RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	OR14C36	Q8NHC7	312 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	HUS1B	Q8NHY5	278 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	GPR151	Q8TDV0	419 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	UTP15	Q8TED0	518 aa	Known RBP	7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	C16orf78	Q8WTQ4	265 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	ZCCHC14	Q8WYQ9	949 aa	Known RBP	7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	RNF31	Q96EP0	1072 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	ZC3HAV1L	Q96H79	300 aa	Known RBP	7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	MTERF1	Q99551	399 aa	Known RBP	7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	PKP4	Q99569	1192 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	KCNS3	Q9BQ31	491 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	SOST	Q9BQB4	213 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	CLEC4M	Q9H2X3	399 aa	Predicted RBP	7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	RMI1	Q9H9A7	625 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	A4GALT	Q9NPC4	353 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	DMRT3	Q9NQL9	472 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	MRPS18A	Q9NVS2	196 aa	Known RBP	7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	C14orf119	Q9NWQ9	140 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	ERVK13-1	Q9NX77	482 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	SERGEF	Q9UGK8	458 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	RALY	Q9UKM9	306 aa	Known RBP	7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	ICK	Q9UPZ9	632 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	MGAT4B	Q9UQ53	548 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	HS3ST2	Q9Y278	367 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	SF3B6	Q9Y3B4	125 aa	Known RBP	7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	ABCA7	Q8IZY2	2146 aa		7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	MUC22	E2RYF6	1773 aa	Predicted RBP	7.36	□□□□□ -1.23
SPIDR-223	ENST00000524033	CNOT1	A5YKK6	2376 aa	Known RBP	7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	TRBV4-1	A0A0J9YWV2	114 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033		A0A1W2PPC4	97 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	MEIOC	A2RUB1	952 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	TMEM202	A6NGA9	273 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	FADS2P1	A8MWK0	482 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033		B4DXG7	233 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033		H0Y8X5	98 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	QSOX1	O00391	747 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	FAAH	O00519	579 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	TNFSF14	O43557	240 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	TRIM3	O75382	744 aa	Predicted RBP	7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	GAST	P01350	101 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	IFNA14	P01570	189 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	CSF3	P09919	207 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	MSL3P1	P0C860	447 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	CPE	P16870	476 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	ZNF30	P17039	623 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	ELAVL4	P26378	380 aa	Known RBP	7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	HLA-DMA	P28067	261 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	CD38	P28907	300 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	VIPR1	P32241	457 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	CRAT	P43155	626 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	MAPK9	P45984	424 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	OR1E2	P47887	323 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	PRLHR	P49683	370 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	RORC	P51449	518 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	CCR5	P51681	352 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	EFNB1	P98172	346 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	GALK2	Q01415	458 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	C19orf57	Q0VDD7	668 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	NAE1	Q13564	534 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	TP53BP2	Q13625	1128 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	RIN1	Q13671	783 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	MED22	Q15528	200 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	DUSP7	Q16829	419 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	TBRG1	Q3YBR2	411 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	ZFP69	Q49AA0	526 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	CCSMST1	Q4G0I0	132 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033		Q5BKY6	102 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	ZNF628	Q5EBL2	1059 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	PRAMEF14	Q5SWL7	426 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	HENMT1	Q5T8I9	393 aa	Known RBP	7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	FAM46C	Q5VWP2	391 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	MED27	Q6P2C8	311 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	TRIM40	Q6P9F5	258 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	XKRX	Q6PP77	449 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	CD300LD	Q6UXZ3	194 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	UNC5D	Q6UXZ4	953 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	C8orf86	Q6ZUL3	223 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	PTCHD4	Q6ZW05	846 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	IKBIP	Q70UQ0	350 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	COMMD6	Q7Z4G1	85 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	MRGPRE	Q86SM8	312 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	PHC2	Q8IXK0	858 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	LRRC56	Q8IYG6	542 aa	Predicted RBP	7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	TCTE3	Q8IZS6	198 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	TRAM1L1	Q8N609	369 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	GDPD1	Q8N9F7	314 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	OR52J3	Q8NH60	311 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	CDC26	Q8NHZ8	85 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	RASSF5	Q8WWW0	418 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	KLHL6	Q8WZ60	621 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	ELMO1	Q92556	727 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	TTC9	Q92623	222 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	SLC25A46	Q96AG3	418 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	ZNF764	Q96H86	408 aa	Predicted RBP	7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	TMEM80	Q96HE8	168 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	CEP19	Q96LK0	163 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	VPS35	Q96QK1	796 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	ORAI3	Q9BRQ5	295 aa		7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	WRAP53	Q9BUR4	548 aa	Known RBP	7.35	□□□□□ -1.23
SPIDR-223	ENST00000524033	CNPPD1	Q9BV87	410 aa		7.35	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 64 ms