RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 DGCR6LQ9BY27 220 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 DRC3Q9H069 523 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 ILKAPQ9H0C8 392 aaPredicted RBP4.1□□□□□ -1.75
CD44-213ENST00000525209 L2HGDHQ9H9P8 463 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 CLK4Q9HAZ1 481 aaKnown RBP4.1□□□□□ -1.75
CD44-213ENST00000525209 SLC38A10Q9HBR0 1119 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 CD209Q9NNX6 404 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 CYSLTR2Q9NS75 346 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 SEMA4GQ9NTN9 838 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 C19orf73Q9NVV2 129 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 PTTG2Q9NZH5 202 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 IFNKQ9P0W0 207 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 LRWD1Q9UFC0 647 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 MIOXQ9UGB7 285 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 APOBEC3BQ9UH17 382 aaKnown RBP4.1□□□□□ -1.75
CD44-213ENST00000525209 IKZF2Q9UKS7 526 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 NR2E1Q9Y466 385 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 LRRC42Q9Y546 428 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 KCTD3Q9Y597 815 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 KPTNQ9Y664 436 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 GRIN2DO15399 1336 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 SNED1Q8TER0 1413 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 PTPRUQ92729 1446 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 PLEKHH2Q8IVE3 1493 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 KDM5DQ9BY66 1539 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 VWDEQ8N2E2 1590 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 REREQ9P2R6 1566 aa4.1□□□□□ -1.75
CD44-213ENST00000525209 XIRP1Q702N8 1843 aaKnown RBP4.09□□□□□ -1.75
CD44-213ENST00000525209 A0A0A6YYH2 397 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 A0A1B0GW15 77 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 SH3PXD2BA1X283 911 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 OR2M5A3KFT3 312 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 A6NJ64 397 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 GOLGA8JA6NMD2 632 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 C17orf105B2RV13 164 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 RNASEK-C17orf49H0YIS7 233 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 H3BTX0 84 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 RAB29O14966 203 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 LDB2O43679 373 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 CYTH3O43739 400 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 NDUFB4O95168 129 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 WDPCPO95876 746 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 CST4P01036 141 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 OCMP0CE72 109 aaPredicted RBP4.09□□□□□ -1.75
CD44-213ENST00000525209 TRIM49P0CI25 452 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 TRIM49CP0CI26 452 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 TSPAN8P19075 237 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 CD58P19256 250 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 GTF2E2P29084 291 aaKnown RBP4.09□□□□□ -1.75
CD44-213ENST00000525209 HMOX2P30519 316 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 HMGCLP35914 325 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 NPBWR2P48146 333 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 SOX2P48431 317 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 CSNK1DP48730 415 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 NPY2RP49146 381 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 COMPP49747 757 aaPredicted RBP4.09□□□□□ -1.75
CD44-213ENST00000525209 GTF2A1P52655 376 aaPredicted RBP4.09□□□□□ -1.75
CD44-213ENST00000525209 ACLYP53396 1101 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 OR2B6P58173 313 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 GLO1Q04760 184 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 RAD51Q06609 339 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 DLX2Q07687 328 aaPredicted RBP4.09□□□□□ -1.75
CD44-213ENST00000525209 PLA2G7Q13093 441 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 KNOP1Q1ED39 458 aaKnown RBP4.09□□□□□ -1.75
CD44-213ENST00000525209 ODF4Q2M2E3 257 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 EIF2S3LQ2VIR3 472 aaKnown RBP4.09□□□□□ -1.75
CD44-213ENST00000525209 GLYR1Q49A26 553 aaPredicted RBP4.09□□□□□ -1.75
CD44-213ENST00000525209 COQ5Q5HYK3 327 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 MANEAQ5SRI9 462 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 OTUD3Q5T2D3 398 aaPredicted RBP4.09□□□□□ -1.75
CD44-213ENST00000525209 FAM69BQ5VUD6 431 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 LYPLAL1Q5VWZ2 237 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 B3GNTL1Q67FW5 361 aaPredicted RBP4.09□□□□□ -1.75
CD44-213ENST00000525209 TIGD3Q6B0B8 471 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 NCAPH2Q6IBW4 605 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 OR52W1Q6IF63 320 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 FAM151BQ6UXP7 276 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 LRRC74BQ6ZQY2 392 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 LRRC55Q6ZSA7 311 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 TRMT1LQ7Z2T5 733 aaKnown RBP4.09□□□□□ -1.75
CD44-213ENST00000525209 PID1Q7Z2X4 250 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 FAM122BQ7Z309 247 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 RNF130Q86XS8 419 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 MMAAQ8IVH4 418 aaKnown RBP4.09□□□□□ -1.75
CD44-213ENST00000525209 CMTM8Q8IZV2 173 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 PELI3Q8N2H9 469 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 PARP8Q8N3A8 854 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 TMEM132CQ8N3T6 1108 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 MFSD9Q8NBP5 474 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 ZNF248Q8NDW4 579 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 ZNF548Q8NEK5 533 aaPredicted RBP4.09□□□□□ -1.75
CD44-213ENST00000525209 NFAM1Q8NET5 270 aaPredicted RBP4.09□□□□□ -1.75
CD44-213ENST00000525209 MDGA1Q8NFP4 955 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 OR6M1Q8NGM8 313 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 WDR36Q8NI36 951 aaKnown RBP4.09□□□□□ -1.75
CD44-213ENST00000525209 DNAAF4Q8WXU2 420 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 PHF21AQ96BD5 680 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 ZBTB9Q96C00 473 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 OTUB2Q96DC9 234 aa4.09□□□□□ -1.75
CD44-213ENST00000525209 MTERF3Q96E29 417 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms