RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 CCNJQ5T5M9 372 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 DCAF12Q5T6F0 453 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 FAM111BQ6SJ93 734 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 FAM131AQ6UXB0 335 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 PAMR1Q6UXH9 720 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 SFTPA1Q8IWL2 248 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 ATOH1Q92858 354 aaPredicted RBP14.16□□□□□ -0.14
USP47-207ENST00000527733 AMDHD1Q96NU7 426 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 ULBP3Q9BZM4 244 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 CBLCQ9ULV8 474 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 SLC35A3Q9Y2D2 325 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 HSPE1-MOB4S4R3N1 261 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 JRKO75564 520 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 ZFAND5O76080 213 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 WASH2PQ6VEQ5 465 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 ABHD11Q8NFV4 315 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 OR51G2Q8NGK0 314 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 DIRAS2Q96HU8 199 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 NPLQ9BXD5 320 aaPredicted RBP14.16□□□□□ -0.14
USP47-207ENST00000527733 WASH6PQ9NQA3 447 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 AGPAT4Q9NRZ5 378 aa14.16□□□□□ -0.14
USP47-207ENST00000527733 NPIPA5A0A0B4J1W7 369 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 NPIPA7E9PJI5 369 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 J3QLW9 94 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 SLC22A1O15245 554 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 CTNSO60931 367 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 NPIPA8P0DM63 369 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 ZNF19P17023 458 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 IL12AP29459 219 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 MNX1P50219 401 aaPredicted RBP14.15□□□□□ -0.14
USP47-207ENST00000527733 ELOAQ14241 798 aaKnown RBP14.15□□□□□ -0.14
USP47-207ENST00000527733 ADNP2Q6IQ32 1131 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 KRT77Q7Z794 578 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 TSPYL5Q86VY4 417 aaPredicted RBP14.15□□□□□ -0.14
USP47-207ENST00000527733 OR2A1Q8NGT9 310 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 OR14A16Q8NHC5 309 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 THEM6Q8WUY1 208 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 TAS2R7Q9NYW3 318 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 PTTG2Q9NZH5 202 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 COLQQ9Y215 455 aaPredicted RBP14.15□□□□□ -0.14
USP47-207ENST00000527733 PEX16Q9Y5Y5 336 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 LMO7DNF2Z398 122 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 TRIM23P36406 574 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 TFF2Q03403 129 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 C11orf88Q6PI97 169 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 USP43Q70EL4 1123 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 BORCS5Q969J3 196 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 FAM46AQ96IP4 442 aaKnown RBP14.15□□□□□ -0.14
USP47-207ENST00000527733 NMNAT1Q9HAN9 279 aaPredicted RBP14.15□□□□□ -0.14
USP47-207ENST00000527733 EXOSC1Q9Y3B2 195 aaKnown RBP14.15□□□□□ -0.14
USP47-207ENST00000527733 ARID2Q68CP9 1835 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 ZNF195O14628 629 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 INMTO95050 263 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 C1QAP02745 245 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 SLC35E2P0CK97 266 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 ARRB2P32121 409 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 GFOD2Q3B7J2 385 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 YIPF7Q8N8F6 280 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 BAHD1Q8TBE0 780 aaPredicted RBP14.15□□□□□ -0.14
USP47-207ENST00000527733 PIK3R3Q92569 461 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 CCDC74AQ96AQ1 378 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 COX4I2Q96KJ9 171 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 LYRM4Q9HD34 91 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 TNFRSF12AQ9NP84 129 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 MMACHCQ9Y4U1 282 aa14.15□□□□□ -0.14
USP47-207ENST00000527733 OTOL1A6NHN0 477 aaPredicted RBP14.14□□□□□ -0.15
USP47-207ENST00000527733 ANXA2P2A6NMY6 339 aa14.14□□□□□ -0.15
USP47-207ENST00000527733 DENRO43583 198 aaKnown RBP14.14□□□□□ -0.15
USP47-207ENST00000527733 RPP14O95059 124 aaKnown RBP14.14□□□□□ -0.15
USP47-207ENST00000527733 B3GALT4O96024 378 aa14.14□□□□□ -0.15
USP47-207ENST00000527733 ANXA2P07355 339 aaKnown RBP14.14□□□□□ -0.15
USP47-207ENST00000527733 OSMP13725 252 aa14.14□□□□□ -0.15
USP47-207ENST00000527733 ROR2Q01974 943 aaKnown RBP14.14□□□□□ -0.15
USP47-207ENST00000527733 FGL2Q14314 439 aa14.14□□□□□ -0.15
USP47-207ENST00000527733 ARHGAP11AQ6P4F7 1023 aa14.14□□□□□ -0.15
USP47-207ENST00000527733 FAM86B1Q8N7N1 296 aa14.14□□□□□ -0.15
USP47-207ENST00000527733 NEURL3Q96EH8 262 aa14.14□□□□□ -0.15
USP47-207ENST00000527733 PRRC1Q96M27 445 aa14.14□□□□□ -0.15
USP47-207ENST00000527733 KCTD7Q96MP8 289 aa14.14□□□□□ -0.15
USP47-207ENST00000527733 TIGARQ9NQ88 270 aa14.14□□□□□ -0.15
USP47-207ENST00000527733 UBQLN4Q9NRR5 601 aa14.14□□□□□ -0.15
USP47-207ENST00000527733 RHBDL2Q9NX52 303 aa14.14□□□□□ -0.15
USP47-207ENST00000527733 MUTYHQ9UIF7 546 aa14.14□□□□□ -0.15
USP47-207ENST00000527733 ATG2BQ96BY7 2078 aa14.14□□□□□ -0.15
USP47-207ENST00000527733 PRKRAO75569 313 aaKnown RBP14.14□□□□□ -0.15
USP47-207ENST00000527733 SYNGR4O95473 234 aa14.14□□□□□ -0.15
USP47-207ENST00000527733 RAB36O95755 333 aa14.14□□□□□ -0.15
USP47-207ENST00000527733 HLA-DPB1P04440 258 aa14.14□□□□□ -0.15
USP47-207ENST00000527733 ST6GAL1P15907 406 aa14.14□□□□□ -0.15
USP47-207ENST00000527733 OR2B6P58173 313 aa14.14□□□□□ -0.15
USP47-207ENST00000527733 KLHL26Q53HC5 615 aa14.14□□□□□ -0.15
USP47-207ENST00000527733 COL13A1Q5TAT6 717 aaPredicted RBP14.14□□□□□ -0.15
USP47-207ENST00000527733 MAMDC2Q7Z304 686 aaPredicted RBP14.14□□□□□ -0.15
USP47-207ENST00000527733 WDR20Q8TBZ3 569 aa14.14□□□□□ -0.15
USP47-207ENST00000527733 OR1F2PQ96R84 312 aa14.14□□□□□ -0.15
USP47-207ENST00000527733 SLC29A1Q99808 456 aa14.14□□□□□ -0.15
USP47-207ENST00000527733 BRD7Q9NPI1 651 aa14.14□□□□□ -0.15
USP47-207ENST00000527733 SNTG1Q9NSN8 517 aa14.14□□□□□ -0.15
USP47-207ENST00000527733 MITFO75030 526 aaPredicted RBP14.14□□□□□ -0.15
USP47-207ENST00000527733 UBL4AP11441 157 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms