RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 CRHP06850 196 aa23.4■■□□□ 1.34
PVT1-219ENST00000523427 KIR2DL2P43627 348 aaPredicted RBP23.4■■□□□ 1.34
PVT1-219ENST00000523427 GALNT1Q10472 559 aaPredicted RBP23.4■■□□□ 1.34
PVT1-219ENST00000523427 EXOC3L2Q2M3D2 409 aa23.4■■□□□ 1.34
PVT1-219ENST00000523427 RAET1LQ5VY80 246 aa23.4■■□□□ 1.34
PVT1-219ENST00000523427 MEIOBQ8N635 442 aa23.4■■□□□ 1.34
PVT1-219ENST00000523427 ZNF610Q8N9Z0 462 aa23.4■■□□□ 1.34
PVT1-219ENST00000523427 PPP1R14CQ8TAE6 165 aa23.4■■□□□ 1.34
PVT1-219ENST00000523427 DTNBP1Q96EV8 351 aa23.4■■□□□ 1.34
PVT1-219ENST00000523427 SLC35A4Q96G79 324 aa23.4■■□□□ 1.34
PVT1-219ENST00000523427 PINK1Q9BXM7 581 aa23.4■■□□□ 1.34
PVT1-219ENST00000523427 KLHL4Q9C0H6 718 aa23.4■■□□□ 1.34
PVT1-219ENST00000523427 DSN1Q9H410 356 aa23.4■■□□□ 1.34
PVT1-219ENST00000523427 RNF14Q9UBS8 474 aa23.4■■□□□ 1.34
PVT1-219ENST00000523427 CCDC189A1A4V9 331 aa23.39■■□□□ 1.33
PVT1-219ENST00000523427 B4DXG7 233 aa23.39■■□□□ 1.33
PVT1-219ENST00000523427 TSPAN2O60636 221 aa23.39■■□□□ 1.33
PVT1-219ENST00000523427 ABCB7O75027 752 aa23.39■■□□□ 1.33
PVT1-219ENST00000523427 ALDOAP04075 364 aaKnown RBP23.39■■□□□ 1.33
PVT1-219ENST00000523427 PEPDP12955 493 aa23.39■■□□□ 1.33
PVT1-219ENST00000523427 PTH2RP49190 550 aa23.39■■□□□ 1.33
PVT1-219ENST00000523427 SERPINB8P50452 374 aa23.39■■□□□ 1.33
PVT1-219ENST00000523427 B3GALT5-AS1P59052 145 aa23.39■■□□□ 1.33
PVT1-219ENST00000523427 EFR3AQ14156 821 aa23.39■■□□□ 1.33
PVT1-219ENST00000523427 METTL2BQ6P1Q9 378 aaKnown RBP23.39■■□□□ 1.33
PVT1-219ENST00000523427 C20orf204Q6ZNR8 217 aa23.39■■□□□ 1.33
PVT1-219ENST00000523427 C22orf34Q6ZV56 151 aa23.39■■□□□ 1.33
PVT1-219ENST00000523427 C1orf52Q8N6N3 182 aaKnown RBP23.39■■□□□ 1.33
PVT1-219ENST00000523427 OR9A2Q8NGT5 310 aa23.39■■□□□ 1.33
PVT1-219ENST00000523427 ZNF681Q96N22 645 aa23.39■■□□□ 1.33
PVT1-219ENST00000523427 PPP4R1LQ9P1A2 415 aa23.39■■□□□ 1.33
PVT1-219ENST00000523427 ADAM21Q9UKJ8 722 aa23.39■■□□□ 1.33
PVT1-219ENST00000523427 UTP11Q9Y3A2 253 aaKnown RBP23.39■■□□□ 1.33
PVT1-219ENST00000523427 PPP6CO00743 305 aa23.38■■□□□ 1.33
PVT1-219ENST00000523427 CT45A8P0DMV1 189 aa23.38■■□□□ 1.33
PVT1-219ENST00000523427 CT45A9P0DMV2 189 aa23.38■■□□□ 1.33
PVT1-219ENST00000523427 HK1P19367 917 aa23.38■■□□□ 1.33
PVT1-219ENST00000523427 SUCLG1P53597 346 aaKnown RBP23.38■■□□□ 1.33
PVT1-219ENST00000523427 STX5Q13190 355 aa23.38■■□□□ 1.33
PVT1-219ENST00000523427 BCL2A1Q16548 175 aa23.38■■□□□ 1.33
PVT1-219ENST00000523427 CT45A2Q5DJT8 189 aa23.38■■□□□ 1.33
PVT1-219ENST00000523427 PPP4R4Q6NUP7 873 aa23.38■■□□□ 1.33
PVT1-219ENST00000523427 NPSR1Q6W5P4 371 aa23.38■■□□□ 1.33
PVT1-219ENST00000523427 SPATA4Q8NEY3 305 aa23.38■■□□□ 1.33
PVT1-219ENST00000523427 OR4N2Q8NGD1 307 aa23.38■■□□□ 1.33
PVT1-219ENST00000523427 EXOSC8Q96B26 276 aaKnown RBP23.38■■□□□ 1.33
PVT1-219ENST00000523427 LRRC1Q9BTT6 524 aa23.38■■□□□ 1.33
PVT1-219ENST00000523427 ELOVL5Q9NYP7 299 aa23.38■■□□□ 1.33
PVT1-219ENST00000523427 MRPS18CQ9Y3D5 142 aaKnown RBP23.38■■□□□ 1.33
PVT1-219ENST00000523427 OR10H1Q9Y4A9 318 aa23.38■■□□□ 1.33
PVT1-219ENST00000523427 ATRQ13535 2644 aa23.38■■□□□ 1.33
PVT1-219ENST00000523427 SMIM24O75264 130 aa23.37■■□□□ 1.33
PVT1-219ENST00000523427 NID1P14543 1247 aa23.37■■□□□ 1.33
PVT1-219ENST00000523427 CDH13P55290 713 aa23.37■■□□□ 1.33
PVT1-219ENST00000523427 DSCR4P56555 118 aaPredicted RBP23.37■■□□□ 1.33
PVT1-219ENST00000523427 CLDN15P56746 228 aa23.37■■□□□ 1.33
PVT1-219ENST00000523427 ERCC6LQ2NKX8 1250 aa23.37■■□□□ 1.33
PVT1-219ENST00000523427 ZNF628Q5EBL2 1059 aa23.37■■□□□ 1.33
PVT1-219ENST00000523427 SH2D4BQ5SQS7 431 aa23.37■■□□□ 1.33
PVT1-219ENST00000523427 C10orf62Q5T681 223 aaPredicted RBP23.37■■□□□ 1.33
PVT1-219ENST00000523427 PLEKHM3Q6ZWE6 761 aa23.37■■□□□ 1.33
PVT1-219ENST00000523427 SLC44A2Q8IWA5 706 aaPredicted RBP23.37■■□□□ 1.33
PVT1-219ENST00000523427 FNDC9Q8TBE3 224 aa23.37■■□□□ 1.33
PVT1-219ENST00000523427 BTBD9Q96Q07 612 aa23.37■■□□□ 1.33
PVT1-219ENST00000523427 MED11Q9P086 117 aa23.37■■□□□ 1.33
PVT1-219ENST00000523427 XPR1Q9UBH6 696 aa23.37■■□□□ 1.33
PVT1-219ENST00000523427 PROCRQ9UNN8 238 aa23.37■■□□□ 1.33
PVT1-219ENST00000523427 ZNF337Q9Y3M9 751 aa23.37■■□□□ 1.33
PVT1-219ENST00000523427 USF3Q68DE3 2245 aa23.37■■□□□ 1.33
PVT1-219ENST00000523427 UQCRHLA0A096LP55 91 aa23.36■■□□□ 1.33
PVT1-219ENST00000523427 H3BML4 177 aa23.36■■□□□ 1.33
PVT1-219ENST00000523427 RBP1P09455 135 aa23.36■■□□□ 1.33
PVT1-219ENST00000523427 GAS1P54826 345 aa23.36■■□□□ 1.33
PVT1-219ENST00000523427 NR1H2P55055 460 aa23.36■■□□□ 1.33
PVT1-219ENST00000523427 CAV1Q03135 178 aa23.36■■□□□ 1.33
PVT1-219ENST00000523427 LETMD1Q6P1Q0 360 aa23.36■■□□□ 1.33
PVT1-219ENST00000523427 ZDHHC24Q6UX98 284 aa23.36■■□□□ 1.33
PVT1-219ENST00000523427 CXXC5Q7LFL8 322 aaKnown RBP23.36■■□□□ 1.33
PVT1-219ENST00000523427 FOLH1BQ9HBA9 442 aa23.36■■□□□ 1.33
PVT1-219ENST00000523427 HEATR5AQ86XA9 2040 aa23.35■■□□□ 1.33
PVT1-219ENST00000523427 STX16-NPEPL1H3BU86 382 aa23.35■■□□□ 1.33
PVT1-219ENST00000523427 STX16O14662 325 aa23.35■■□□□ 1.33
PVT1-219ENST00000523427 EMC8O43402 210 aa23.35■■□□□ 1.33
PVT1-219ENST00000523427 BCAS2O75934 225 aaPredicted RBP23.35■■□□□ 1.33
PVT1-219ENST00000523427 IL3P08700 152 aa23.35■■□□□ 1.33
PVT1-219ENST00000523427 EEFSECP57772 596 aaKnown RBP23.35■■□□□ 1.33
PVT1-219ENST00000523427 PON3Q15166 354 aa23.35■■□□□ 1.33
PVT1-219ENST00000523427 MARK4Q96L34 752 aa23.35■■□□□ 1.33
PVT1-219ENST00000523427 VSTM2LQ96N03 204 aa23.35■■□□□ 1.33
PVT1-219ENST00000523427 GSX2Q9BZM3 304 aa23.35■■□□□ 1.33
PVT1-219ENST00000523427 NMRK1Q9NWW6 199 aa23.35■■□□□ 1.33
PVT1-219ENST00000523427 SENP1Q9P0U3 644 aa23.35■■□□□ 1.33
PVT1-219ENST00000523427 SNX6Q9UNH7 406 aa23.35■■□□□ 1.33
PVT1-219ENST00000523427 GMFGO60234 142 aa23.34■■□□□ 1.33
PVT1-219ENST00000523427 CGAP01215 116 aa23.34■■□□□ 1.33
PVT1-219ENST00000523427 TBXA2RP21731 343 aa23.34■■□□□ 1.33
PVT1-219ENST00000523427 LOXP28300 417 aaPredicted RBP23.34■■□□□ 1.33
PVT1-219ENST00000523427 PNLIPRP2P54317 469 aa23.34■■□□□ 1.33
PVT1-219ENST00000523427 CLDN20P56880 219 aa23.34■■□□□ 1.33
PVT1-219ENST00000523427 GGTA1PQ4G0N0 100 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms