISCA2Q86U28 154 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 WFDC8Q8IUA0 241 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 ZBED8Q8IZ13 594 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 OR52R1Q8NGF1 315 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 FNDC9Q8TBE3 224 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 AKAP1Q92667 903 aaKnown RBP eCLIP8.09□□□□□ -1.11
VPS11-203ENST00000529545 GFM2Q969S9 779 aaKnown RBP8.09□□□□□ -1.11
VPS11-203ENST00000529545 SLC35A4Q96G79 324 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 OSBPL9Q96SU4 736 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 ADOQ96SZ5 270 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 GPR22Q99680 433 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 RBBP8Q99708 897 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 MCMBPQ9BTE3 642 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 PTGES2Q9H7Z7 377 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 RNF122Q9H9V4 155 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 SDHAF3Q9NRP4 125 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 MAT2BQ9NZL9 334 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 PPP4R1LQ9P1A2 415 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 STOML1Q9UBI4 398 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 PLLPQ9Y342 182 aa8.09□□□□□ -1.11
VPS11-203ENST00000529545 ROS1P08922 2347 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 H3BML4 177 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 PIAS1O75925 651 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 BCAS2O75934 225 aaPredicted RBP8.08□□□□□ -1.12
VPS11-203ENST00000529545 PLAUP00749 431 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 ATP1B1P05026 303 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 FESP07332 822 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 LTA4HP09960 611 aaKnown RBP8.08□□□□□ -1.12
VPS11-203ENST00000529545 HK1P19367 917 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 SPRP35270 261 aaPredicted RBP8.08□□□□□ -1.12
VPS11-203ENST00000529545 FEN1P39748 380 aaKnown RBP8.08□□□□□ -1.12
VPS11-203ENST00000529545 GP5P40197 560 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 MAPK12P53778 367 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 B3GALT5-AS1P59052 145 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 DR1Q01658 176 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 MGAT2Q10469 447 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 FASTKD3Q14CZ7 662 aaKnown RBP8.08□□□□□ -1.12
VPS11-203ENST00000529545 ZKSCAN8Q15776 578 aaPredicted RBP8.08□□□□□ -1.12
VPS11-203ENST00000529545 PFKFB4Q16877 469 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 TTC19Q6DKK2 380 aaPredicted RBP8.08□□□□□ -1.12
VPS11-203ENST00000529545 ALKBH2Q6NS38 261 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 PPP4R4Q6NUP7 873 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 SLC48A1Q6P1K1 146 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 C22orf34Q6ZV56 151 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 LARP4Q71RC2 724 aaKnown RBP eCLIP8.08□□□□□ -1.12
VPS11-203ENST00000529545 STK32CQ86UX6 486 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 OR6K3Q8NGY3 331 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 TRPC4APQ8TEL6 797 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 PYROXD1Q8WU10 500 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 FBXW5Q969U6 566 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 ATP6V1E2Q96A05 226 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 KLHL29Q96CT2 875 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 HS6ST2Q96MM7 605 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 ATOH8Q96SQ7 321 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 TACO1Q9BSH4 297 aaKnown RBP8.08□□□□□ -1.12
VPS11-203ENST00000529545 SLCO5A1Q9H2Y9 848 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 IPPKQ9H8X2 491 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 BARX1Q9HBU1 254 aaPredicted RBP8.08□□□□□ -1.12
VPS11-203ENST00000529545 NGBQ9NPG2 151 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 PFDN4Q9NQP4 134 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 SMYD2Q9NRG4 433 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 PLSCR4Q9NRQ2 329 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 ADAM29Q9UKF5 820 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 CDC42EP3Q9UKI2 254 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 PPP2R2CQ9Y2T4 447 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 GPR55Q9Y2T6 319 aaPredicted RBP8.08□□□□□ -1.12
VPS11-203ENST00000529545 RNF11Q9Y3C5 154 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 ZNF337Q9Y3M9 751 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 PCDHA9Q9Y5H5 950 aa8.08□□□□□ -1.12
VPS11-203ENST00000529545 TNPO3Q9Y5L0 923 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms